Wall clock time and date at job start Sat Mar 6 2021 23:48:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86299 * 109.47420 * 2 1 4 4 C 1.50705 * 109.47378 * 239.99878 * 2 1 3 5 5 C 1.37860 * 119.88584 * 299.98170 * 4 2 1 6 6 C 1.39663 * 119.87089 * 179.97438 * 5 4 2 7 7 C 1.47695 * 120.16326 * 180.02562 * 6 5 4 8 8 O 1.21565 * 120.00216 * 180.02562 * 7 6 5 9 9 N 1.34777 * 119.99900 * 359.97438 * 7 6 5 10 10 C 1.46507 * 120.00122 * 174.79601 * 9 7 6 11 11 C 1.50703 * 112.84728 * 76.02756 * 10 9 7 12 12 C 1.38227 * 119.99674 * 184.86370 * 11 10 9 13 13 C 1.38234 * 119.99927 * 179.74459 * 12 11 10 14 14 C 1.38238 * 120.00162 * 0.55098 * 13 12 11 15 15 C 1.38240 * 119.99408 * 359.70498 * 14 13 12 16 16 C 1.38229 * 119.99973 * 5.13839 * 11 10 9 17 17 C 1.53778 * 113.61152 * 304.83455 * 10 9 7 18 18 C 1.53777 * 87.07869 * 270.88273 * 17 10 9 19 19 H 1.09008 * 113.61405 * 220.01921 * 18 17 10 20 20 O 1.42900 * 113.61734 * 89.12251 * 18 17 10 21 21 C 1.53776 * 113.61505 * 207.33483 * 10 9 7 22 22 C 1.39821 * 119.67131 * 359.75038 * 6 5 4 23 23 F 1.35100 * 120.11145 * 180.25248 * 22 6 5 24 24 C 1.38321 * 119.77800 * 0.52008 * 22 6 5 25 25 C 1.38212 * 120.11687 * 359.47740 * 24 22 6 26 26 H 0.96700 * 113.99858 * 60.00145 * 1 2 3 27 27 H 1.09003 * 109.47179 * 119.99872 * 2 1 3 28 28 H 1.48502 * 109.99988 * 298.67894 * 3 2 1 29 29 H 1.48498 * 109.99718 * 59.99815 * 3 2 1 30 30 H 1.07993 * 120.06495 * 359.97438 * 5 4 2 31 31 H 0.97005 * 120.00145 * 354.79728 * 9 7 6 32 32 H 1.08003 * 120.00493 * 0.02562 * 12 11 10 33 33 H 1.08003 * 120.00390 * 180.27792 * 13 12 11 34 34 H 1.07997 * 120.00689 * 179.72368 * 14 13 12 35 35 H 1.07997 * 119.99551 * 180.02562 * 15 14 13 36 36 H 1.08001 * 120.00363 * 359.97438 * 16 11 10 37 37 H 1.08997 * 113.61512 * 25.42811 * 17 10 9 38 38 H 1.08998 * 113.61186 * 156.25116 * 17 10 9 39 39 H 0.96701 * 114.00326 * 180.02562 * 20 18 17 40 40 H 1.09000 * 113.61565 * 203.66066 * 21 10 9 41 41 H 1.09000 * 113.61688 * 334.57137 * 21 10 9 42 42 H 1.07996 * 119.94548 * 179.75538 * 24 22 6 43 43 H 1.08002 * 119.83006 * 180.22948 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5972 -2.0304 -1.4461 6 6 2.0626 -2.6884 -2.5868 7 6 1.7081 -4.1023 -2.8245 8 8 2.1151 -4.6723 -3.8181 9 7 0.9342 -4.7610 -1.9392 10 6 0.4882 -6.1260 -2.2295 11 6 1.5765 -7.1505 -2.0370 12 6 1.3466 -8.4732 -2.3663 13 6 2.3466 -9.4120 -2.1947 14 6 3.5728 -9.0303 -1.6832 15 6 3.8009 -7.7084 -1.3489 16 6 2.8028 -6.7686 -1.5259 17 6 -0.2536 -6.2597 -3.5698 18 6 -1.5451 -5.9453 -2.7965 19 1 -2.4006 -6.5414 -3.1144 20 8 -1.8390 -4.5491 -2.7166 21 6 -0.8388 -6.4986 -1.5476 22 6 2.8609 -2.0002 -3.5055 23 9 3.3116 -2.6265 -4.6145 24 6 3.1922 -0.6776 -3.2724 25 6 2.7268 -0.0352 -2.1406 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5880 2.4585 -1.2243 29 1 1.5615 2.4678 1.2085 30 1 0.9769 -2.5547 -0.7344 31 1 0.6724 -4.3313 -1.1099 32 1 0.3872 -8.7724 -2.7618 33 1 2.1685 -10.4447 -2.4561 34 1 4.3526 -9.7645 -1.5449 35 1 4.7590 -7.4101 -0.9497 36 1 2.9811 -5.7359 -1.2649 37 1 0.0171 -5.4943 -4.2970 38 1 -0.2263 -7.2670 -3.9854 39 1 -2.6500 -4.3450 -2.2310 40 1 -0.9726 -7.5716 -1.4097 41 1 -1.0404 -5.9260 -0.6423 42 1 3.8119 -0.1447 -3.9782 43 1 2.9853 0.9986 -1.9650 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_12335834.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:48:16 Heat of formation + Delta-G solvation = -57.893708 kcal Electronic energy + Delta-G solvation = -30732.801323 eV Core-core repulsion = 26432.595322 eV Total energy + Delta-G solvation = -4300.206001 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.126 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -49.79999 -42.17384 -40.76855 -39.45469 -39.10112 -37.65089 -36.23483 -34.30686 -32.54516 -32.28387 -31.59766 -31.51747 -27.02225 -26.72661 -26.28280 -25.04064 -23.57618 -23.10553 -22.33532 -21.51426 -20.24763 -19.30228 -18.67697 -18.37668 -18.18797 -17.90217 -17.34879 -16.76032 -16.66186 -16.40928 -16.27446 -16.12417 -15.70448 -15.65883 -15.45662 -15.22024 -15.02027 -14.70184 -14.38758 -14.30905 -14.21517 -13.97920 -13.64075 -13.56024 -13.30852 -13.15514 -12.97437 -12.79968 -12.38608 -12.35233 -12.17556 -11.88287 -11.82198 -11.48204 -11.03983 -10.94050 -10.62927 -10.34527 -10.01295 -9.80681 -9.73704 -9.50466 -5.08355 -0.45503 -0.06311 0.48480 0.58335 1.13013 1.47495 1.73349 1.85643 1.97354 2.55130 2.84198 3.01210 3.06430 3.18475 3.37266 3.38875 3.47201 3.52375 3.59886 3.68292 3.80184 3.92587 4.04037 4.11037 4.16131 4.25538 4.31676 4.34264 4.49596 4.55777 4.61230 4.65900 4.69796 4.72895 4.77960 4.84008 4.90204 4.94756 5.07033 5.10848 5.12446 5.18248 5.44632 5.57691 5.63223 5.70235 5.81656 6.15298 6.24852 6.46472 6.60350 7.24992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.072 4.072 3 Si 0.683 3.317 4 C -0.140 4.140 5 C -0.029 4.029 6 C -0.171 4.171 7 C 0.564 3.436 8 O -0.509 6.509 9 N -0.695 5.695 10 C 0.200 3.800 11 C -0.076 4.076 12 C -0.114 4.114 13 C -0.117 4.117 14 C -0.121 4.121 15 C -0.118 4.118 16 C -0.100 4.100 17 C -0.128 4.128 18 C 0.079 3.921 19 H 0.074 0.926 20 O -0.544 6.544 21 C -0.163 4.163 22 C 0.166 3.834 23 F -0.111 7.111 24 C -0.157 4.157 25 C -0.061 4.061 26 H 0.378 0.622 27 H 0.122 0.878 28 H -0.257 1.257 29 H -0.254 1.254 30 H 0.138 0.862 31 H 0.402 0.598 32 H 0.122 0.878 33 H 0.123 0.877 34 H 0.122 0.878 35 H 0.121 0.879 36 H 0.114 0.886 37 H 0.092 0.908 38 H 0.106 0.894 39 H 0.380 0.620 40 H 0.107 0.893 41 H 0.082 0.918 42 H 0.149 0.851 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.135 1.226 4.178 4.499 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.182 4.182 3 Si 0.584 3.416 4 C -0.140 4.140 5 C -0.048 4.048 6 C -0.175 4.175 7 C 0.351 3.649 8 O -0.385 6.385 9 N -0.347 5.347 10 C 0.113 3.887 11 C -0.077 4.077 12 C -0.132 4.132 13 C -0.135 4.135 14 C -0.139 4.139 15 C -0.136 4.136 16 C -0.118 4.118 17 C -0.166 4.166 18 C 0.020 3.980 19 H 0.092 0.908 20 O -0.350 6.350 21 C -0.201 4.201 22 C 0.146 3.854 23 F -0.089 7.089 24 C -0.176 4.176 25 C -0.079 4.079 26 H 0.226 0.774 27 H 0.140 0.860 28 H -0.182 1.182 29 H -0.179 1.179 30 H 0.156 0.844 31 H 0.238 0.762 32 H 0.140 0.860 33 H 0.141 0.859 34 H 0.140 0.860 35 H 0.139 0.861 36 H 0.132 0.868 37 H 0.110 0.890 38 H 0.124 0.876 39 H 0.227 0.773 40 H 0.125 0.875 41 H 0.101 0.899 42 H 0.167 0.833 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.417 1.364 3.605 3.877 hybrid contribution -1.507 -0.117 0.006 1.512 sum -1.924 1.247 3.611 4.278 Atomic orbital electron populations 1.86605 1.17414 1.79951 1.49477 1.25010 0.84175 1.11073 0.97958 0.95032 0.91605 0.74270 0.80712 1.20264 1.00739 0.94899 0.98114 1.21012 0.95496 0.93640 0.94633 1.20089 1.04369 0.95322 0.97760 1.17861 0.78431 0.85335 0.83311 1.90877 1.51953 1.68021 1.27608 1.45292 1.52558 1.14361 1.22488 1.19826 0.90729 0.80578 0.97607 1.19780 0.94927 0.93727 0.99252 1.20863 0.99491 0.92255 1.00590 1.21121 0.93484 0.99480 0.99450 1.21188 0.97327 0.96213 0.99176 1.21162 0.99016 0.93381 1.00025 1.20895 0.92891 0.99245 0.98806 1.23466 0.92671 1.03803 0.96634 1.22731 0.96966 0.82801 0.95530 0.90778 1.86529 1.47649 1.22256 1.78518 1.24061 0.94063 1.03013 0.98977 1.17756 0.93764 0.90576 0.83339 1.91631 1.86153 1.82154 1.48938 1.21157 1.03549 0.92994 0.99922 1.21075 0.94692 0.99743 0.92365 0.77414 0.85982 1.18204 1.17894 0.84419 0.76182 0.86013 0.85866 0.86032 0.86126 0.86773 0.88951 0.87559 0.77254 0.87484 0.89934 0.83321 0.84134 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.46 12.76 -35.23 -0.45 0.01 16 2 C -0.07 0.17 2.82 36.01 0.10 0.27 16 3 Si 0.68 -1.79 29.78 -169.99 -5.06 -6.85 16 4 C -0.14 0.22 5.39 -104.68 -0.56 -0.34 16 5 C -0.03 0.02 9.09 -39.19 -0.36 -0.34 16 6 C -0.17 -0.34 5.88 -104.91 -0.62 -0.96 16 7 C 0.56 2.08 6.18 -12.40 -0.08 2.00 16 8 O -0.51 -3.80 13.58 5.31 0.07 -3.73 16 9 N -0.69 -0.65 3.62 -48.90 -0.18 -0.83 16 10 C 0.20 0.20 0.97 -132.16 -0.13 0.07 16 11 C -0.08 -0.17 5.06 -104.63 -0.53 -0.70 16 12 C -0.11 -0.16 8.43 -39.59 -0.33 -0.50 16 13 C -0.12 -0.17 10.05 -39.58 -0.40 -0.57 16 14 C -0.12 -0.23 10.05 -39.58 -0.40 -0.62 16 15 C -0.12 -0.29 10.05 -39.58 -0.40 -0.69 16 16 C -0.10 -0.31 9.00 -39.58 -0.36 -0.66 16 17 C -0.13 -0.21 6.53 -25.92 -0.17 -0.38 16 18 C 0.08 -0.06 5.28 -25.92 -0.14 -0.20 16 19 H 0.07 -0.16 8.14 -51.92 -0.42 -0.59 16 20 O -0.54 0.07 13.09 -35.23 -0.46 -0.39 16 21 C -0.16 0.26 7.11 -25.92 -0.18 0.08 16 22 C 0.17 0.44 7.29 -38.96 -0.28 0.15 16 23 F -0.11 -0.61 15.55 2.25 0.04 -0.57 16 24 C -0.16 0.06 10.01 -39.56 -0.40 -0.34 16 25 C -0.06 0.12 8.66 -39.51 -0.34 -0.23 16 26 H 0.38 -1.25 8.70 45.56 0.40 -0.86 16 27 H 0.12 -0.39 7.96 -51.93 -0.41 -0.81 16 28 H -0.26 0.17 7.11 56.52 0.40 0.57 16 29 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 30 H 0.14 -0.31 6.42 -52.49 -0.34 -0.65 16 31 H 0.40 -0.53 6.81 -40.82 -0.28 -0.81 16 32 H 0.12 -0.09 6.74 -52.48 -0.35 -0.44 16 33 H 0.12 -0.06 8.06 -52.48 -0.42 -0.49 16 34 H 0.12 0.01 8.06 -52.49 -0.42 -0.42 16 35 H 0.12 0.11 8.06 -52.49 -0.42 -0.32 16 36 H 0.11 0.32 6.53 -52.49 -0.34 -0.03 16 37 H 0.09 0.46 6.67 -51.93 -0.35 0.11 16 38 H 0.11 0.05 6.66 -51.93 -0.35 -0.30 16 39 H 0.38 -1.57 9.12 45.56 0.42 -1.16 16 40 H 0.11 -0.27 7.29 -51.93 -0.38 -0.65 16 41 H 0.08 -0.20 8.13 -51.93 -0.42 -0.62 16 42 H 0.15 -0.34 8.06 -52.49 -0.42 -0.76 16 43 H 0.14 -0.58 4.86 -52.49 -0.25 -0.84 16 LS Contribution 356.68 15.07 5.38 5.38 Total: 0.00 -9.61 356.68 -10.20 -19.82 By element: Atomic # 1 Polarization: -4.90 SS G_CDS: -3.97 Total: -8.87 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -5.56 Total: -3.96 kcal Atomic # 7 Polarization: -0.65 SS G_CDS: -0.18 Total: -0.83 kcal Atomic # 8 Polarization: -3.27 SS G_CDS: -0.84 Total: -4.11 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 0.04 Total: -0.57 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: -5.06 Total: -6.85 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -9.61 -10.20 -19.82 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_12335834.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.077 kcal (2) G-P(sol) polarization free energy of solvation -9.613 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.690 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.204 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds