Wall clock time and date at job start Sat Mar 6 2021 23:48:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86304 * 109.46864 * 2 1 4 4 C 1.50703 * 109.47108 * 119.99825 * 2 1 3 5 5 C 1.38184 * 119.84301 * 255.02500 * 4 2 1 6 6 C 1.38310 * 120.14551 * 179.74035 * 5 4 2 7 7 F 1.35095 * 120.08745 * 180.27185 * 6 5 4 8 8 C 1.39807 * 119.82857 * 0.49159 * 6 5 4 9 9 C 1.47699 * 120.15095 * 179.76237 * 8 6 5 10 10 O 1.21569 * 120.00507 * 359.72579 * 9 8 6 11 11 N 1.34781 * 119.99595 * 179.72005 * 9 8 6 12 12 C 1.46505 * 119.99731 * 185.00077 * 11 9 8 13 13 C 1.50693 * 112.90784 * 66.52158 * 12 11 9 14 14 C 1.38234 * 119.99830 * 191.11918 * 13 12 11 15 15 C 1.38242 * 119.99645 * 179.76525 * 14 13 12 16 16 C 1.38234 * 120.00237 * 0.48461 * 15 14 13 17 17 C 1.38237 * 119.99876 * 359.78568 * 16 15 14 18 18 C 1.38232 * 119.99804 * 359.96361 * 17 16 15 19 19 C 1.53777 * 113.61107 * 295.26746 * 12 11 9 20 20 C 1.53780 * 87.17679 * 270.84289 * 19 12 11 21 21 H 1.08999 * 113.61724 * 220.06565 * 20 19 12 22 22 O 1.42898 * 113.61670 * 89.15742 * 20 19 12 23 23 C 1.53779 * 113.61065 * 197.77421 * 12 11 9 24 24 C 1.39656 * 119.69006 * 359.48873 * 8 6 5 25 25 C 1.38069 * 119.85375 * 0.27558 * 24 8 6 26 26 F 1.35090 * 119.91703 * 180.02562 * 25 24 8 27 27 H 0.96698 * 113.99917 * 300.00142 * 1 2 3 28 28 H 1.08999 * 109.47090 * 239.99999 * 2 1 3 29 29 H 1.48507 * 109.99578 * 178.67951 * 3 2 1 30 30 H 1.48499 * 109.99746 * 299.99716 * 3 2 1 31 31 H 1.07998 * 119.92636 * 0.02562 * 5 4 2 32 32 H 0.96998 * 120.00015 * 5.00322 * 11 9 8 33 33 H 1.07995 * 120.00252 * 359.97438 * 14 13 12 34 34 H 1.08002 * 119.99431 * 180.24710 * 15 14 13 35 35 H 1.07995 * 120.00075 * 179.76948 * 16 15 14 36 36 H 1.08000 * 120.00207 * 179.97438 * 17 16 15 37 37 H 1.08002 * 120.00182 * 179.97438 * 18 17 16 38 38 H 1.08997 * 113.62031 * 25.43362 * 19 12 11 39 39 H 1.09010 * 113.60967 * 156.25518 * 19 12 11 40 40 H 0.96699 * 114.00579 * 180.02562 * 22 20 19 41 41 H 1.08998 * 113.61234 * 203.66662 * 23 12 11 42 42 H 1.08999 * 113.61912 * 334.47805 * 23 12 11 43 43 H 1.08005 * 120.07193 * 180.25941 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4526 0.0199 2.2815 6 6 2.9105 -0.6253 3.4160 7 9 3.4148 0.0901 4.4450 8 6 2.8544 -2.0201 3.4932 9 6 3.3462 -2.7167 4.6992 10 8 3.8057 -2.0776 5.6256 11 7 3.2854 -4.0612 4.7726 12 6 3.6705 -4.7453 6.0096 13 6 2.7367 -4.4543 7.1560 14 6 3.0812 -4.8310 8.4406 15 6 2.2268 -4.5596 9.4930 16 6 1.0235 -3.9207 9.2593 17 6 0.6765 -3.5490 7.9738 18 6 1.5332 -3.8157 6.9223 19 6 5.1566 -4.5795 6.3681 20 6 5.4216 -5.8400 5.5280 21 1 6.1578 -6.5119 5.9690 22 8 5.6747 -5.5658 4.1486 23 6 3.9645 -6.2427 5.8193 24 6 2.3258 -2.7512 2.4271 25 6 1.8679 -2.0936 1.3028 26 9 1.3559 -2.7995 0.2711 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 3.5347 1.7703 0.0322 30 1 1.5615 2.4678 -1.2085 31 1 2.4983 1.0971 2.2188 32 1 2.9867 -4.5757 4.0066 33 1 4.0193 -5.3342 8.6226 34 1 2.4978 -4.8504 10.4972 35 1 0.3544 -3.7120 10.0809 36 1 -0.2638 -3.0501 7.7911 37 1 1.2620 -3.5257 5.9179 38 1 5.6074 -3.6770 5.9553 39 1 5.3669 -4.7102 7.4297 40 1 5.8417 -6.3547 3.6149 41 1 3.8490 -6.8295 6.7306 42 1 3.4516 -6.6833 4.9644 43 1 2.2756 -3.8287 2.4820 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_12360598.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:48:55 Heat of formation + Delta-G solvation = -101.026166 kcal Electronic energy + Delta-G solvation = -33175.547495 eV Core-core repulsion = 28404.017155 eV Total energy + Delta-G solvation = -4771.530340 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.116 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -50.14616 -50.11674 -42.25545 -40.71474 -39.56574 -39.19492 -37.64156 -36.26650 -34.53531 -32.97750 -31.72348 -31.65587 -31.39939 -27.99259 -26.97581 -25.82097 -24.41455 -23.96661 -23.45600 -22.51417 -21.87267 -20.34471 -19.75688 -18.85876 -18.67627 -18.53407 -17.95638 -17.75326 -17.36282 -16.94043 -16.88485 -16.59245 -16.41913 -16.13996 -15.90973 -15.86295 -15.61454 -15.51928 -15.34580 -15.20399 -14.90965 -14.55536 -14.34702 -14.21707 -14.02299 -13.83413 -13.61842 -13.27283 -13.16873 -13.00658 -12.96136 -12.37122 -12.34970 -12.24513 -12.18856 -11.94683 -11.52493 -11.06185 -10.98408 -10.62798 -10.59144 -10.15281 -9.85484 -9.84599 -9.59251 -5.06991 -0.82707 -0.33904 0.38798 0.46876 1.14237 1.40096 1.60628 1.79123 1.91625 2.23804 2.75521 2.77202 2.81735 3.08758 3.12298 3.26299 3.42220 3.48447 3.52364 3.60320 3.68096 3.76799 3.82660 4.03150 4.09234 4.14108 4.23625 4.28810 4.31375 4.35350 4.52705 4.59564 4.61438 4.65800 4.67287 4.69691 4.81237 4.83294 4.96365 4.98220 5.04245 5.12544 5.33857 5.36214 5.53563 5.60038 5.69683 6.07216 6.31908 6.66240 6.90048 7.02900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.077 4.077 3 Si 0.778 3.222 4 C -0.097 4.097 5 C -0.120 4.120 6 C 0.140 3.860 7 F -0.122 7.122 8 C -0.149 4.149 9 C 0.560 3.440 10 O -0.546 6.546 11 N -0.681 5.681 12 C 0.190 3.810 13 C -0.083 4.083 14 C -0.120 4.120 15 C -0.124 4.124 16 C -0.133 4.133 17 C -0.132 4.132 18 C -0.122 4.122 19 C -0.139 4.139 20 C 0.087 3.913 21 H 0.094 0.906 22 O -0.566 6.566 23 C -0.146 4.146 24 C -0.079 4.079 25 C 0.101 3.899 26 F -0.129 7.129 27 H 0.399 0.601 28 H 0.114 0.886 29 H -0.281 1.281 30 H -0.288 1.288 31 H 0.182 0.818 32 H 0.414 0.586 33 H 0.143 0.857 34 H 0.142 0.858 35 H 0.136 0.864 36 H 0.129 0.871 37 H 0.111 0.889 38 H 0.053 0.947 39 H 0.115 0.885 40 H 0.398 0.602 41 H 0.121 0.879 42 H 0.097 0.903 43 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.283 -4.369 0.623 4.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.186 4.186 3 Si 0.682 3.318 4 C -0.099 4.099 5 C -0.138 4.138 6 C 0.119 3.881 7 F -0.100 7.100 8 C -0.153 4.153 9 C 0.347 3.653 10 O -0.423 6.423 11 N -0.333 5.333 12 C 0.103 3.897 13 C -0.084 4.084 14 C -0.138 4.138 15 C -0.142 4.142 16 C -0.151 4.151 17 C -0.150 4.150 18 C -0.140 4.140 19 C -0.178 4.178 20 C 0.027 3.973 21 H 0.112 0.888 22 O -0.374 6.374 23 C -0.184 4.184 24 C -0.099 4.099 25 C 0.081 3.919 26 F -0.108 7.108 27 H 0.250 0.750 28 H 0.132 0.868 29 H -0.207 1.207 30 H -0.215 1.215 31 H 0.199 0.801 32 H 0.253 0.747 33 H 0.160 0.840 34 H 0.160 0.840 35 H 0.154 0.846 36 H 0.147 0.853 37 H 0.129 0.871 38 H 0.072 0.928 39 H 0.133 0.867 40 H 0.249 0.751 41 H 0.139 0.861 42 H 0.116 0.884 43 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges -0.494 -3.061 0.511 3.143 hybrid contribution -0.019 -1.102 -0.771 1.345 sum -0.513 -4.163 -0.260 4.203 Atomic orbital electron populations 1.86554 1.16149 1.82140 1.50550 1.25275 0.86057 1.11475 0.95837 0.93798 0.78301 0.74032 0.85707 1.20572 0.99053 0.92566 0.97666 1.20996 1.00026 1.02044 0.90719 1.17802 0.96255 0.88314 0.85707 1.91609 1.84078 1.77448 1.56896 1.19894 1.06162 0.92607 0.96639 1.17985 0.78446 0.82823 0.86023 1.90870 1.45290 1.66681 1.39508 1.45249 1.67133 1.05200 1.15697 1.20022 0.92542 0.94601 0.82507 1.19935 0.94852 0.98890 0.94738 1.21165 1.00460 1.00706 0.91489 1.21452 0.94262 0.98571 0.99936 1.21454 0.97635 0.98802 0.97186 1.21372 1.00150 1.00184 0.93290 1.21010 0.94684 0.99233 0.99113 1.23579 0.94339 0.98676 1.01157 1.22734 0.95589 0.96152 0.82799 0.88779 1.86478 1.93266 1.38217 1.19432 1.24049 0.97208 0.92057 1.05098 1.21300 0.96236 1.02136 0.90179 1.17371 0.99348 0.89215 0.85944 1.91560 1.84436 1.78265 1.56491 0.75040 0.86815 1.20724 1.21514 0.80134 0.74731 0.83964 0.83981 0.84588 0.85276 0.87127 0.92788 0.86680 0.75130 0.86110 0.88427 0.80807 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.83 12.88 -148.98 -1.92 -1.09 16 2 C -0.08 0.17 2.44 71.24 0.17 0.34 16 3 Si 0.78 -3.17 29.90 68.60 2.05 -1.12 16 4 C -0.10 0.14 5.27 -19.78 -0.10 0.04 16 5 C -0.12 0.23 8.62 22.27 0.19 0.42 16 6 C 0.14 0.55 7.28 22.67 0.17 0.72 16 7 F -0.12 -1.18 15.55 44.97 0.70 -0.48 16 8 C -0.15 -0.47 5.88 -20.06 -0.12 -0.58 16 9 C 0.56 3.83 6.00 86.74 0.52 4.35 16 10 O -0.55 -8.28 13.72 -3.93 -0.05 -8.33 16 11 N -0.68 -0.48 3.81 -426.90 -1.63 -2.11 16 12 C 0.19 0.13 0.94 3.38 0.00 0.13 16 13 C -0.08 -0.32 4.83 -19.87 -0.10 -0.42 16 14 C -0.12 -0.22 8.60 22.27 0.19 -0.03 16 15 C -0.12 -0.24 10.05 22.27 0.22 -0.02 16 16 C -0.13 -0.42 10.05 22.27 0.22 -0.20 16 17 C -0.13 -0.63 10.05 22.27 0.22 -0.41 16 18 C -0.12 -0.70 8.80 22.27 0.20 -0.51 16 19 C -0.14 -0.30 6.58 31.12 0.20 -0.09 16 20 C 0.09 -0.35 5.29 31.18 0.16 -0.19 16 21 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 22 O -0.57 1.50 13.10 -148.98 -1.95 -0.45 16 23 C -0.15 0.88 7.11 31.18 0.22 1.11 16 24 C -0.08 0.14 9.51 22.57 0.21 0.35 16 25 C 0.10 0.01 7.23 22.33 0.16 0.17 16 26 F -0.13 -0.36 16.73 44.97 0.75 0.39 16 27 H 0.40 -4.13 8.70 -74.06 -0.64 -4.77 16 28 H 0.11 -0.06 7.89 -2.39 -0.02 -0.08 16 29 H -0.28 -0.31 7.11 99.48 0.71 0.39 16 30 H -0.29 -0.88 7.11 99.48 0.71 -0.18 16 31 H 0.18 -1.37 5.10 -2.91 -0.01 -1.39 16 32 H 0.41 -2.02 6.72 -92.71 -0.62 -2.64 16 33 H 0.14 -0.44 6.67 -2.91 -0.02 -0.46 16 34 H 0.14 -0.37 8.06 -2.91 -0.02 -0.39 16 35 H 0.14 -0.09 8.06 -2.91 -0.02 -0.12 16 36 H 0.13 0.23 8.06 -2.91 -0.02 0.20 16 37 H 0.11 0.56 6.53 -2.91 -0.02 0.54 16 38 H 0.05 0.54 7.15 -2.39 -0.02 0.52 16 39 H 0.12 -0.06 6.32 -2.38 -0.02 -0.08 16 40 H 0.40 -4.51 9.12 -74.06 -0.68 -5.18 16 41 H 0.12 -1.00 7.72 -2.39 -0.02 -1.01 16 42 H 0.10 -0.85 8.09 -2.39 -0.02 -0.87 16 43 H 0.17 -1.31 6.42 -2.91 -0.02 -1.33 16 Total: 0.00 -25.51 363.17 -0.06 -25.58 By element: Atomic # 1 Polarization: -16.80 SS G_CDS: -0.78 Total: -17.58 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: 2.76 Total: 5.19 kcal Atomic # 7 Polarization: -0.48 SS G_CDS: -1.63 Total: -2.11 kcal Atomic # 8 Polarization: -5.95 SS G_CDS: -3.92 Total: -9.87 kcal Atomic # 9 Polarization: -1.54 SS G_CDS: 1.45 Total: -0.09 kcal Atomic # 14 Polarization: -3.17 SS G_CDS: 2.05 Total: -1.12 kcal Total: -25.51 -0.06 -25.58 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_12360598.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.451 kcal (2) G-P(sol) polarization free energy of solvation -25.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.063 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds