Wall clock time and date at job start Sat Mar 6 2021 23:49:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34659 * 124.85143 * 2 1 4 4 C 1.36777 * 108.39509 * 180.15113 * 3 2 1 5 5 C 1.47264 * 126.94046 * 179.83598 * 4 3 2 6 6 O 1.21628 * 119.99653 * 179.68711 * 5 4 3 7 7 N 1.34777 * 119.99941 * 359.68846 * 5 4 3 8 8 C 1.46508 * 119.99768 * 185.23915 * 7 5 4 9 9 C 1.50701 * 112.90567 * 54.36121 * 8 7 5 10 10 C 1.38231 * 119.99468 * 215.71448 * 9 8 7 11 11 C 1.38236 * 119.99539 * 179.76906 * 10 9 8 12 12 C 1.38236 * 120.00119 * 0.48431 * 11 10 9 13 13 C 1.38231 * 119.99967 * 359.78779 * 12 11 10 14 14 C 1.38231 * 120.00064 * 359.96038 * 13 12 11 15 15 C 1.53779 * 113.61176 * 283.10947 * 8 7 5 16 16 C 1.53780 * 87.07935 * 270.88460 * 15 8 7 17 17 H 1.09001 * 113.68931 * 220.01050 * 16 15 8 18 18 O 1.42903 * 113.61509 * 89.11971 * 16 15 8 19 19 C 1.53774 * 113.60930 * 185.61193 * 8 7 5 20 20 C 1.46686 * 106.11376 * 359.57679 * 4 3 2 21 21 C 1.34484 * 106.33693 * 0.26108 * 20 4 3 22 22 C 1.50691 * 125.57497 * 179.97438 * 21 20 4 23 23 O 1.42905 * 109.47396 * 210.02406 * 22 21 20 24 24 Si 1.86308 * 109.47148 * 330.02050 * 22 21 20 25 25 H 1.08997 * 109.46798 * 270.33792 * 1 2 3 26 26 H 1.09001 * 109.46605 * 30.33541 * 1 2 3 27 27 H 1.08998 * 109.46940 * 150.33212 * 1 2 3 28 28 H 1.08000 * 125.80489 * 0.02562 * 3 2 1 29 29 H 0.96998 * 120.00468 * 5.23392 * 7 5 4 30 30 H 1.07999 * 120.00316 * 359.97438 * 10 9 8 31 31 H 1.08003 * 119.99743 * 180.25145 * 11 10 9 32 32 H 1.08006 * 119.99985 * 179.76813 * 12 11 10 33 33 H 1.07997 * 120.00262 * 179.97438 * 13 12 11 34 34 H 1.07998 * 120.00296 * 179.97438 * 14 13 12 35 35 H 1.09001 * 113.61309 * 25.43174 * 15 8 7 36 36 H 1.08996 * 113.61190 * 156.33469 * 15 8 7 37 37 H 0.96699 * 114.00104 * 82.49544 * 18 16 15 38 38 H 1.09008 * 113.61084 * 203.66100 * 19 8 7 39 39 H 1.09002 * 113.62271 * 334.56634 * 19 8 7 40 40 H 1.08001 * 126.83128 * 180.23142 * 20 4 3 41 41 H 1.08997 * 109.47934 * 90.02341 * 22 21 20 42 42 H 0.96707 * 113.99580 * 59.99251 * 23 22 21 43 43 H 1.48497 * 110.00187 * 179.97438 * 24 22 21 44 44 H 1.48495 * 109.99966 * 301.32293 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5463 0.7176 -0.0034 5 6 4.7285 1.5957 -0.0080 6 8 5.8447 1.1127 -0.0050 7 7 4.5734 2.9345 -0.0156 8 6 5.7444 3.8068 -0.1360 9 6 6.5917 3.4881 -1.3408 10 6 7.9671 3.6075 -1.2695 11 6 8.7447 3.3106 -2.3731 12 6 8.1463 2.9040 -3.5511 13 6 6.7706 2.7901 -3.6241 14 6 5.9933 3.0820 -2.5189 15 6 6.5507 3.9389 1.1668 16 6 5.6372 5.1246 1.5194 17 1 6.1623 5.9587 1.9848 18 8 4.4566 4.7461 2.2303 19 6 5.4158 5.3021 0.0081 20 6 3.5375 -0.7492 0.0048 21 6 2.2448 -1.1198 0.0065 22 6 1.7398 -2.5396 0.0137 23 8 0.4812 -2.6010 -0.6603 24 14 2.9653 -3.6391 -0.8581 25 1 -0.3633 0.0061 1.0276 26 1 -0.3632 0.8870 -0.5191 27 1 -0.3633 -0.8929 -0.5087 28 1 1.8768 2.1241 0.0004 29 1 3.6867 3.3205 0.0587 30 1 8.4342 3.9294 -0.3505 31 1 9.8195 3.3999 -2.3162 32 1 8.7537 2.6757 -4.4145 33 1 6.3031 2.4729 -4.5445 34 1 4.9185 2.9934 -2.5760 35 1 6.4390 3.0870 1.8376 36 1 7.5915 4.2213 1.0093 37 1 4.5895 4.6329 3.1814 38 1 6.1466 5.9573 -0.4662 39 1 4.3881 5.5509 -0.2565 40 1 4.3981 -1.4018 0.0083 41 1 1.6174 -2.8765 1.0431 42 1 0.5151 -2.3148 -1.5834 43 1 2.4792 -5.0422 -0.8572 44 1 3.1650 -3.1710 -2.2531 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_13287730.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:49:51 Heat of formation + Delta-G solvation = 10.442663 kcal Electronic energy + Delta-G solvation = -28682.423709 eV Core-core repulsion = 24761.897581 eV Total energy + Delta-G solvation = -3920.526127 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.50887 -41.82148 -39.47415 -39.11004 -37.95147 -36.11613 -34.10860 -33.56727 -31.84862 -31.65692 -31.18871 -27.65419 -26.97134 -26.49005 -25.51203 -23.78070 -23.33781 -22.34630 -20.99064 -20.73765 -20.08788 -19.08005 -18.46836 -17.87805 -17.45114 -16.92527 -16.90596 -16.74892 -16.21451 -15.84835 -15.74370 -15.51606 -15.39780 -15.15828 -15.06453 -14.80190 -14.52343 -14.26233 -14.13826 -13.74049 -13.57683 -13.41124 -13.40574 -13.22502 -13.00709 -12.86282 -12.40460 -12.35654 -11.99653 -11.97112 -11.86620 -11.43737 -10.97779 -10.90977 -10.73044 -10.00695 -9.80633 -9.60046 -9.49611 -9.20542 -4.91488 0.44423 0.51399 0.77220 1.02314 1.44004 1.61066 1.79073 2.04565 2.25380 2.61136 2.84985 3.13591 3.14302 3.54227 3.55932 3.66794 3.70427 3.85736 3.92508 3.95605 4.07324 4.13085 4.24345 4.32820 4.41021 4.44033 4.47247 4.50930 4.62566 4.65892 4.74274 4.79054 4.81415 4.91263 4.94494 4.98399 5.03115 5.03958 5.11751 5.18386 5.51947 5.57815 5.63241 5.65084 5.81550 5.96733 6.12278 6.22718 6.30453 6.70998 6.86985 7.44619 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.426 5.426 3 C 0.067 3.933 4 C -0.257 4.257 5 C 0.591 3.409 6 O -0.576 6.576 7 N -0.689 5.689 8 C 0.191 3.809 9 C -0.071 4.071 10 C -0.123 4.123 11 C -0.127 4.127 12 C -0.135 4.135 13 C -0.133 4.133 14 C -0.120 4.120 15 C -0.176 4.176 16 C 0.089 3.911 17 H 0.093 0.907 18 O -0.562 6.562 19 C -0.119 4.119 20 C -0.155 4.155 21 C -0.022 4.022 22 C -0.042 4.042 23 O -0.538 6.538 24 Si 0.770 3.230 25 H 0.079 0.921 26 H 0.102 0.898 27 H 0.112 0.888 28 H 0.199 0.801 29 H 0.410 0.590 30 H 0.137 0.863 31 H 0.139 0.861 32 H 0.135 0.865 33 H 0.129 0.871 34 H 0.115 0.885 35 H 0.058 0.942 36 H 0.109 0.891 37 H 0.396 0.604 38 H 0.121 0.879 39 H 0.089 0.911 40 H 0.153 0.847 41 H 0.133 0.867 42 H 0.387 0.613 43 H -0.285 1.285 44 H -0.295 1.295 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.356 4.351 1.609 5.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 N -0.100 5.100 3 C -0.071 4.071 4 C -0.267 4.267 5 C 0.381 3.619 6 O -0.456 6.456 7 N -0.340 5.340 8 C 0.104 3.896 9 C -0.072 4.072 10 C -0.141 4.141 11 C -0.145 4.145 12 C -0.153 4.153 13 C -0.151 4.151 14 C -0.138 4.138 15 C -0.215 4.215 16 C 0.030 3.970 17 H 0.111 0.889 18 O -0.370 6.370 19 C -0.156 4.156 20 C -0.179 4.179 21 C -0.132 4.132 22 C -0.152 4.152 23 O -0.346 6.346 24 Si 0.674 3.326 25 H 0.097 0.903 26 H 0.121 0.879 27 H 0.130 0.870 28 H 0.216 0.784 29 H 0.247 0.753 30 H 0.155 0.845 31 H 0.157 0.843 32 H 0.153 0.847 33 H 0.147 0.853 34 H 0.133 0.867 35 H 0.077 0.923 36 H 0.127 0.873 37 H 0.246 0.754 38 H 0.140 0.860 39 H 0.108 0.892 40 H 0.170 0.830 41 H 0.151 0.849 42 H 0.238 0.762 43 H -0.212 1.212 44 H -0.222 1.222 Dipole moment (debyes) X Y Z Total from point charges -3.298 3.248 0.925 4.721 hybrid contribution -0.828 0.327 -0.209 0.914 sum -4.126 3.575 0.716 5.506 Atomic orbital electron populations 1.22728 0.74723 1.06971 1.04910 1.43703 1.07961 1.04553 1.53774 1.22330 0.89297 0.92984 1.02455 1.20384 0.92204 0.94003 1.20143 1.17572 0.87833 0.81821 0.74661 1.90760 1.27267 1.75870 1.51730 1.45284 1.09491 1.04417 1.74854 1.19953 0.86344 0.91103 0.92183 1.19829 0.94138 0.98974 0.94302 1.21279 0.93012 1.00562 0.99253 1.21424 1.00816 0.99152 0.93117 1.21414 0.95021 1.00013 0.98805 1.21345 0.94557 1.00242 0.98912 1.20994 0.99798 0.99806 0.93249 1.24206 1.00423 0.99957 0.96886 1.22658 0.86001 0.95387 0.92954 0.88928 1.86353 1.33153 1.91684 1.25777 1.23425 1.04492 0.92840 0.94845 1.21769 0.95525 0.93467 1.07184 1.20799 0.90403 0.89765 1.12188 1.24722 0.92435 0.93996 1.04036 1.86536 1.29580 1.88768 1.29719 0.93314 0.84611 0.74744 0.79924 0.90280 0.87926 0.87014 0.78382 0.75261 0.84514 0.84336 0.84707 0.85321 0.86735 0.92285 0.87290 0.75390 0.86048 0.89200 0.82988 0.84946 0.76247 1.21184 1.22213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.31 10.71 127.77 1.37 1.06 16 2 N -0.43 0.34 3.09 -533.24 -1.65 -1.30 16 3 C 0.07 -0.02 10.83 83.92 0.91 0.89 16 4 C -0.26 -1.63 6.29 -19.04 -0.12 -1.75 16 5 C 0.59 5.68 7.03 86.62 0.61 6.29 16 6 O -0.58 -10.32 15.98 -4.12 -0.07 -10.38 16 7 N -0.69 -2.21 4.13 -427.29 -1.76 -3.97 16 8 C 0.19 0.54 0.89 3.38 0.00 0.55 16 9 C -0.07 -0.47 3.95 -19.87 -0.08 -0.55 16 10 C -0.12 -0.72 9.27 22.27 0.21 -0.51 16 11 C -0.13 -0.68 10.05 22.27 0.22 -0.46 16 12 C -0.13 -0.79 10.05 22.27 0.22 -0.56 16 13 C -0.13 -0.93 10.05 22.27 0.22 -0.70 16 14 C -0.12 -0.94 8.94 22.27 0.20 -0.74 16 15 C -0.18 -0.29 6.77 31.12 0.21 -0.07 16 16 C 0.09 -0.27 5.28 31.12 0.16 -0.11 16 17 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 18 O -0.56 1.35 13.06 -148.98 -1.95 -0.60 16 19 C -0.12 0.29 7.16 31.12 0.22 0.52 16 20 C -0.16 -0.94 9.49 23.62 0.22 -0.72 16 21 C -0.02 -0.04 6.14 40.98 0.25 0.21 16 22 C -0.04 0.04 2.98 71.23 0.21 0.26 16 23 O -0.54 0.86 9.95 -148.98 -1.48 -0.63 16 24 Si 0.77 0.16 31.12 68.60 2.13 2.30 16 25 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 26 H 0.10 -1.09 8.13 -2.39 -0.02 -1.11 16 27 H 0.11 -0.74 4.93 -2.39 -0.01 -0.75 16 28 H 0.20 -1.47 7.46 -2.91 -0.02 -1.49 16 29 H 0.41 -0.55 7.56 -92.71 -0.70 -1.25 16 30 H 0.14 0.26 5.67 -2.91 -0.02 0.25 16 31 H 0.14 0.13 8.06 -2.91 -0.02 0.10 16 32 H 0.14 0.24 8.06 -2.91 -0.02 0.21 16 33 H 0.13 0.47 8.06 -2.91 -0.02 0.45 16 34 H 0.11 0.74 7.74 -2.91 -0.02 0.72 16 35 H 0.06 0.40 8.14 -2.39 -0.02 0.38 16 36 H 0.11 -0.06 5.66 -2.39 -0.01 -0.08 16 37 H 0.40 -3.33 9.12 -74.06 -0.68 -4.01 16 38 H 0.12 -0.55 8.09 -2.38 -0.02 -0.57 16 39 H 0.09 -0.30 8.10 -2.39 -0.02 -0.32 16 40 H 0.15 0.83 6.89 -2.91 -0.02 0.81 16 41 H 0.13 -0.39 7.96 -2.39 -0.02 -0.41 16 42 H 0.39 -2.42 8.38 -74.05 -0.62 -3.04 16 43 H -0.29 -1.58 7.11 99.48 0.71 -0.87 16 44 H -0.30 -1.96 7.11 99.48 0.71 -1.25 16 Total: 0.00 -23.81 361.72 -0.61 -24.42 By element: Atomic # 1 Polarization: -12.53 SS G_CDS: -0.90 Total: -13.43 kcal Atomic # 6 Polarization: -1.46 SS G_CDS: 5.05 Total: 3.60 kcal Atomic # 7 Polarization: -1.87 SS G_CDS: -3.41 Total: -5.27 kcal Atomic # 8 Polarization: -8.11 SS G_CDS: -3.49 Total: -11.61 kcal Atomic # 14 Polarization: 0.16 SS G_CDS: 2.13 Total: 2.30 kcal Total: -23.81 -0.61 -24.42 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_13287730.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.860 kcal (2) G-P(sol) polarization free energy of solvation -23.808 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.610 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.418 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.443 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds