Wall clock time and date at job start Sat Mar 6 2021 23:49:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.39279 * 121.02795 * 2 1 4 4 C 1.46499 * 134.20170 * 0.31696 * 3 2 1 5 5 C 1.50704 * 126.59381 * 359.93889 * 4 3 2 6 6 O 1.42890 * 109.47283 * 285.02779 * 5 4 3 7 7 Si 1.86304 * 109.46666 * 165.02808 * 5 4 3 8 8 C 1.34173 * 106.80596 * 179.97438 * 4 3 2 9 9 N 1.36956 * 109.95232 * 359.97438 * 8 4 3 10 10 C 1.37153 * 110.11039 * 359.97438 * 9 8 4 11 11 N 1.32828 * 132.96745 * 180.02562 * 10 9 8 12 12 C 1.31304 * 121.88928 * 179.97438 * 11 10 9 13 13 C 1.39744 * 121.03273 * 180.28482 * 2 1 3 14 14 C 1.47670 * 120.45615 * 359.70713 * 13 2 1 15 15 O 1.21576 * 119.99711 * 354.34039 * 14 13 2 16 16 N 1.34768 * 120.00141 * 174.34845 * 14 13 2 17 17 C 1.46504 * 119.99920 * 185.22952 * 16 14 13 18 18 C 1.50700 * 112.85377 * 69.73783 * 17 16 14 19 19 C 1.38230 * 119.99858 * 186.23947 * 18 17 16 20 20 C 1.38238 * 119.99491 * 179.78756 * 19 18 17 21 21 C 1.38235 * 120.00006 * 0.45834 * 20 19 18 22 22 C 1.38227 * 120.00308 * 359.77061 * 21 20 19 23 23 C 1.38232 * 119.99600 * 6.50968 * 18 17 16 24 24 C 1.53779 * 113.61151 * 298.53911 * 17 16 14 25 25 C 1.53782 * 87.08120 * 270.88515 * 24 17 16 26 26 H 1.09007 * 113.61173 * 219.93615 * 25 24 17 27 27 O 1.42901 * 113.61312 * 89.11822 * 25 24 17 28 28 C 1.53780 * 87.08265 * 334.56810 * 25 24 17 29 29 H 1.08998 * 109.46768 * 263.79125 * 1 2 3 30 30 H 1.08998 * 109.47297 * 23.78948 * 1 2 3 31 31 H 1.08994 * 109.47275 * 143.79762 * 1 2 3 32 32 H 1.09001 * 109.47058 * 45.03572 * 5 4 3 33 33 H 0.96704 * 114.00232 * 180.02562 * 6 5 4 34 34 H 1.48496 * 110.00455 * 298.68367 * 7 5 4 35 35 H 1.48504 * 109.99770 * 60.00621 * 7 5 4 36 36 H 1.07999 * 125.02796 * 179.97438 * 8 4 3 37 37 H 0.96996 * 124.94217 * 179.97438 * 9 8 4 38 38 H 1.08007 * 119.30613 * 179.97438 * 12 11 10 39 39 H 0.97004 * 120.00447 * 5.22095 * 16 14 13 40 40 H 1.07993 * 120.00582 * 359.97438 * 19 18 17 41 41 H 1.08001 * 119.99813 * 180.25247 * 20 19 18 42 42 H 1.08005 * 119.99890 * 179.79364 * 21 20 19 43 43 H 1.08000 * 120.00675 * 179.97438 * 22 21 20 44 44 H 1.08001 * 120.00301 * 359.97438 * 23 18 17 45 45 H 1.09002 * 113.62037 * 25.43395 * 24 17 16 46 46 H 1.09007 * 113.61484 * 156.33496 * 24 17 16 47 47 H 0.96706 * 113.99992 * 179.97438 * 27 25 24 48 48 H 1.08998 * 113.61134 * 270.88410 * 28 25 24 49 49 H 1.08995 * 113.61331 * 139.98229 * 28 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1935 0.0000 4 6 1.8515 2.6101 0.0058 5 6 0.4524 3.1703 0.0127 6 8 -0.1244 3.0272 -1.2867 7 14 0.5086 4.9750 0.4720 8 6 2.9945 3.3127 0.0030 9 7 4.0668 2.4606 -0.0036 10 6 3.6347 1.1589 -0.0046 11 7 4.2720 -0.0065 -0.0096 12 6 3.6267 -1.1500 -0.0089 13 6 2.2274 -1.1974 -0.0060 14 6 1.5226 -2.4950 -0.0059 15 8 0.3122 -2.5293 0.1032 16 7 2.2210 -3.6413 -0.1266 17 6 1.5156 -4.9202 -0.2418 18 6 0.7954 -5.0750 -1.5565 19 6 -0.0233 -6.1677 -1.7715 20 6 -0.6874 -6.3074 -2.9759 21 6 -0.5252 -5.3592 -3.9686 22 6 0.2972 -4.2689 -3.7553 23 6 0.9580 -4.1270 -2.5493 24 6 0.6452 -5.2558 0.9807 25 6 1.8880 -5.9345 1.5807 26 1 1.6677 -6.8660 2.1022 27 8 2.7094 -5.0506 2.3462 28 6 2.3782 -6.1357 0.1370 29 1 -0.3633 -0.1111 1.0216 30 1 -0.3634 0.9403 -0.4145 31 1 -0.3633 -0.8292 -0.6069 32 1 -0.1521 2.6289 0.7404 33 1 -1.0268 3.3678 -1.3561 34 1 1.0773 5.1350 1.8344 35 1 1.3300 5.7243 -0.5126 36 1 3.0596 4.3907 0.0055 37 1 4.9964 2.7375 -0.0070 38 1 4.1870 -2.0733 -0.0135 39 1 3.1907 -3.6196 -0.1373 40 1 -0.1466 -6.9108 -0.9976 41 1 -1.3303 -7.1591 -3.1424 42 1 -1.0414 -5.4700 -4.9108 43 1 0.4243 -3.5282 -4.5310 44 1 1.6008 -3.2753 -2.3828 45 1 0.3159 -4.3780 1.5366 46 1 -0.1674 -5.9484 0.7612 47 1 3.4924 -5.4718 2.7265 48 1 2.0394 -7.0688 -0.3130 49 1 3.4479 -5.9681 0.0119 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_12890568.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:49:21 Heat of formation + Delta-G solvation = 31.859171 kcal Electronic energy + Delta-G solvation = -35836.285903 eV Core-core repulsion = 31311.046514 eV Total energy + Delta-G solvation = -4525.239389 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.157 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -42.99424 -42.09991 -40.20354 -39.26696 -38.64147 -37.72197 -36.26998 -35.12618 -34.24565 -32.15585 -31.85748 -31.63912 -30.90893 -28.97130 -26.92938 -26.61291 -25.84208 -24.68369 -24.06983 -23.47328 -22.51889 -21.85775 -20.50607 -20.25680 -19.29835 -18.89440 -18.58638 -18.33624 -17.92815 -17.60225 -17.10803 -16.66182 -16.52552 -16.39771 -15.83803 -15.71454 -15.45249 -15.37299 -15.21827 -15.13766 -14.79305 -14.72168 -14.37286 -14.22533 -14.12660 -13.93200 -13.82045 -13.69216 -13.55502 -13.36897 -13.15803 -13.09018 -12.86962 -12.60825 -12.29952 -12.19394 -11.97939 -11.93022 -11.44816 -11.24075 -11.03403 -10.91441 -10.45928 -10.17681 -10.08566 -9.83610 -9.73720 -9.56935 -9.27811 -4.92313 -0.42418 -0.20164 0.40544 0.48030 1.22585 1.32744 1.50319 1.72812 1.79224 1.97234 1.98924 2.67931 2.79001 3.15170 3.20651 3.31719 3.44958 3.49967 3.58034 3.62236 3.65924 3.73162 3.82537 3.87997 3.98750 4.04503 4.08041 4.11020 4.23267 4.25132 4.38120 4.42348 4.53395 4.61427 4.62787 4.64107 4.70006 4.71026 4.85502 4.86125 4.93183 5.00702 5.05436 5.05630 5.08924 5.14692 5.19576 5.30416 5.44388 5.55678 5.60007 5.61235 5.76718 6.05238 6.08647 6.47553 6.69949 6.93916 6.95443 7.19921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C 0.067 3.933 3 C -0.168 4.168 4 C -0.158 4.158 5 C -0.057 4.057 6 O -0.564 6.564 7 Si 0.788 3.212 8 C 0.067 3.933 9 N -0.562 5.562 10 C 0.288 3.712 11 N -0.515 5.515 12 C 0.182 3.818 13 C -0.239 4.239 14 C 0.577 3.423 15 O -0.549 6.549 16 N -0.687 5.687 17 C 0.192 3.808 18 C -0.082 4.082 19 C -0.118 4.118 20 C -0.123 4.123 21 C -0.132 4.132 22 C -0.134 4.134 23 C -0.121 4.121 24 C -0.136 4.136 25 C 0.086 3.914 26 H 0.093 0.907 27 O -0.565 6.565 28 C -0.148 4.148 29 H 0.078 0.922 30 H 0.088 0.912 31 H 0.083 0.917 32 H 0.079 0.921 33 H 0.401 0.599 34 H -0.288 1.288 35 H -0.279 1.279 36 H 0.201 0.799 37 H 0.437 0.563 38 H 0.192 0.808 39 H 0.411 0.589 40 H 0.145 0.855 41 H 0.144 0.856 42 H 0.136 0.864 43 H 0.124 0.876 44 H 0.105 0.895 45 H 0.057 0.943 46 H 0.114 0.886 47 H 0.397 0.603 48 H 0.121 0.879 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.326 -0.896 0.874 1.293 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C 0.059 3.941 3 C -0.175 4.175 4 C -0.165 4.165 5 C -0.166 4.166 6 O -0.373 6.373 7 Si 0.690 3.310 8 C -0.060 4.060 9 N -0.169 5.169 10 C 0.054 3.946 11 N -0.229 5.229 12 C 0.014 3.986 13 C -0.246 4.246 14 C 0.365 3.635 15 O -0.428 6.428 16 N -0.338 5.338 17 C 0.105 3.895 18 C -0.083 4.083 19 C -0.136 4.136 20 C -0.141 4.141 21 C -0.150 4.150 22 C -0.152 4.152 23 C -0.140 4.140 24 C -0.174 4.174 25 C 0.027 3.973 26 H 0.111 0.889 27 O -0.373 6.373 28 C -0.186 4.186 29 H 0.096 0.904 30 H 0.106 0.894 31 H 0.101 0.899 32 H 0.097 0.903 33 H 0.252 0.748 34 H -0.215 1.215 35 H -0.205 1.205 36 H 0.217 0.783 37 H 0.278 0.722 38 H 0.209 0.791 39 H 0.249 0.751 40 H 0.163 0.837 41 H 0.162 0.838 42 H 0.153 0.847 43 H 0.142 0.858 44 H 0.123 0.877 45 H 0.076 0.924 46 H 0.132 0.868 47 H 0.247 0.753 48 H 0.139 0.861 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 1.146 0.080 0.865 1.438 hybrid contribution 0.848 -0.485 0.022 0.977 sum 1.994 -0.405 0.887 2.220 Atomic orbital electron populations 1.21105 0.88758 1.04414 1.03253 1.20093 0.97556 0.89669 0.86824 1.19741 0.93284 0.94231 1.10273 1.20011 0.94946 0.90239 1.11291 1.24391 0.90288 1.13013 0.88913 1.86486 1.35379 1.86308 1.29151 0.93760 0.88659 0.72482 0.76057 1.22028 0.84961 0.96507 1.02494 1.41500 1.10257 1.01949 1.63155 1.18761 0.89641 0.86656 0.99508 1.66517 1.40775 0.96280 1.19307 1.22971 0.89977 0.95069 0.90600 1.20583 0.95352 0.93701 1.15000 1.17780 0.86555 0.83494 0.75651 1.90732 1.14700 1.87278 1.50088 1.45234 1.10120 1.04319 1.74141 1.19985 0.94103 0.84292 0.91083 1.19985 0.98148 0.95320 0.94826 1.21158 0.96579 0.97707 0.98157 1.21449 0.99562 0.99685 0.93384 1.21428 0.98761 0.94569 1.00270 1.21336 0.97714 0.98723 0.97445 1.20983 1.00244 0.98748 0.93977 1.23541 0.97078 1.01430 0.95394 1.22705 0.91104 0.92862 0.90655 0.88914 1.86498 1.40918 1.39818 1.70114 1.24035 1.01001 0.96732 0.96852 0.90407 0.89389 0.89873 0.90326 0.74825 1.21453 1.20518 0.78284 0.72186 0.79110 0.75141 0.83746 0.83832 0.84658 0.85843 0.87698 0.92410 0.86802 0.75279 0.86089 0.88648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.16 8.46 71.24 0.60 -0.56 16 2 C 0.07 0.75 5.98 -19.25 -0.12 0.64 16 3 C -0.17 -1.81 6.16 -20.19 -0.12 -1.94 16 4 C -0.16 -1.06 5.61 -18.64 -0.10 -1.16 16 5 C -0.06 -0.06 1.87 71.24 0.13 0.08 16 6 O -0.56 -0.70 11.63 -148.98 -1.73 -2.43 16 7 Si 0.79 -3.02 30.80 68.60 2.11 -0.91 16 8 C 0.07 0.22 10.44 82.97 0.87 1.08 16 9 N -0.56 -2.16 6.04 -192.24 -1.16 -3.32 16 10 C 0.29 2.79 8.42 134.02 1.13 3.92 16 11 N -0.52 -4.76 10.37 -191.74 -1.99 -6.75 16 12 C 0.18 1.09 10.68 85.20 0.91 2.00 16 13 C -0.24 -2.18 5.89 -19.99 -0.12 -2.30 16 14 C 0.58 5.23 5.85 86.74 0.51 5.74 16 15 O -0.55 -8.10 11.74 -3.96 -0.05 -8.14 16 16 N -0.69 -1.95 3.79 -426.93 -1.62 -3.57 16 17 C 0.19 0.35 0.96 3.38 0.00 0.36 16 18 C -0.08 -0.40 5.00 -19.87 -0.10 -0.49 16 19 C -0.12 -0.25 8.45 22.27 0.19 -0.06 16 20 C -0.12 -0.28 10.05 22.27 0.22 -0.06 16 21 C -0.13 -0.55 10.05 22.27 0.22 -0.32 16 22 C -0.13 -0.89 10.05 22.27 0.22 -0.67 16 23 C -0.12 -0.94 8.89 22.27 0.20 -0.74 16 24 C -0.14 -0.40 6.56 31.12 0.20 -0.19 16 25 C 0.09 -0.25 5.28 31.12 0.16 -0.09 16 26 H 0.09 -0.62 8.14 -2.38 -0.02 -0.64 16 27 O -0.57 0.59 13.09 -148.98 -1.95 -1.36 16 28 C -0.15 0.71 7.10 31.12 0.22 0.93 16 29 H 0.08 0.74 8.14 -2.39 -0.02 0.72 16 30 H 0.09 0.64 4.80 -2.39 -0.01 0.63 16 31 H 0.08 1.10 5.94 -2.39 -0.01 1.09 16 32 H 0.08 -0.04 7.14 -2.39 -0.02 -0.06 16 33 H 0.40 -3.72 8.74 -74.05 -0.65 -4.37 16 34 H -0.29 -0.47 7.11 99.48 0.71 0.24 16 35 H -0.28 -0.18 7.04 99.48 0.70 0.52 16 36 H 0.20 -0.50 6.31 -2.91 -0.02 -0.52 16 37 H 0.44 -0.92 8.96 -92.71 -0.83 -1.75 16 38 H 0.19 -0.36 6.41 -2.91 -0.02 -0.38 16 39 H 0.41 -0.84 6.75 -92.71 -0.63 -1.47 16 40 H 0.14 -0.47 6.74 -2.91 -0.02 -0.49 16 41 H 0.14 -0.36 8.06 -2.91 -0.02 -0.38 16 42 H 0.14 0.04 8.06 -2.91 -0.02 0.02 16 43 H 0.12 0.56 8.06 -2.91 -0.02 0.53 16 44 H 0.10 0.92 6.35 -2.91 -0.02 0.90 16 45 H 0.06 0.62 6.86 -2.39 -0.02 0.60 16 46 H 0.11 0.00 6.59 -2.38 -0.02 -0.01 16 47 H 0.40 -3.84 9.12 -74.05 -0.68 -4.52 16 48 H 0.12 -0.89 7.39 -2.39 -0.02 -0.91 16 49 H 0.10 -0.67 8.10 -2.39 -0.02 -0.69 16 Total: 0.00 -28.44 390.00 -2.82 -31.25 By element: Atomic # 1 Polarization: -9.28 SS G_CDS: -1.67 Total: -10.94 kcal Atomic # 6 Polarization: 0.92 SS G_CDS: 5.24 Total: 6.16 kcal Atomic # 7 Polarization: -8.87 SS G_CDS: -4.77 Total: -13.64 kcal Atomic # 8 Polarization: -8.20 SS G_CDS: -3.73 Total: -11.93 kcal Atomic # 14 Polarization: -3.02 SS G_CDS: 2.11 Total: -0.91 kcal Total: -28.44 -2.82 -31.25 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_12890568.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.113 kcal (2) G-P(sol) polarization free energy of solvation -28.439 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.254 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.859 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds