Wall clock time and date at job start Sat Mar 6 2021 23:49:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.47349 * 2 1 4 4 C 1.50706 * 109.46605 * 240.00044 * 2 1 3 5 5 C 1.34192 * 126.53842 * 104.96077 * 4 2 1 6 6 N 1.36869 * 109.96522 * 180.02562 * 5 4 2 7 7 C 1.37403 * 109.98144 * 359.97438 * 6 5 4 8 8 C 1.39324 * 133.25540 * 180.02562 * 7 6 5 9 9 C 1.36348 * 120.24077 * 179.97438 * 8 7 6 10 10 C 1.40168 * 120.66834 * 359.76859 * 9 8 7 11 11 C 1.47654 * 119.97788 * 180.28165 * 10 9 8 12 12 O 1.21578 * 120.00188 * 180.23062 * 11 10 9 13 13 N 1.34774 * 119.99886 * 0.22906 * 11 10 9 14 14 C 1.46500 * 120.00214 * 175.02610 * 13 11 10 15 15 C 1.50706 * 112.84644 * 65.09467 * 14 13 11 16 16 C 1.38238 * 119.99416 * 197.56438 * 15 14 13 17 17 C 1.38243 * 119.99382 * 179.78803 * 16 15 14 18 18 C 1.38233 * 119.99864 * 0.46592 * 17 16 15 19 19 C 1.38238 * 120.00177 * 359.76702 * 18 17 16 20 20 C 1.38229 * 119.99870 * 0.02562 * 19 18 17 21 21 C 1.53780 * 113.61513 * 293.89604 * 14 13 11 22 22 C 1.53771 * 87.08132 * 270.88370 * 21 14 13 23 23 H 1.09006 * 113.61284 * 220.01669 * 22 21 14 24 24 O 1.42904 * 113.61895 * 89.20361 * 22 21 14 25 25 C 1.53784 * 113.61770 * 196.28949 * 14 13 11 26 26 C 1.39193 * 120.05077 * 0.51324 * 10 9 8 27 27 C 1.39228 * 119.39072 * 359.46891 * 26 10 9 28 28 H 0.96698 * 113.99693 * 299.99920 * 1 2 3 29 29 H 1.08996 * 109.47010 * 120.00371 * 2 1 3 30 30 H 1.48495 * 109.99974 * 178.68579 * 3 2 1 31 31 H 1.48500 * 109.99802 * 300.00401 * 3 2 1 32 32 H 1.07997 * 125.01555 * 0.05173 * 5 4 2 33 33 H 0.96995 * 125.00410 * 180.02562 * 6 5 4 34 34 H 1.08006 * 119.88197 * 359.97438 * 8 7 6 35 35 H 1.08000 * 119.66800 * 179.97438 * 9 8 7 36 36 H 0.97004 * 120.00408 * 355.03006 * 13 11 10 37 37 H 1.07995 * 120.00395 * 0.02562 * 16 15 14 38 38 H 1.07999 * 119.99652 * 180.25239 * 17 16 15 39 39 H 1.08002 * 119.99815 * 179.78670 * 18 17 16 40 40 H 1.08005 * 119.99723 * 180.02562 * 19 18 17 41 41 H 1.08001 * 119.99793 * 179.97438 * 20 19 18 42 42 H 1.08997 * 113.60977 * 25.43412 * 21 14 13 43 43 H 1.09001 * 113.61069 * 156.33155 * 21 14 13 44 44 H 0.96690 * 114.00384 * 179.97438 * 24 22 21 45 45 H 1.08993 * 113.61836 * 203.67025 * 25 14 13 46 46 H 1.09007 * 113.60908 * 334.56989 * 25 14 13 47 47 H 1.08002 * 120.30284 * 179.74414 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.4599 -0.1386 -2.3234 6 7 2.8016 -1.1004 -3.2353 7 6 2.4951 -2.3455 -2.7415 8 6 2.6343 -3.6351 -3.2502 9 6 2.2320 -4.7105 -2.5149 10 6 1.6785 -4.5373 -1.2388 11 6 1.2536 -5.7131 -0.4532 12 8 0.7696 -5.5632 0.6520 13 7 1.4022 -6.9525 -0.9613 14 6 1.0828 -8.1236 -0.1411 15 6 -0.3802 -8.2105 0.2103 16 6 -0.7938 -9.0195 1.2521 17 6 -2.1353 -9.0958 1.5772 18 6 -3.0640 -8.3706 0.8545 19 6 -2.6507 -7.5652 -0.1904 20 6 -1.3089 -7.4856 -0.5127 21 6 2.0181 -8.3038 1.0662 22 6 2.9242 -9.1327 0.1408 23 1 3.3528 -10.0118 0.6222 24 8 3.8971 -8.3525 -0.5569 25 6 1.6634 -9.4374 -0.6903 26 6 1.5247 -3.2575 -0.7135 27 6 1.9353 -2.1578 -1.4622 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5139 0.8899 30 1 3.5347 1.7702 0.0320 31 1 1.5615 2.4678 -1.2085 32 1 2.5962 0.9236 -2.4626 33 1 3.2017 -0.9284 -4.1019 34 1 3.0626 -3.7835 -4.2306 35 1 2.3438 -5.7060 -2.9184 36 1 1.7207 -7.0693 -1.8700 37 1 -0.0687 -9.5890 1.8144 38 1 -2.4581 -9.7248 2.3937 39 1 -4.1124 -8.4328 1.1063 40 1 -3.3763 -6.9983 -0.7548 41 1 -0.9861 -6.8568 -1.3293 42 1 2.4750 -7.3748 1.4069 43 1 1.5768 -8.8823 1.8779 44 1 4.4703 -8.8683 -1.1402 45 1 1.1254 -10.3252 -0.3581 46 1 1.8343 -9.4229 -1.7668 47 1 1.0949 -3.1192 0.2676 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_13287722.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:49:45 Heat of formation + Delta-G solvation = 20.365549 kcal Electronic energy + Delta-G solvation = -32834.711223 eV Core-core repulsion = 28529.936963 eV Total energy + Delta-G solvation = -4304.774260 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.146 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.46964 -41.93456 -39.74674 -39.14610 -37.74737 -37.32146 -36.16770 -33.95288 -33.31233 -31.68506 -31.50942 -30.73949 -30.34215 -26.99592 -26.39338 -26.00625 -24.44018 -23.43182 -23.30336 -22.36752 -21.50232 -20.53300 -20.10991 -19.04971 -18.67899 -18.31778 -18.25560 -17.80560 -17.31636 -16.78790 -16.33866 -15.98611 -15.75628 -15.60257 -15.42689 -15.27728 -15.12527 -14.99999 -14.78495 -14.73092 -14.53219 -14.24557 -14.09919 -13.89174 -13.72060 -13.52088 -13.40050 -13.23219 -12.82185 -12.64197 -12.51154 -12.30286 -12.09686 -11.97681 -11.81404 -11.75717 -11.37584 -10.97281 -10.74144 -10.64892 -10.15988 -9.89704 -9.64056 -9.40278 -9.26672 -8.79082 -4.99842 0.01366 0.24877 0.58479 0.68067 1.31514 1.45883 1.68379 1.95937 1.99334 2.09559 2.20501 2.93466 3.04038 3.05939 3.43382 3.57450 3.60946 3.65387 3.71758 3.76374 3.79708 3.94936 4.00286 4.16848 4.19288 4.24345 4.28629 4.33046 4.38091 4.44173 4.52651 4.61444 4.63597 4.66995 4.73483 4.79130 4.83000 4.88589 5.00674 5.07157 5.11604 5.21918 5.27918 5.31028 5.43800 5.53061 5.59398 5.63525 5.72310 5.79348 5.92384 6.02422 6.24936 6.37995 6.63064 6.69377 6.77238 7.48332 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.039 4.039 3 Si 0.687 3.313 4 C -0.144 4.144 5 C 0.055 3.945 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.134 4.134 9 C -0.063 4.063 10 C -0.165 4.165 11 C 0.568 3.432 12 O -0.525 6.525 13 N -0.699 5.699 14 C 0.201 3.799 15 C -0.070 4.070 16 C -0.114 4.114 17 C -0.118 4.118 18 C -0.122 4.122 19 C -0.118 4.118 20 C -0.098 4.098 21 C -0.131 4.131 22 C 0.080 3.920 23 H 0.074 0.926 24 O -0.544 6.544 25 C -0.163 4.163 26 C 0.009 3.991 27 C -0.101 4.101 28 H 0.380 0.620 29 H 0.072 0.928 30 H -0.256 1.256 31 H -0.253 1.253 32 H 0.169 0.831 33 H 0.421 0.579 34 H 0.127 0.873 35 H 0.128 0.872 36 H 0.401 0.599 37 H 0.122 0.878 38 H 0.122 0.878 39 H 0.120 0.880 40 H 0.120 0.880 41 H 0.114 0.886 42 H 0.087 0.913 43 H 0.107 0.893 44 H 0.380 0.620 45 H 0.106 0.894 46 H 0.081 0.919 47 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.380 -0.718 -2.150 3.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.150 4.150 3 Si 0.588 3.412 4 C -0.151 4.151 5 C -0.072 4.072 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.155 4.155 9 C -0.083 4.083 10 C -0.169 4.169 11 C 0.357 3.643 12 O -0.401 6.401 13 N -0.351 5.351 14 C 0.114 3.886 15 C -0.071 4.071 16 C -0.132 4.132 17 C -0.136 4.136 18 C -0.140 4.140 19 C -0.136 4.136 20 C -0.116 4.116 21 C -0.169 4.169 22 C 0.020 3.980 23 H 0.092 0.908 24 O -0.349 6.349 25 C -0.201 4.201 26 C -0.011 4.011 27 C -0.106 4.106 28 H 0.227 0.773 29 H 0.090 0.910 30 H -0.180 1.180 31 H -0.178 1.178 32 H 0.186 0.814 33 H 0.259 0.741 34 H 0.145 0.855 35 H 0.146 0.854 36 H 0.237 0.763 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.139 0.861 40 H 0.138 0.862 41 H 0.132 0.868 42 H 0.105 0.895 43 H 0.125 0.875 44 H 0.227 0.773 45 H 0.124 0.876 46 H 0.100 0.900 47 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.405 0.226 -2.116 3.211 hybrid contribution 0.638 -0.838 -1.482 1.818 sum 3.042 -0.612 -3.598 4.751 Atomic orbital electron populations 1.86536 1.17444 1.81817 1.49385 1.24005 0.85424 1.09353 0.96204 0.95013 0.80770 0.77624 0.87799 1.19635 1.07897 0.91374 0.96207 1.21565 1.02043 0.94031 0.89516 1.41675 1.54920 1.04152 1.17983 1.18426 0.99973 0.86443 0.94143 1.19649 1.05932 0.88745 1.01167 1.20587 0.96496 0.98248 0.92965 1.19559 1.07948 0.93227 0.96192 1.18068 0.77728 0.82577 0.85965 1.90809 1.43190 1.85884 1.20240 1.45373 1.68553 1.04203 1.16985 1.19783 0.90213 0.85800 0.92782 1.19702 0.93910 0.97272 0.96220 1.20899 0.96015 0.99390 0.96942 1.21102 0.93074 0.99706 0.99742 1.21162 0.99626 0.97164 0.96036 1.21142 0.95829 0.98887 0.97756 1.20872 0.92829 0.98394 0.99533 1.23522 0.95232 1.01925 0.96267 1.22773 0.87882 0.93948 0.93367 0.90834 1.86536 1.48504 1.37541 1.62336 1.24082 0.97933 0.96648 1.01445 1.20655 0.92448 0.89121 0.98843 1.18889 1.04593 0.92706 0.94398 0.77295 0.91004 1.18021 1.17774 0.81382 0.74133 0.85466 0.85385 0.76251 0.86032 0.85983 0.86148 0.86228 0.86761 0.89475 0.87536 0.77311 0.87567 0.89996 0.84399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.00 12.86 -35.23 -0.45 -1.46 16 2 C -0.04 -0.05 3.05 36.01 0.11 0.06 16 3 Si 0.69 -0.62 30.80 -169.99 -5.24 -5.85 16 4 C -0.14 -0.50 5.61 -102.68 -0.58 -1.07 16 5 C 0.05 0.10 10.43 -16.73 -0.17 -0.08 16 6 N -0.58 -0.40 6.05 -10.61 -0.06 -0.46 16 7 C 0.12 0.31 7.27 -83.96 -0.61 -0.30 16 8 C -0.13 -0.13 10.00 -39.86 -0.40 -0.53 16 9 C -0.06 -0.07 9.46 -39.54 -0.37 -0.44 16 10 C -0.16 -0.60 5.87 -104.97 -0.62 -1.22 16 11 C 0.57 2.55 6.34 -12.42 -0.08 2.47 16 12 O -0.52 -4.14 14.83 5.30 0.08 -4.06 16 13 N -0.70 -1.10 3.76 -48.91 -0.18 -1.28 16 14 C 0.20 0.28 0.92 -132.15 -0.12 0.16 16 15 C -0.07 -0.21 4.51 -104.62 -0.47 -0.68 16 16 C -0.11 -0.25 8.94 -39.58 -0.35 -0.61 16 17 C -0.12 -0.26 10.05 -39.58 -0.40 -0.66 16 18 C -0.12 -0.32 10.05 -39.58 -0.40 -0.72 16 19 C -0.12 -0.39 10.05 -39.58 -0.40 -0.79 16 20 C -0.10 -0.37 8.64 -39.59 -0.34 -0.72 16 21 C -0.13 -0.21 6.66 -25.92 -0.17 -0.38 16 22 C 0.08 -0.07 5.28 -25.78 -0.14 -0.20 16 23 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 24 O -0.54 0.19 13.10 -35.23 -0.46 -0.27 16 25 C -0.16 0.22 7.15 -25.78 -0.18 0.04 16 26 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 27 C -0.10 -0.45 6.34 -105.16 -0.67 -1.11 16 28 H 0.38 -1.24 8.74 45.56 0.40 -0.84 16 29 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 30 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 31 H -0.25 -0.36 7.04 56.52 0.40 0.04 16 32 H 0.17 -0.05 6.30 -52.49 -0.33 -0.38 16 33 H 0.42 -1.11 8.96 -40.82 -0.37 -1.48 16 34 H 0.13 -0.21 8.06 -52.48 -0.42 -0.64 16 35 H 0.13 -0.23 6.37 -52.49 -0.33 -0.56 16 36 H 0.40 -0.28 6.67 -40.82 -0.27 -0.55 16 37 H 0.12 0.01 6.29 -52.49 -0.33 -0.32 16 38 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 39 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 40 H 0.12 0.21 8.06 -52.48 -0.42 -0.21 16 41 H 0.11 0.41 6.89 -52.49 -0.36 0.05 16 42 H 0.09 0.39 7.57 -51.93 -0.39 0.00 16 43 H 0.11 0.03 6.02 -51.93 -0.31 -0.29 16 44 H 0.38 -1.70 9.12 45.56 0.42 -1.29 16 45 H 0.11 -0.22 7.93 -51.93 -0.41 -0.63 16 46 H 0.08 -0.19 8.09 -51.93 -0.42 -0.61 16 47 H 0.14 0.76 7.64 -52.49 -0.40 0.36 16 LS Contribution 386.74 15.07 5.83 5.83 Total: 0.00 -11.66 386.74 -12.08 -23.73 By element: Atomic # 1 Polarization: -4.21 SS G_CDS: -4.85 Total: -9.06 kcal Atomic # 6 Polarization: -0.37 SS G_CDS: -6.74 Total: -7.11 kcal Atomic # 7 Polarization: -1.50 SS G_CDS: -0.25 Total: -1.74 kcal Atomic # 8 Polarization: -4.96 SS G_CDS: -0.84 Total: -5.79 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.24 Total: -5.85 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -11.66 -12.08 -23.73 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_13287722.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.100 kcal (2) G-P(sol) polarization free energy of solvation -11.658 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.076 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.734 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.366 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds