Wall clock time and date at job start Sat Mar 6 2021 23:49:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38974 * 119.95523 * 2 1 4 4 O 1.35709 * 119.91276 * 359.97438 * 3 2 1 5 5 C 1.39017 * 120.17485 * 180.02562 * 3 2 1 6 6 C 1.50699 * 119.95450 * 180.02562 * 5 3 2 7 7 O 1.42907 * 109.47342 * 74.97541 * 6 5 3 8 8 Si 1.86309 * 109.47233 * 194.97251 * 6 5 3 9 9 C 1.37685 * 120.08923 * 359.97309 * 5 3 2 10 10 C 1.39746 * 119.91049 * 0.02562 * 9 5 3 11 11 C 1.47609 * 120.08612 * 180.02562 * 10 9 5 12 12 O 1.21580 * 119.99895 * 0.02562 * 11 10 9 13 13 N 1.34783 * 119.99559 * 179.97438 * 11 10 9 14 14 C 1.46505 * 119.99431 * 185.00526 * 13 11 10 15 15 C 1.50699 * 112.84967 * 66.50453 * 14 13 11 16 16 C 1.38237 * 119.99851 * 191.06988 * 15 14 13 17 17 C 1.38236 * 119.99518 * 179.74924 * 16 15 14 18 18 C 1.38236 * 120.00490 * 0.54944 * 17 16 15 19 19 C 1.38240 * 119.99485 * 359.70240 * 18 17 16 20 20 C 1.38235 * 120.00245 * 0.02562 * 19 18 17 21 21 C 1.53783 * 113.61354 * 295.30946 * 14 13 11 22 22 C 1.53775 * 87.17298 * 270.84329 * 21 14 13 23 23 H 1.09003 * 113.61975 * 220.06333 * 22 21 14 24 24 O 1.42905 * 113.61728 * 89.15677 * 22 21 14 25 25 C 1.53782 * 113.61117 * 197.81203 * 14 13 11 26 26 C 1.37723 * 119.95546 * 180.26090 * 2 1 3 27 27 H 1.09004 * 109.47242 * 90.00023 * 1 2 3 28 28 H 1.09004 * 109.47221 * 210.00067 * 1 2 3 29 29 H 1.09006 * 109.47333 * 329.99748 * 1 2 3 30 30 H 0.96694 * 114.00550 * 270.02197 * 4 3 2 31 31 H 1.09001 * 109.47352 * 314.97270 * 6 5 3 32 32 H 0.96698 * 113.99700 * 299.99602 * 7 6 5 33 33 H 1.48495 * 109.99633 * 298.68236 * 8 6 5 34 34 H 1.48497 * 109.99504 * 59.99798 * 8 6 5 35 35 H 1.08006 * 120.04433 * 179.97438 * 9 5 3 36 36 H 0.96993 * 120.00463 * 5.00446 * 13 11 10 37 37 H 1.07992 * 120.00011 * 0.02562 * 16 15 14 38 38 H 1.08000 * 119.99678 * 180.27785 * 17 16 15 39 39 H 1.07996 * 120.00318 * 179.72812 * 18 17 16 40 40 H 1.08000 * 119.99923 * 179.97438 * 19 18 17 41 41 H 1.08000 * 119.99955 * 179.97438 * 20 19 18 42 42 H 1.08998 * 113.61617 * 25.43538 * 21 14 13 43 43 H 1.09005 * 113.61020 * 156.25572 * 21 14 13 44 44 H 0.96691 * 114.00019 * 180.02562 * 24 22 21 45 45 H 1.09000 * 113.60998 * 203.66077 * 25 14 13 46 46 H 1.09003 * 113.61611 * 334.48505 * 25 14 13 47 47 H 1.08002 * 120.04457 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 -0.0005 6 6 4.3385 2.5180 0.0000 7 8 4.2720 3.1040 1.3017 8 14 6.1198 2.2159 -0.4547 9 6 4.2859 0.0208 -0.0005 10 6 3.5918 -1.1921 -0.0005 11 6 4.3328 -2.4687 0.0001 12 8 5.5486 -2.4659 0.0011 13 7 3.6615 -3.6375 0.0007 14 6 4.3928 -4.9021 0.1119 15 6 5.0665 -5.0728 1.4491 16 6 5.9795 -6.0935 1.6378 17 6 6.6012 -6.2468 2.8629 18 6 6.3017 -5.3866 3.9026 19 6 5.3848 -4.3691 3.7154 20 6 4.7672 -4.2122 2.4887 21 6 5.3167 -5.1868 -1.0840 22 6 4.1160 -5.8804 -1.7489 23 1 4.3796 -6.7940 -2.2817 24 8 3.3032 -4.9983 -2.5256 25 6 3.5749 -6.1275 -0.3288 26 6 2.1947 -1.1932 -0.0054 27 1 -0.3634 0.0000 -1.0277 28 1 -0.3634 -0.8900 0.5139 29 1 -0.3634 0.8900 0.5139 30 1 1.3222 2.7176 -0.8840 31 1 3.8878 3.1942 -0.7263 32 1 3.3724 3.2892 1.6042 33 1 6.7545 1.3207 0.5458 34 1 6.2026 1.6066 -1.8063 35 1 5.3660 0.0258 -0.0013 36 1 2.6944 -3.6414 -0.0726 37 1 6.2102 -6.7683 0.8269 38 1 7.3179 -7.0415 3.0090 39 1 6.7842 -5.5091 4.8610 40 1 5.1504 -3.6972 4.5278 41 1 4.0506 -3.4175 2.3426 42 1 5.6454 -4.2878 -1.6056 43 1 6.1377 -5.8644 -0.8499 44 1 2.5463 -5.4287 -2.9459 45 1 3.9190 -7.0634 0.1113 46 1 2.4975 -5.9885 -0.2394 47 1 1.6547 -2.1286 -0.0101 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_13287732.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:49:55 Heat of formation + Delta-G solvation = -65.427722 kcal Electronic energy + Delta-G solvation = -32620.794135 eV Core-core repulsion = 28315.495599 eV Total energy + Delta-G solvation = -4305.298536 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.26530 -41.41766 -39.70034 -39.23816 -37.71715 -37.52982 -36.29705 -34.32960 -33.96358 -31.97875 -31.61600 -31.35722 -28.16325 -27.06918 -26.88303 -26.11053 -24.52314 -23.43797 -22.45778 -22.22387 -21.47071 -20.30898 -19.62479 -18.92288 -18.58893 -18.16081 -17.80767 -17.54520 -16.86388 -16.73707 -16.43456 -15.91940 -15.85390 -15.52208 -15.43169 -15.30661 -15.10537 -15.08731 -14.62966 -14.44882 -14.29328 -14.03739 -13.86665 -13.66166 -13.63332 -13.44056 -13.31821 -13.01678 -12.94850 -12.82629 -12.42046 -12.26709 -12.21018 -12.04663 -11.89316 -11.50598 -11.14725 -11.08037 -11.07224 -10.79307 -10.09633 -10.00538 -9.75949 -9.73266 -9.51927 -4.77504 -0.42868 0.02759 0.46432 0.56122 1.40266 1.65734 1.75167 1.96176 2.09021 2.58077 2.81811 2.92624 2.97256 3.33977 3.36184 3.49088 3.51368 3.56684 3.66354 3.79009 3.87441 3.95299 4.05792 4.08395 4.13544 4.20812 4.25111 4.28507 4.36431 4.46971 4.52167 4.54787 4.56677 4.59915 4.63493 4.69006 4.76421 4.90908 4.93623 5.01973 5.04746 5.07889 5.11027 5.16250 5.18932 5.40110 5.46993 5.60995 5.68429 5.78519 6.13190 6.38924 6.45741 6.55075 6.60348 7.22387 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.111 4.111 3 C 0.143 3.857 4 O -0.490 6.490 5 C -0.142 4.142 6 C -0.072 4.072 7 O -0.532 6.532 8 Si 0.739 3.261 9 C -0.052 4.052 10 C -0.132 4.132 11 C 0.564 3.436 12 O -0.520 6.520 13 N -0.696 5.696 14 C 0.199 3.801 15 C -0.074 4.074 16 C -0.113 4.113 17 C -0.117 4.117 18 C -0.120 4.120 19 C -0.117 4.117 20 C -0.103 4.103 21 C -0.130 4.130 22 C 0.079 3.921 23 H 0.076 0.924 24 O -0.545 6.545 25 C -0.162 4.162 26 C -0.068 4.068 27 H 0.074 0.926 28 H 0.071 0.929 29 H 0.078 0.922 30 H 0.396 0.604 31 H 0.074 0.926 32 H 0.369 0.631 33 H -0.247 1.247 34 H -0.247 1.247 35 H 0.140 0.860 36 H 0.402 0.598 37 H 0.123 0.877 38 H 0.124 0.876 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.113 0.887 42 H 0.090 0.910 43 H 0.106 0.894 44 H 0.380 0.620 45 H 0.107 0.893 46 H 0.082 0.918 47 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.223 -1.683 -2.610 6.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.112 4.112 3 C 0.098 3.902 4 O -0.302 6.302 5 C -0.143 4.143 6 C -0.181 4.181 7 O -0.338 6.338 8 Si 0.637 3.363 9 C -0.071 4.071 10 C -0.135 4.135 11 C 0.351 3.649 12 O -0.396 6.396 13 N -0.348 5.348 14 C 0.112 3.888 15 C -0.075 4.075 16 C -0.131 4.131 17 C -0.135 4.135 18 C -0.138 4.138 19 C -0.135 4.135 20 C -0.122 4.122 21 C -0.168 4.168 22 C 0.020 3.980 23 H 0.093 0.907 24 O -0.351 6.351 25 C -0.200 4.200 26 C -0.087 4.087 27 H 0.092 0.908 28 H 0.090 0.910 29 H 0.097 0.903 30 H 0.254 0.746 31 H 0.092 0.908 32 H 0.217 0.783 33 H -0.172 1.172 34 H -0.172 1.172 35 H 0.157 0.843 36 H 0.239 0.761 37 H 0.141 0.859 38 H 0.142 0.858 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.131 0.869 42 H 0.108 0.892 43 H 0.125 0.875 44 H 0.228 0.772 45 H 0.126 0.874 46 H 0.100 0.900 47 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -2.648 -1.944 -2.051 3.873 hybrid contribution -2.664 -0.883 -0.410 2.836 sum -5.312 -2.827 -2.461 6.501 Atomic orbital electron populations 1.20739 0.89568 1.03875 1.02856 1.20180 0.97310 0.91986 1.01724 1.18280 0.88603 0.85341 0.97992 1.84704 1.75777 1.35771 1.33918 1.20665 0.93536 0.96373 1.03682 1.25156 1.13159 0.90965 0.88814 1.86737 1.32951 1.82565 1.31546 0.93323 0.76630 0.86764 0.79580 1.21001 1.00342 0.90476 0.95263 1.19877 0.93576 0.93442 1.06579 1.18038 0.87305 0.83307 0.76207 1.90822 1.13162 1.87321 1.48312 1.45346 1.10196 1.04177 1.75031 1.19829 0.93311 0.83912 0.91774 1.19713 0.97514 0.96079 0.94191 1.20873 0.96674 0.98003 0.97580 1.21126 0.99703 0.99506 0.93121 1.21190 0.98021 0.95438 0.99181 1.21159 0.96953 0.98140 0.97234 1.20900 0.99820 0.98558 0.92871 1.23507 0.95944 1.02470 0.94864 1.22775 0.92360 0.92849 0.90035 0.90658 1.86528 1.42872 1.37994 1.67664 1.24078 1.00800 0.97509 0.97604 1.21102 0.92496 0.97882 0.97177 0.90774 0.91011 0.90337 0.74601 0.90827 0.78299 1.17189 1.17173 0.84284 0.76124 0.85936 0.85808 0.85977 0.86120 0.86850 0.89171 0.87543 0.77243 0.87434 0.89957 0.84948 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.23 9.78 36.00 0.35 0.58 16 2 C -0.11 -0.02 5.89 -104.54 -0.62 -0.64 16 3 C 0.14 0.13 6.62 -39.02 -0.26 -0.13 16 4 O -0.49 0.57 11.41 -18.83 -0.21 0.36 16 5 C -0.14 -0.35 5.27 -104.54 -0.55 -0.91 16 6 C -0.07 -0.10 2.33 36.01 0.08 -0.02 16 7 O -0.53 -1.33 12.65 -35.23 -0.45 -1.78 16 8 Si 0.74 1.26 30.40 -169.99 -5.17 -3.91 16 9 C -0.05 -0.23 8.20 -39.22 -0.32 -0.55 16 10 C -0.13 -0.42 5.87 -104.96 -0.62 -1.04 16 11 C 0.56 2.43 5.99 -12.43 -0.07 2.36 16 12 O -0.52 -4.16 14.71 5.29 0.08 -4.08 16 13 N -0.70 -0.90 3.81 -48.92 -0.19 -1.09 16 14 C 0.20 0.24 0.94 -132.15 -0.12 0.11 16 15 C -0.07 -0.20 4.83 -104.62 -0.50 -0.70 16 16 C -0.11 -0.20 8.61 -39.58 -0.34 -0.54 16 17 C -0.12 -0.21 10.05 -39.58 -0.40 -0.60 16 18 C -0.12 -0.27 10.05 -39.58 -0.40 -0.67 16 19 C -0.12 -0.36 10.05 -39.58 -0.40 -0.75 16 20 C -0.10 -0.37 8.79 -39.58 -0.35 -0.72 16 21 C -0.13 -0.20 6.58 -25.92 -0.17 -0.37 16 22 C 0.08 -0.08 5.29 -25.83 -0.14 -0.22 16 23 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 24 O -0.55 0.28 13.10 -35.23 -0.46 -0.19 16 25 C -0.16 0.27 7.12 -25.82 -0.18 0.09 16 26 C -0.07 -0.03 9.18 -39.22 -0.36 -0.39 16 27 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.07 -0.20 8.09 -51.93 -0.42 -0.62 16 29 H 0.08 -0.12 7.52 -51.93 -0.39 -0.51 16 30 H 0.40 -2.07 9.06 45.56 0.41 -1.66 16 31 H 0.07 -0.06 7.82 -51.93 -0.41 -0.47 16 32 H 0.37 0.17 8.60 45.56 0.39 0.56 16 33 H -0.25 -1.28 6.81 56.52 0.38 -0.90 16 34 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 35 H 0.14 0.81 4.51 -52.48 -0.24 0.57 16 36 H 0.40 -0.46 6.70 -40.82 -0.27 -0.74 16 37 H 0.12 -0.06 6.67 -52.49 -0.35 -0.41 16 38 H 0.12 -0.03 8.06 -52.49 -0.42 -0.46 16 39 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 40 H 0.12 0.19 8.06 -52.49 -0.42 -0.23 16 41 H 0.11 0.39 6.52 -52.49 -0.34 0.05 16 42 H 0.09 0.43 7.15 -51.93 -0.37 0.06 16 43 H 0.11 0.03 6.32 -51.93 -0.33 -0.30 16 44 H 0.38 -1.79 9.12 45.56 0.42 -1.37 16 45 H 0.11 -0.27 7.72 -51.93 -0.40 -0.67 16 46 H 0.08 -0.22 8.09 -51.93 -0.42 -0.64 16 47 H 0.13 -0.31 6.41 -52.49 -0.34 -0.64 16 LS Contribution 382.18 15.07 5.76 5.76 Total: 0.00 -10.06 382.18 -10.39 -20.45 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -4.38 Total: -10.41 kcal Atomic # 6 Polarization: 0.25 SS G_CDS: -5.36 Total: -5.11 kcal Atomic # 7 Polarization: -0.90 SS G_CDS: -0.19 Total: -1.09 kcal Atomic # 8 Polarization: -4.64 SS G_CDS: -1.04 Total: -5.68 kcal Atomic # 14 Polarization: 1.26 SS G_CDS: -5.17 Total: -3.91 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.06 -10.39 -20.45 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_13287732.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.983 kcal (2) G-P(sol) polarization free energy of solvation -10.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.041 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.387 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.445 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds