Wall clock time and date at job start Sat Mar 6 2021 23:49:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.46945 * 2 1 4 4 C 1.50691 * 109.47541 * 120.00297 * 2 1 3 5 5 C 1.34844 * 125.65157 * 64.95018 * 4 2 1 6 6 C 1.40798 * 107.04726 * 180.02562 * 5 4 2 7 7 C 1.36098 * 106.73624 * 359.97438 * 6 5 4 8 8 C 1.47568 * 125.94581 * 180.02562 * 7 6 5 9 9 C 1.39563 * 119.95823 * 180.02562 * 8 7 6 10 10 C 1.38319 * 119.81759 * 180.02562 * 9 8 7 11 11 O 1.35671 * 120.13901 * 179.97438 * 10 9 8 12 12 C 1.40372 * 119.72060 * 359.97438 * 10 9 8 13 13 C 1.47291 * 120.04234 * 180.02562 * 12 10 9 14 14 O 1.21622 * 120.00347 * 359.97438 * 13 12 10 15 15 N 1.34778 * 119.99795 * 180.02562 * 13 12 10 16 16 C 1.46501 * 119.99932 * 174.89907 * 15 13 12 17 17 C 1.50697 * 112.85385 * 295.31424 * 16 15 13 18 18 C 1.38231 * 119.99909 * 163.98420 * 17 16 15 19 19 C 1.38235 * 119.99601 * 179.78944 * 18 17 16 20 20 C 1.38235 * 120.00012 * 0.43689 * 19 18 17 21 21 C 1.38225 * 120.00233 * 359.81025 * 20 19 18 22 22 C 1.38235 * 120.00018 * 359.97438 * 21 20 19 23 23 C 1.53785 * 113.61283 * 164.11295 * 16 15 13 24 24 C 1.53780 * 87.08458 * 270.88814 * 23 16 15 25 25 H 1.09001 * 113.61421 * 220.02081 * 24 23 16 26 26 O 1.42897 * 113.61319 * 89.19847 * 24 23 16 27 27 C 1.53785 * 113.61027 * 66.51375 * 16 15 13 28 28 C 1.39909 * 119.90865 * 0.02562 * 12 10 9 29 29 C 1.36394 * 120.18734 * 359.71704 * 28 12 10 30 30 O 1.34231 * 125.65678 * 244.97634 * 4 2 1 31 31 H 0.96699 * 113.99459 * 299.99445 * 1 2 3 32 32 H 1.09005 * 109.47043 * 240.00516 * 2 1 3 33 33 H 1.48503 * 109.99912 * 178.68303 * 3 2 1 34 34 H 1.48491 * 110.00388 * 300.00270 * 3 2 1 35 35 H 1.08000 * 126.47129 * 0.02562 * 5 4 2 36 36 H 1.08001 * 126.62795 * 180.26565 * 6 5 4 37 37 H 1.08002 * 120.09503 * 359.97438 * 9 8 7 38 38 H 0.96702 * 114.00158 * 89.99988 * 11 10 9 39 39 H 0.97001 * 119.99952 * 354.90364 * 15 13 12 40 40 H 1.07997 * 120.00244 * 359.97438 * 18 17 16 41 41 H 1.08006 * 120.00171 * 180.27391 * 19 18 17 42 42 H 1.08013 * 119.99756 * 179.83718 * 20 19 18 43 43 H 1.07997 * 120.00619 * 180.02562 * 21 20 19 44 44 H 1.08000 * 120.00069 * 179.97438 * 22 21 20 45 45 H 1.09000 * 113.61160 * 25.44174 * 23 16 15 46 46 H 1.09000 * 113.61440 * 156.33544 * 23 16 15 47 47 H 0.96703 * 113.99995 * 180.02562 * 26 24 23 48 48 H 1.09005 * 113.60757 * 203.66074 * 27 16 15 49 49 H 1.09000 * 113.61718 * 334.55847 * 27 16 15 50 50 H 1.08006 * 119.90554 * 180.02562 * 28 12 10 51 51 H 1.08001 * 119.86108 * 180.27539 * 29 28 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 1.7561 -2.0179 1.5096 6 6 2.3798 -2.2628 2.7479 7 6 2.9082 -1.0787 3.1615 8 6 3.6581 -0.8546 4.4125 9 6 4.1461 0.4176 4.7142 10 6 4.8491 0.6242 5.8874 11 8 5.3269 1.8582 6.1869 12 6 5.0661 -0.4482 6.7668 13 6 5.8133 -0.2360 8.0182 14 8 6.2431 0.8687 8.2901 15 7 6.0215 -1.2665 8.8617 16 6 6.8585 -1.0828 10.0499 17 6 8.2954 -0.7788 9.7124 18 6 9.1367 -0.2576 10.6774 19 6 10.4559 0.0171 10.3689 20 6 10.9313 -0.2209 9.0929 21 6 10.0887 -0.7373 8.1265 22 6 8.7707 -1.0162 8.4362 23 6 6.6941 -2.1966 11.0974 24 6 5.5588 -1.3532 11.7012 25 1 5.5489 -1.3507 12.7912 26 8 4.2763 -1.6307 11.1353 27 6 6.2530 -0.1226 11.0874 28 6 4.5717 -1.7188 6.4528 29 6 3.8744 -1.9172 5.2975 30 8 2.6273 -0.1465 2.2302 31 1 -0.3932 0.4416 0.7651 32 1 1.7924 -0.5138 -0.8901 33 1 3.5346 1.7703 0.0321 34 1 1.5615 2.4679 -1.2084 35 1 1.2356 -2.7406 0.8987 36 1 2.4330 -3.2085 3.2667 37 1 3.9761 1.2384 4.0332 38 1 4.7111 2.4064 6.6922 39 1 5.6172 -2.1297 8.6819 40 1 8.7642 -0.0678 11.6732 41 1 11.1145 0.4202 11.1241 42 1 11.9614 -0.0038 8.8512 43 1 10.4602 -0.9237 7.1297 44 1 8.1122 -1.4193 7.6810 45 1 6.3580 -3.1447 10.6775 46 1 7.5549 -2.3063 11.7570 47 1 3.5582 -1.1030 11.5107 48 1 6.9935 0.3338 11.7443 49 1 5.5610 0.6028 10.6595 50 1 4.7383 -2.5438 7.1296 51 1 3.4913 -2.8992 5.0625 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_12807986.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:49:18 Heat of formation + Delta-G solvation = -34.360354 kcal Electronic energy + Delta-G solvation = -38489.829186 eV Core-core repulsion = 33482.517219 eV Total energy + Delta-G solvation = -5007.311967 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.150 amu Computer time = 1.80 seconds Orbital eigenvalues (eV) -43.74150 -42.18206 -40.96799 -39.31162 -38.93141 -38.10236 -37.79025 -36.20201 -34.46070 -34.09766 -33.04141 -31.67073 -31.57969 -31.26602 -30.40899 -27.21339 -27.00051 -25.78594 -24.38798 -24.06206 -23.40604 -22.65963 -22.32894 -21.86145 -21.33877 -20.24857 -19.68256 -18.85144 -18.59960 -18.46221 -17.89328 -17.70049 -17.40218 -17.14855 -16.58580 -16.46710 -16.32794 -15.99829 -15.79966 -15.73739 -15.53796 -15.41914 -15.17796 -14.90232 -14.75896 -14.37066 -14.23981 -14.17273 -14.02166 -13.90025 -13.82572 -13.64606 -13.57206 -13.54510 -13.28352 -12.90592 -12.87016 -12.72493 -12.42883 -12.12117 -12.02713 -11.88152 -11.78344 -11.55688 -11.12688 -10.95869 -10.73682 -10.61519 -10.57822 -10.00189 -9.93638 -9.71359 -9.47776 -9.01036 -5.07948 -0.76114 0.12923 0.50900 0.60589 0.66897 1.10187 1.40159 1.46497 1.74707 1.90163 2.01879 2.05672 2.67411 2.87805 2.94275 3.03032 3.20972 3.35791 3.43601 3.55560 3.57452 3.62651 3.76374 3.80073 3.84987 3.91633 3.94310 4.10241 4.17564 4.18280 4.25650 4.27589 4.32513 4.38924 4.57517 4.58605 4.62082 4.67187 4.67524 4.71145 4.76999 4.82582 4.84206 4.94637 5.01026 5.03879 5.09611 5.14601 5.19304 5.20677 5.37759 5.46449 5.49008 5.65182 5.72569 5.83557 5.95687 6.17576 6.34849 6.53009 6.58109 6.70678 7.33130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.046 4.046 5 C -0.174 4.174 6 C -0.178 4.178 7 C 0.024 3.976 8 C 0.029 3.971 9 C -0.141 4.141 10 C 0.178 3.822 11 O -0.473 6.473 12 C -0.163 4.163 13 C 0.561 3.439 14 O -0.506 6.506 15 N -0.699 5.699 16 C 0.201 3.799 17 C -0.073 4.073 18 C -0.112 4.112 19 C -0.118 4.118 20 C -0.121 4.121 21 C -0.117 4.117 22 C -0.101 4.101 23 C -0.125 4.125 24 C 0.079 3.921 25 H 0.074 0.926 26 O -0.548 6.548 27 C -0.167 4.167 28 C -0.064 4.064 29 C -0.116 4.116 30 O -0.161 6.161 31 H 0.384 0.616 32 H 0.134 0.866 33 H -0.252 1.252 34 H -0.246 1.246 35 H 0.155 0.845 36 H 0.156 0.844 37 H 0.143 0.857 38 H 0.398 0.602 39 H 0.403 0.597 40 H 0.122 0.878 41 H 0.123 0.877 42 H 0.121 0.879 43 H 0.120 0.880 44 H 0.114 0.886 45 H 0.085 0.915 46 H 0.112 0.888 47 H 0.383 0.617 48 H 0.100 0.900 49 H 0.085 0.915 50 H 0.136 0.864 51 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.992 -2.394 3.976 5.522 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.138 4.138 3 Si 0.599 3.401 4 C -0.096 4.096 5 C -0.193 4.193 6 C -0.197 4.197 7 C -0.025 4.025 8 C 0.028 3.972 9 C -0.160 4.160 10 C 0.131 3.869 11 O -0.284 6.284 12 C -0.167 4.167 13 C 0.349 3.651 14 O -0.381 6.381 15 N -0.352 5.352 16 C 0.114 3.886 17 C -0.074 4.074 18 C -0.131 4.131 19 C -0.136 4.136 20 C -0.139 4.139 21 C -0.135 4.135 22 C -0.119 4.119 23 C -0.163 4.163 24 C 0.020 3.980 25 H 0.092 0.908 26 O -0.354 6.354 27 C -0.205 4.205 28 C -0.082 4.082 29 C -0.134 4.134 30 O -0.059 6.059 31 H 0.232 0.768 32 H 0.151 0.849 33 H -0.176 1.176 34 H -0.170 1.170 35 H 0.173 0.827 36 H 0.174 0.826 37 H 0.161 0.839 38 H 0.256 0.744 39 H 0.239 0.761 40 H 0.140 0.860 41 H 0.141 0.859 42 H 0.139 0.861 43 H 0.138 0.862 44 H 0.132 0.868 45 H 0.104 0.896 46 H 0.130 0.870 47 H 0.231 0.769 48 H 0.118 0.882 49 H 0.104 0.896 50 H 0.154 0.846 51 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -1.173 -1.595 2.548 3.227 hybrid contribution -0.819 -0.750 0.210 1.130 sum -1.992 -2.345 2.758 4.132 Atomic orbital electron populations 1.86566 1.16100 1.81743 1.49146 1.24415 0.85233 1.11275 0.92904 0.94262 0.81728 0.76862 0.87212 1.22989 1.00541 0.93911 0.92181 1.21584 1.04006 0.95688 0.98007 1.21906 1.02003 0.98403 0.97387 1.20330 1.03675 0.87518 0.91027 1.17742 0.95760 0.93708 0.89949 1.21583 0.98798 0.97510 0.98093 1.18275 0.91403 0.85767 0.91443 1.84785 1.44571 1.22725 1.76358 1.20515 1.04627 0.95022 0.96498 1.17883 0.79818 0.84602 0.82843 1.90855 1.49159 1.23234 1.74880 1.45421 1.51550 1.14149 1.24072 1.19789 0.86735 0.97477 0.84594 1.19708 0.94078 0.99362 0.94269 1.20890 0.93651 0.99485 0.99045 1.21118 0.95548 1.00062 0.96828 1.21177 0.99846 0.99325 0.93529 1.21144 0.93828 0.99165 0.99389 1.20887 0.95487 0.99674 0.95897 1.23432 0.98049 0.97692 0.97088 1.22760 0.83837 0.95278 0.96173 0.90830 1.86409 1.16490 1.66102 1.66392 1.24144 1.01046 0.97627 0.97687 1.20836 0.95268 0.95635 0.96501 1.20702 1.00216 0.98659 0.93825 1.83935 1.57607 1.37882 1.26439 0.76815 0.84904 1.17644 1.16974 0.82718 0.82631 0.83877 0.74373 0.76084 0.85970 0.85911 0.86080 0.86202 0.86796 0.89611 0.86986 0.76897 0.88162 0.89610 0.84622 0.84412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.27 12.88 -35.23 -0.45 -0.18 16 2 C -0.03 0.01 2.98 36.00 0.11 0.12 16 3 Si 0.70 -0.53 32.11 -169.99 -5.46 -5.99 16 4 C -0.05 -0.03 6.21 -35.52 -0.22 -0.25 16 5 C -0.17 -0.12 10.78 -39.82 -0.43 -0.55 16 6 C -0.18 -0.05 10.25 -39.38 -0.40 -0.46 16 7 C 0.02 0.03 7.02 -36.55 -0.26 -0.23 16 8 C 0.03 0.02 5.87 -104.95 -0.62 -0.60 16 9 C -0.14 -0.16 9.65 -39.06 -0.38 -0.54 16 10 C 0.18 0.36 6.71 -38.75 -0.26 0.10 16 11 O -0.47 -1.31 11.56 -40.67 -0.47 -1.78 16 12 C -0.16 -0.23 5.89 -104.79 -0.62 -0.85 16 13 C 0.56 1.47 6.14 -12.58 -0.08 1.40 16 14 O -0.51 -2.99 13.63 -16.70 -0.23 -3.22 16 15 N -0.70 -0.23 3.79 -49.02 -0.19 -0.42 16 16 C 0.20 0.10 0.92 -132.16 -0.12 -0.03 16 17 C -0.07 -0.16 4.69 -104.63 -0.49 -0.65 16 18 C -0.11 -0.17 8.86 -39.59 -0.35 -0.52 16 19 C -0.12 -0.20 10.05 -39.58 -0.40 -0.59 16 20 C -0.12 -0.26 10.05 -39.59 -0.40 -0.66 16 21 C -0.12 -0.33 10.05 -39.59 -0.40 -0.73 16 22 C -0.10 -0.32 8.80 -39.58 -0.35 -0.67 16 23 C -0.13 0.18 7.12 -25.92 -0.18 0.00 16 24 C 0.08 -0.13 5.28 -25.78 -0.14 -0.26 16 25 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 26 O -0.55 0.69 13.09 -35.23 -0.46 0.23 16 27 C -0.17 -0.01 6.62 -25.77 -0.17 -0.18 16 28 C -0.06 0.07 9.46 -39.62 -0.38 -0.31 16 29 C -0.12 0.12 9.48 -39.60 -0.38 -0.26 16 30 O -0.16 -0.24 8.79 4.72 0.04 -0.20 16 31 H 0.38 -1.63 8.70 45.56 0.40 -1.24 16 32 H 0.13 -0.13 7.96 -51.93 -0.41 -0.54 16 33 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 34 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 35 H 0.16 -0.07 8.06 -52.49 -0.42 -0.50 16 36 H 0.16 -0.31 7.24 -52.49 -0.38 -0.69 16 37 H 0.14 0.06 7.90 -52.49 -0.41 -0.35 16 38 H 0.40 -0.41 9.06 45.56 0.41 0.00 16 39 H 0.40 -0.63 6.68 -40.82 -0.27 -0.90 16 40 H 0.12 -0.07 6.38 -52.49 -0.33 -0.41 16 41 H 0.12 -0.04 8.06 -52.48 -0.42 -0.46 16 42 H 0.12 0.05 8.06 -52.48 -0.42 -0.38 16 43 H 0.12 0.17 8.06 -52.49 -0.42 -0.25 16 44 H 0.11 0.33 6.74 -52.49 -0.35 -0.03 16 45 H 0.09 -0.14 8.09 -51.93 -0.42 -0.56 16 46 H 0.11 -0.28 7.88 -51.93 -0.41 -0.69 16 47 H 0.38 -1.66 9.12 45.56 0.42 -1.24 16 48 H 0.10 -0.07 6.09 -51.93 -0.32 -0.39 16 49 H 0.09 0.18 7.30 -51.93 -0.38 -0.20 16 50 H 0.14 -0.49 6.39 -52.48 -0.34 -0.82 16 51 H 0.14 -0.45 6.95 -52.49 -0.37 -0.81 16 LS Contribution 425.81 15.07 6.42 6.42 Total: 0.00 -10.98 425.81 -12.18 -23.15 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -4.48 Total: -11.30 kcal Atomic # 6 Polarization: 0.18 SS G_CDS: -6.90 Total: -6.71 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.19 Total: -0.42 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -1.57 Total: -5.15 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.46 Total: -5.99 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -10.98 -12.18 -23.15 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_12807986.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.207 kcal (2) G-P(sol) polarization free energy of solvation -10.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.184 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.176 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.153 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.360 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds