Wall clock time and date at job start Sat Mar 6 2021 23:48:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35660 * 116.99782 * 2 1 4 4 C 1.40139 * 120.14976 * 180.02562 * 3 2 1 5 5 C 1.47537 * 120.18864 * 359.97438 * 4 3 2 6 6 O 1.21586 * 119.99962 * 359.72485 * 5 4 3 7 7 N 1.34781 * 119.99859 * 179.72237 * 5 4 3 8 8 C 1.46494 * 120.00015 * 185.41018 * 7 5 4 9 9 C 1.50701 * 112.84978 * 284.34708 * 8 7 5 10 10 C 1.38240 * 119.99771 * 166.60754 * 9 8 7 11 11 C 1.38234 * 119.99647 * 179.74373 * 10 9 8 12 12 C 1.38236 * 120.00328 * 0.55037 * 11 10 9 13 13 C 1.38237 * 119.99769 * 359.69894 * 12 11 10 14 14 C 1.38230 * 120.00203 * 346.87746 * 9 8 7 15 15 C 1.53779 * 113.61650 * 153.03955 * 8 7 5 16 16 C 1.54049 * 87.07789 * 270.88411 * 15 8 7 17 17 H 1.09005 * 113.69700 * 220.05664 * 16 15 8 18 18 O 1.42896 * 113.61779 * 89.07093 * 16 15 8 19 19 C 1.53780 * 113.61505 * 55.54152 * 8 7 5 20 20 C 1.39700 * 119.61788 * 179.72219 * 4 3 2 21 21 C 1.37792 * 119.90806 * 0.25621 * 20 4 3 22 22 C 1.50699 * 119.84979 * 180.02562 * 21 20 4 23 23 O 1.42908 * 109.46977 * 299.99411 * 22 21 20 24 24 Si 1.86296 * 109.47072 * 179.97438 * 22 21 20 25 25 C 1.38545 * 120.30148 * 359.97438 * 21 20 4 26 26 C 1.38060 * 120.38753 * 0.02562 * 25 21 20 27 27 H 1.08999 * 109.47258 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.47211 * 299.99807 * 1 2 3 29 29 H 1.09003 * 109.47376 * 59.99794 * 1 2 3 30 30 H 0.96996 * 119.99799 * 5.41655 * 7 5 4 31 31 H 1.07996 * 119.99955 * 359.97438 * 10 9 8 32 32 H 1.08002 * 120.00205 * 180.27180 * 11 10 9 33 33 H 1.07998 * 120.00295 * 179.72775 * 12 11 10 34 34 H 1.07996 * 120.00125 * 179.97438 * 13 12 11 35 35 H 1.07998 * 119.99988 * 0.02562 * 14 9 8 36 36 H 1.09004 * 113.60839 * 25.43074 * 15 8 7 37 37 H 1.08992 * 113.61839 * 156.33712 * 15 8 7 38 38 H 0.96694 * 114.00413 * 82.61611 * 18 16 15 39 39 H 1.09001 * 113.62107 * 203.66242 * 19 8 7 40 40 H 1.09001 * 113.61317 * 334.48682 * 19 8 7 41 41 H 1.08006 * 120.04780 * 180.22753 * 20 4 3 42 42 H 1.08998 * 109.47667 * 59.99368 * 22 21 20 43 43 H 0.96701 * 113.99550 * 300.00115 * 23 22 21 44 44 H 1.48502 * 110.00371 * 58.67745 * 24 22 21 45 45 H 1.48502 * 110.00252 * 179.97438 * 24 22 21 46 46 H 1.07997 * 119.80594 * 180.02562 * 25 21 20 47 47 H 1.07998 * 119.95350 * 180.02562 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 3.4441 1.2858 -0.0005 5 6 4.2550 0.0533 -0.0005 6 8 3.7094 -1.0333 0.0050 7 7 5.6005 0.1318 -0.0067 8 6 6.4048 -1.0867 -0.1264 9 6 6.4518 -1.8846 1.1512 10 6 6.9268 -3.1828 1.1382 11 6 6.9749 -3.9129 2.3110 12 6 6.5374 -3.3488 3.4948 13 6 6.0576 -2.0524 3.5069 14 6 6.0148 -1.3204 2.3350 15 6 7.7863 -0.8532 -0.7602 16 6 7.1144 -1.0988 -2.1245 17 1 7.7223 -1.6861 -2.8129 18 8 6.5837 0.0854 -2.7227 19 6 6.0653 -1.9296 -1.3669 20 6 4.0667 2.5364 -0.0064 21 6 3.3036 3.6837 -0.0063 22 6 3.9766 5.0321 -0.0132 23 8 4.7972 5.1609 1.1496 24 14 2.6824 6.3721 -0.0121 25 6 1.9205 3.6034 -0.0009 26 6 1.2924 2.3740 0.0049 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 6.0362 0.9952 0.0681 31 1 7.2637 -3.6253 0.2125 32 1 7.3500 -4.9256 2.3017 33 1 6.5709 -3.9208 4.4103 34 1 5.7155 -1.6119 4.4316 35 1 5.6393 -0.3078 2.3443 36 1 8.1585 0.1634 -0.6335 37 1 8.5228 -1.6111 -0.4935 38 1 7.2387 0.6122 -3.2007 39 1 6.3313 -2.9819 -1.2662 40 1 5.0477 -1.7831 -1.7292 41 1 5.1446 2.6039 -0.0106 42 1 4.5947 5.1252 -0.9062 43 1 4.3124 5.0882 1.9831 44 1 1.8126 6.2372 1.1840 45 1 3.3332 7.7069 -0.0182 46 1 1.3303 4.5078 -0.0013 47 1 0.2138 2.3196 0.0087 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_12496546.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:48:58 Heat of formation + Delta-G solvation = -48.243624 kcal Electronic energy + Delta-G solvation = -32833.339660 eV Core-core repulsion = 28528.786282 eV Total energy + Delta-G solvation = -4304.553377 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.23876 -41.34542 -39.55617 -39.23348 -39.05853 -37.23049 -36.18883 -34.26935 -32.47839 -31.87255 -31.66435 -31.57688 -28.55341 -26.99046 -26.20101 -26.16620 -24.85556 -23.54773 -22.81886 -22.28699 -21.45395 -20.25362 -19.52712 -18.66727 -18.46020 -18.08345 -17.83340 -17.25586 -16.84992 -16.68902 -16.43156 -16.16210 -16.06920 -15.85800 -15.76206 -15.51681 -15.20080 -15.04686 -14.65555 -14.53621 -14.45846 -14.30817 -14.02671 -13.60925 -13.54919 -13.42126 -13.22248 -13.06953 -12.95312 -12.42808 -12.30871 -12.25121 -12.21313 -12.05753 -11.92899 -11.68524 -11.46016 -10.93481 -10.89354 -10.53514 -10.22682 -9.98759 -9.86039 -9.59369 -9.29283 -4.90126 -0.24816 0.21173 0.38606 0.45799 1.32872 1.61581 1.82262 1.98294 2.05199 2.26391 2.69836 2.76891 3.14198 3.39510 3.45057 3.56041 3.63255 3.64150 3.69199 3.74221 3.82584 3.96642 4.05750 4.08932 4.16679 4.21806 4.28607 4.33500 4.36253 4.42067 4.58490 4.61309 4.63180 4.66164 4.67894 4.72633 4.81877 4.87299 4.92365 4.98006 5.00789 5.04818 5.10396 5.12814 5.26773 5.42475 5.53477 5.56589 5.58258 5.76110 6.06677 6.30073 6.50169 6.54875 6.92578 7.29025 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.313 6.313 3 C 0.170 3.830 4 C -0.195 4.195 5 C 0.563 3.437 6 O -0.551 6.551 7 N -0.689 5.689 8 C 0.191 3.809 9 C -0.082 4.082 10 C -0.122 4.122 11 C -0.124 4.124 12 C -0.134 4.134 13 C -0.134 4.134 14 C -0.122 4.122 15 C -0.148 4.148 16 C 0.088 3.912 17 H 0.095 0.905 18 O -0.563 6.563 19 C -0.138 4.138 20 C -0.016 4.016 21 C -0.164 4.164 22 C -0.073 4.073 23 O -0.547 6.547 24 Si 0.762 3.238 25 C -0.044 4.044 26 C -0.213 4.213 27 H 0.106 0.894 28 H 0.071 0.929 29 H 0.075 0.925 30 H 0.408 0.592 31 H 0.142 0.858 32 H 0.143 0.857 33 H 0.137 0.863 34 H 0.128 0.872 35 H 0.108 0.892 36 H 0.093 0.907 37 H 0.119 0.881 38 H 0.397 0.603 39 H 0.114 0.886 40 H 0.053 0.947 41 H 0.146 0.854 42 H 0.130 0.870 43 H 0.386 0.614 44 H -0.281 1.281 45 H -0.304 1.304 46 H 0.158 0.842 47 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.891 2.990 -2.461 3.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.225 6.225 3 C 0.121 3.879 4 C -0.199 4.199 5 C 0.351 3.649 6 O -0.430 6.430 7 N -0.341 5.341 8 C 0.103 3.897 9 C -0.083 4.083 10 C -0.140 4.140 11 C -0.142 4.142 12 C -0.151 4.151 13 C -0.152 4.152 14 C -0.140 4.140 15 C -0.186 4.186 16 C 0.029 3.971 17 H 0.112 0.888 18 O -0.371 6.371 19 C -0.176 4.176 20 C -0.034 4.034 21 C -0.165 4.165 22 C -0.182 4.182 23 O -0.355 6.355 24 Si 0.667 3.333 25 C -0.061 4.061 26 C -0.232 4.232 27 H 0.124 0.876 28 H 0.090 0.910 29 H 0.093 0.907 30 H 0.246 0.754 31 H 0.160 0.840 32 H 0.161 0.839 33 H 0.155 0.845 34 H 0.146 0.854 35 H 0.126 0.874 36 H 0.112 0.888 37 H 0.137 0.863 38 H 0.247 0.753 39 H 0.132 0.868 40 H 0.072 0.928 41 H 0.163 0.837 42 H 0.147 0.853 43 H 0.235 0.765 44 H -0.207 1.207 45 H -0.232 1.232 46 H 0.175 0.825 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 0.161 2.538 -2.252 3.397 hybrid contribution 0.538 0.258 1.175 1.318 sum 0.699 2.796 -1.077 3.077 Atomic orbital electron populations 1.23431 0.76644 1.05361 1.02808 1.86343 1.23103 1.26421 1.86603 1.19412 0.91315 0.85556 0.91580 1.19473 0.91216 0.94164 1.15056 1.18158 0.82314 0.88601 0.75777 1.90805 1.72310 1.30034 1.49808 1.45248 1.04829 1.09330 1.74654 1.19981 0.93406 0.85324 0.90949 1.20041 0.98754 0.95096 0.94423 1.21190 1.00240 0.93275 0.99287 1.21448 0.99513 1.00785 0.92452 1.21441 0.99081 0.95388 0.99238 1.21363 1.00062 0.95387 0.98350 1.20998 0.99968 1.00030 0.92993 1.24047 0.93923 1.04945 0.95636 1.22727 0.94271 0.87118 0.93000 0.88756 1.86500 1.40640 1.37205 1.72800 1.23534 1.00061 0.99541 0.94474 1.21062 1.00512 0.89289 0.92580 1.20182 0.93809 0.95846 1.06664 1.25129 1.02865 0.98830 0.91397 1.86574 1.37769 1.94471 1.16645 0.94172 0.77642 0.73917 0.87547 1.21263 0.93788 0.97839 0.93240 1.21466 1.01723 0.90924 1.09055 0.87592 0.91025 0.90697 0.75387 0.84048 0.83884 0.84517 0.85444 0.87368 0.88805 0.86286 0.75282 0.86767 0.92822 0.83677 0.85263 0.76504 1.20702 1.23186 0.82499 0.82056 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.01 9.81 113.37 1.11 1.12 16 2 O -0.31 -3.36 8.57 -68.83 -0.59 -3.95 16 3 C 0.17 1.27 6.70 22.84 0.15 1.42 16 4 C -0.20 -1.51 5.89 -20.01 -0.12 -1.62 16 5 C 0.56 6.45 6.65 86.70 0.58 7.03 16 6 O -0.55 -10.77 13.55 16.93 0.23 -10.54 16 7 N -0.69 -3.44 3.50 -427.06 -1.50 -4.93 16 8 C 0.19 0.79 0.95 3.38 0.00 0.79 16 9 C -0.08 -0.57 4.99 -19.87 -0.10 -0.67 16 10 C -0.12 -0.54 8.73 22.27 0.19 -0.35 16 11 C -0.12 -0.50 10.05 22.27 0.22 -0.28 16 12 C -0.13 -0.70 10.05 22.27 0.22 -0.48 16 13 C -0.13 -0.99 10.05 22.27 0.22 -0.77 16 14 C -0.12 -1.09 9.15 22.27 0.20 -0.89 16 15 C -0.15 0.41 7.15 31.21 0.22 0.64 16 16 C 0.09 -0.10 5.29 31.21 0.17 0.06 16 17 H 0.09 -0.50 8.14 -2.38 -0.02 -0.52 16 18 O -0.56 -0.15 13.09 -148.98 -1.95 -2.10 16 19 C -0.14 -0.73 6.51 31.12 0.20 -0.53 16 20 C -0.02 -0.03 9.08 22.52 0.20 0.18 16 21 C -0.16 0.21 5.39 -19.90 -0.11 0.10 16 22 C -0.07 0.23 2.81 71.24 0.20 0.43 16 23 O -0.55 0.15 12.76 -148.98 -1.90 -1.75 16 24 Si 0.76 -3.21 29.77 68.60 2.04 -1.16 16 25 C -0.04 0.11 8.66 22.30 0.19 0.30 16 26 C -0.21 -0.08 9.03 22.34 0.20 0.12 16 27 H 0.11 -0.06 8.14 -2.39 -0.02 -0.08 16 28 H 0.07 -0.21 7.65 -2.39 -0.02 -0.23 16 29 H 0.07 -0.24 7.67 -2.39 -0.02 -0.26 16 30 H 0.41 0.13 6.80 -92.71 -0.63 -0.50 16 31 H 0.14 -0.06 6.53 -2.91 -0.02 -0.08 16 32 H 0.14 -0.12 8.06 -2.91 -0.02 -0.14 16 33 H 0.14 0.15 8.06 -2.91 -0.02 0.12 16 34 H 0.13 0.56 8.06 -2.91 -0.02 0.53 16 35 H 0.11 0.98 6.96 -2.91 -0.02 0.96 16 36 H 0.09 -0.47 8.13 -2.39 -0.02 -0.49 16 37 H 0.12 -0.63 7.80 -2.39 -0.02 -0.65 16 38 H 0.40 -3.46 9.12 -74.06 -0.68 -4.14 16 39 H 0.11 0.26 6.21 -2.39 -0.01 0.24 16 40 H 0.05 0.73 6.71 -2.39 -0.02 0.72 16 41 H 0.15 -0.24 6.42 -2.91 -0.02 -0.26 16 42 H 0.13 -0.67 7.96 -2.39 -0.02 -0.68 16 43 H 0.39 -2.00 8.70 -74.06 -0.64 -2.65 16 44 H -0.28 0.18 7.11 99.48 0.71 0.88 16 45 H -0.30 -1.21 7.11 99.48 0.71 -0.50 16 46 H 0.16 -1.23 4.85 -2.91 -0.01 -1.24 16 47 H 0.16 -0.78 6.30 -2.91 -0.02 -0.80 16 Total: 0.00 -27.03 380.63 -0.54 -27.57 By element: Atomic # 1 Polarization: -8.90 SS G_CDS: -0.86 Total: -9.76 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: 3.98 Total: 6.61 kcal Atomic # 7 Polarization: -3.44 SS G_CDS: -1.50 Total: -4.93 kcal Atomic # 8 Polarization: -14.11 SS G_CDS: -4.21 Total: -18.33 kcal Atomic # 14 Polarization: -3.21 SS G_CDS: 2.04 Total: -1.16 kcal Total: -27.03 -0.54 -27.57 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_12496546.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.674 kcal (2) G-P(sol) polarization free energy of solvation -27.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.544 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.569 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds