Wall clock time and date at job start Sat Mar 6 2021 23:48:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86293 * 109.47563 * 2 1 4 4 C 1.50709 * 109.46538 * 119.99705 * 2 1 3 5 5 C 1.37939 * 119.92003 * 65.32382 * 4 2 1 6 6 C 1.39607 * 119.86989 * 180.27012 * 5 4 2 7 7 C 1.47842 * 120.13779 * 179.69414 * 6 5 4 8 8 O 1.21552 * 120.00225 * 359.73538 * 7 6 5 9 9 N 1.34776 * 119.99817 * 180.02562 * 7 6 5 10 10 C 1.46504 * 120.00006 * 174.50083 * 9 7 6 11 11 C 1.50697 * 112.85477 * 293.06882 * 10 9 7 12 12 C 1.38234 * 120.00025 * 164.71645 * 11 10 9 13 13 C 1.38236 * 119.99715 * 179.78533 * 12 11 10 14 14 C 1.38237 * 119.99945 * 0.46676 * 13 12 11 15 15 C 1.38240 * 119.99934 * 359.77004 * 14 13 12 16 16 C 1.38232 * 119.99948 * 0.02562 * 15 14 13 17 17 C 1.53782 * 113.61239 * 161.75751 * 10 9 7 18 18 C 1.53783 * 87.08538 * 270.88954 * 17 10 9 19 19 H 1.09001 * 113.69149 * 220.01345 * 18 17 10 20 20 O 1.42895 * 113.61612 * 89.11331 * 18 17 10 21 21 C 1.53789 * 113.60982 * 64.26491 * 10 9 7 22 22 C 1.39545 * 119.71700 * 359.42760 * 6 5 4 23 23 C 1.38074 * 119.84590 * 0.27267 * 22 6 5 24 24 Br 1.89094 * 119.93743 * 179.97438 * 23 22 6 25 25 C 1.38360 * 119.91825 * 244.99596 * 4 2 1 26 26 H 0.96699 * 113.99788 * 300.00591 * 1 2 3 27 27 H 1.08997 * 109.47142 * 239.99211 * 2 1 3 28 28 H 1.48505 * 109.99557 * 299.99602 * 3 2 1 29 29 H 1.48497 * 110.00121 * 61.31316 * 3 2 1 30 30 H 1.07997 * 120.07117 * 359.97438 * 5 4 2 31 31 H 0.96999 * 120.00524 * 354.50810 * 9 7 6 32 32 H 1.07993 * 119.99865 * 0.02562 * 12 11 10 33 33 H 1.08001 * 120.00116 * 180.25310 * 13 12 11 34 34 H 1.08001 * 119.99942 * 179.78132 * 14 13 12 35 35 H 1.08000 * 119.99593 * 179.97438 * 15 14 13 36 36 H 1.07998 * 119.99619 * 179.97438 * 16 15 14 37 37 H 1.08997 * 113.61477 * 25.43686 * 17 10 9 38 38 H 1.09002 * 113.61385 * 156.33545 * 17 10 9 39 39 H 0.96704 * 113.99762 * 82.50158 * 20 18 17 40 40 H 1.08992 * 113.61211 * 203.65921 * 21 10 9 41 41 H 1.08997 * 113.61506 * 334.56625 * 21 10 9 42 42 H 1.07997 * 120.06994 * 180.29378 * 22 6 5 43 43 H 1.07997 * 119.86363 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.6899 -2.0587 1.3933 6 6 2.1507 -2.7146 2.5364 7 6 1.8895 -4.1581 2.7200 8 8 1.2683 -4.7754 1.8771 9 7 2.3352 -4.7883 3.8249 10 6 1.9745 -6.1877 4.0657 11 6 0.5036 -6.3751 4.3344 12 6 -0.0558 -7.6374 4.2681 13 6 -1.4042 -7.8098 4.5190 14 6 -2.1951 -6.7186 4.8266 15 6 -1.6366 -5.4555 4.8881 16 6 -0.2873 -5.2837 4.6414 17 6 2.8838 -6.8911 5.0872 18 6 3.7874 -7.2723 3.9026 19 1 4.1880 -8.2841 3.9652 20 8 4.7888 -6.2960 3.6092 21 6 2.5373 -7.1586 3.0142 22 6 2.8637 -2.0030 3.5021 23 6 3.1040 -0.6550 3.3244 24 35 4.0692 0.3119 4.6317 25 6 2.6391 -0.0100 2.1912 26 1 -0.3933 0.4418 0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 1.5617 2.4677 -1.2086 29 1 1.5880 2.4585 1.2241 30 1 1.1414 -2.6051 0.6403 31 1 2.8948 -4.3154 4.4606 32 1 0.5614 -8.4894 4.0242 33 1 -1.8406 -8.7966 4.4712 34 1 -3.2493 -6.8528 5.0191 35 1 -2.2546 -4.6030 5.1280 36 1 0.1489 -4.2969 4.6890 37 1 3.3556 -6.2089 5.7944 38 1 2.4150 -7.7474 5.5721 39 1 5.5775 -6.3624 4.1648 40 1 1.9739 -8.0880 2.9324 41 1 2.7293 -6.6923 2.0479 42 1 3.2269 -2.5057 4.3863 43 1 2.8295 1.0445 2.0566 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_12335870.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:48:44 Heat of formation + Delta-G solvation = -11.579603 kcal Electronic energy + Delta-G solvation = -29956.729948 eV Core-core repulsion = 25788.168251 eV Total energy + Delta-G solvation = -4168.561698 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.046 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.24659 -41.01259 -39.47185 -39.15889 -37.78393 -36.28653 -34.40428 -33.62629 -32.74979 -31.65492 -31.62043 -30.47866 -27.12115 -27.04448 -26.35747 -24.79339 -23.45301 -22.82346 -22.46936 -21.50840 -20.27632 -19.24364 -18.66810 -18.14359 -17.73508 -17.54673 -17.20786 -16.63010 -16.43812 -16.36679 -15.87225 -15.67523 -15.53530 -15.39986 -15.18629 -14.94417 -14.62892 -14.33888 -14.28174 -14.17743 -13.94918 -13.59035 -13.35889 -13.24411 -13.00233 -12.92852 -12.42452 -12.27163 -12.22206 -11.96514 -11.89575 -11.80497 -11.53404 -11.43152 -11.06844 -10.94360 -10.67559 -10.31579 -10.05177 -9.91673 -9.77457 -9.53737 -5.05859 -0.47848 -0.16698 0.40265 0.45065 0.54552 1.14308 1.48791 1.64139 1.86214 1.95395 2.54073 2.81120 2.98240 3.19693 3.29858 3.36152 3.40271 3.53613 3.65160 3.72027 3.79590 3.87092 3.96557 4.06203 4.12244 4.20711 4.21650 4.26324 4.31340 4.50862 4.53372 4.58761 4.62107 4.68109 4.72913 4.77938 4.91009 4.94561 5.06366 5.07753 5.10367 5.15353 5.36861 5.42861 5.59665 5.66881 5.76681 6.11711 6.29740 6.42747 6.57403 7.18961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.682 3.318 4 C -0.117 4.117 5 C -0.017 4.017 6 C -0.125 4.125 7 C 0.565 3.435 8 O -0.515 6.515 9 N -0.696 5.696 10 C 0.199 3.801 11 C -0.074 4.074 12 C -0.112 4.112 13 C -0.116 4.116 14 C -0.120 4.120 15 C -0.117 4.117 16 C -0.104 4.104 17 C -0.162 4.162 18 C 0.079 3.921 19 H 0.075 0.925 20 O -0.545 6.545 21 C -0.130 4.130 22 C -0.052 4.052 23 C -0.094 4.094 24 Br -0.034 7.034 25 C -0.067 4.067 26 H 0.377 0.623 27 H 0.125 0.875 28 H -0.251 1.251 29 H -0.256 1.256 30 H 0.147 0.853 31 H 0.402 0.598 32 H 0.123 0.877 33 H 0.124 0.876 34 H 0.122 0.878 35 H 0.120 0.880 36 H 0.114 0.886 37 H 0.082 0.918 38 H 0.107 0.893 39 H 0.381 0.619 40 H 0.106 0.894 41 H 0.091 0.909 42 H 0.138 0.862 43 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.770 -0.818 3.922 5.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.582 3.418 4 C -0.119 4.119 5 C -0.036 4.036 6 C -0.129 4.129 7 C 0.352 3.648 8 O -0.391 6.391 9 N -0.347 5.347 10 C 0.112 3.888 11 C -0.075 4.075 12 C -0.130 4.130 13 C -0.134 4.134 14 C -0.139 4.139 15 C -0.135 4.135 16 C -0.122 4.122 17 C -0.200 4.200 18 C 0.020 3.980 19 H 0.093 0.907 20 O -0.350 6.350 21 C -0.168 4.168 22 C -0.073 4.073 23 C -0.174 4.174 24 Br 0.052 6.948 25 C -0.086 4.086 26 H 0.225 0.775 27 H 0.143 0.857 28 H -0.175 1.175 29 H -0.180 1.180 30 H 0.165 0.835 31 H 0.239 0.761 32 H 0.141 0.859 33 H 0.142 0.858 34 H 0.140 0.860 35 H 0.138 0.862 36 H 0.132 0.868 37 H 0.101 0.899 38 H 0.125 0.875 39 H 0.228 0.772 40 H 0.125 0.875 41 H 0.110 0.890 42 H 0.155 0.845 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 3.118 -0.183 2.814 4.204 hybrid contribution -0.630 -0.262 1.114 1.306 sum 2.487 -0.444 3.928 4.671 Atomic orbital electron populations 1.86650 1.17191 1.79891 1.49290 1.25057 0.84318 1.11097 0.97896 0.95019 0.91595 0.74283 0.80882 1.20293 0.99915 0.94478 0.97192 1.21298 0.93633 0.93101 0.95600 1.19988 1.02493 0.93816 0.96595 1.18003 0.79051 0.86137 0.81602 1.90829 1.39627 1.66800 1.41796 1.45358 1.53252 1.11630 1.24495 1.19827 0.90099 0.81511 0.97320 1.19718 0.94215 0.93805 0.99748 1.20902 0.95318 0.96332 1.00476 1.21135 0.93767 0.99010 0.99533 1.21192 0.99949 0.92815 0.99896 1.21149 0.95027 0.97434 0.99918 1.20884 0.93810 0.98234 0.99318 1.24046 0.97561 1.01378 0.97054 1.22735 0.88627 0.91679 0.94987 0.90721 1.86525 1.29979 1.55746 1.62774 1.23520 0.94080 0.99729 0.99495 1.21283 0.95337 0.92283 0.98382 1.21629 1.04105 0.95039 0.96581 1.96835 1.72535 1.73586 1.51876 1.21252 0.95297 1.00229 0.91839 0.77538 0.85713 1.17511 1.18029 0.83480 0.76123 0.85884 0.85825 0.86020 0.86158 0.86796 0.89924 0.87456 0.77185 0.87544 0.89036 0.84472 0.84087 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.54 12.84 -35.23 -0.45 -1.00 16 2 C -0.07 0.04 2.80 36.01 0.10 0.14 16 3 Si 0.68 -0.93 29.87 -169.99 -5.08 -6.01 16 4 C -0.12 0.02 5.34 -104.68 -0.56 -0.54 16 5 C -0.02 -0.02 9.23 -39.18 -0.36 -0.39 16 6 C -0.12 -0.14 5.87 -104.97 -0.62 -0.76 16 7 C 0.57 1.48 6.24 -12.33 -0.08 1.40 16 8 O -0.51 -3.17 14.83 5.32 0.08 -3.09 16 9 N -0.70 -0.14 3.73 -48.85 -0.18 -0.32 16 10 C 0.20 0.06 0.93 -132.15 -0.12 -0.06 16 11 C -0.07 -0.13 4.79 -104.63 -0.50 -0.63 16 12 C -0.11 -0.13 8.82 -39.58 -0.35 -0.48 16 13 C -0.12 -0.14 10.05 -39.58 -0.40 -0.54 16 14 C -0.12 -0.19 10.05 -39.58 -0.40 -0.59 16 15 C -0.12 -0.25 10.05 -39.58 -0.40 -0.65 16 16 C -0.10 -0.26 8.94 -39.59 -0.35 -0.61 16 17 C -0.16 0.36 7.13 -25.92 -0.18 0.17 16 18 C 0.08 -0.12 5.28 -25.91 -0.14 -0.26 16 19 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 20 O -0.55 0.55 13.09 -35.23 -0.46 0.09 16 21 C -0.13 -0.10 6.57 -25.91 -0.17 -0.27 16 22 C -0.05 0.03 9.28 -39.15 -0.36 -0.33 16 23 C -0.09 0.03 6.22 -39.57 -0.25 -0.21 16 24 Br -0.03 0.02 33.69 -68.01 -2.29 -2.28 16 25 C -0.07 0.04 8.40 -39.47 -0.33 -0.29 16 26 H 0.38 -0.70 8.70 45.56 0.40 -0.31 16 27 H 0.13 -0.16 7.96 -51.93 -0.41 -0.57 16 28 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 29 H -0.26 -0.07 7.00 56.52 0.40 0.33 16 30 H 0.15 0.36 7.65 -52.49 -0.40 -0.04 16 31 H 0.40 -0.78 6.72 -40.82 -0.27 -1.06 16 32 H 0.12 -0.11 6.42 -52.49 -0.34 -0.45 16 33 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 34 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 35 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 36 H 0.11 0.22 6.77 -52.49 -0.36 -0.14 16 37 H 0.08 -0.26 8.09 -51.93 -0.42 -0.68 16 38 H 0.11 -0.31 7.86 -51.93 -0.41 -0.72 16 39 H 0.38 -1.91 9.12 45.56 0.42 -1.50 16 40 H 0.11 -0.05 6.12 -51.93 -0.32 -0.37 16 41 H 0.09 0.34 7.10 -51.93 -0.37 -0.02 16 42 H 0.14 -0.36 6.42 -52.49 -0.34 -0.70 16 43 H 0.14 -0.27 4.82 -52.49 -0.25 -0.52 16 LS Contribution 374.22 15.07 5.64 5.64 Total: 0.00 -8.43 374.22 -12.18 -20.61 By element: Atomic # 1 Polarization: -4.78 SS G_CDS: -3.97 Total: -8.75 kcal Atomic # 6 Polarization: 0.57 SS G_CDS: -5.47 Total: -4.90 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.18 Total: -0.32 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.83 Total: -4.00 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.08 Total: -6.01 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -8.43 -12.18 -20.61 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_12335870.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.033 kcal (2) G-P(sol) polarization free energy of solvation -8.429 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.604 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.580 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds