Wall clock time and date at job start Sat Mar 6 2021 23:50:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.46870 * 2 1 4 4 C 1.50696 * 109.47162 * 119.99493 * 2 1 3 5 5 C 1.38061 * 119.80428 * 65.00168 * 4 2 1 6 6 C 1.38707 * 120.08403 * 180.02562 * 5 4 2 7 7 O 1.35657 * 120.14763 * 179.97438 * 6 5 4 8 8 C 1.40133 * 119.70039 * 0.23511 * 6 5 4 9 9 C 1.47541 * 120.19169 * 179.72894 * 8 6 5 10 10 O 1.21587 * 119.99993 * 359.97438 * 9 8 6 11 11 N 1.34769 * 119.99912 * 180.02562 * 9 8 6 12 12 C 1.46503 * 120.00048 * 174.90422 * 11 9 8 13 13 C 1.50701 * 112.84400 * 295.30561 * 12 11 9 14 14 C 1.38242 * 119.99948 * 163.98470 * 13 12 11 15 15 C 1.38233 * 120.00310 * 179.78952 * 14 13 12 16 16 C 1.38242 * 119.99626 * 0.43739 * 15 14 13 17 17 C 1.38238 * 120.00112 * 359.81386 * 16 15 14 18 18 C 1.38234 * 120.00372 * 344.25702 * 13 12 11 19 19 C 1.53777 * 113.61899 * 164.11219 * 12 11 9 20 20 C 1.54048 * 86.98535 * 270.83672 * 19 12 11 21 21 H 1.09000 * 113.61874 * 220.02274 * 20 19 12 22 22 O 1.42893 * 113.69271 * 89.12410 * 20 19 12 23 23 C 1.53779 * 87.07828 * 334.56611 * 20 19 12 24 24 C 1.39708 * 119.61812 * 359.51589 * 8 6 5 25 25 C 1.37789 * 119.90679 * 0.50545 * 24 8 6 26 26 H 0.96703 * 113.99863 * 60.00286 * 1 2 3 27 27 H 1.09000 * 109.47301 * 239.99648 * 2 1 3 28 28 H 1.48496 * 110.00019 * 59.99493 * 3 2 1 29 29 H 1.48499 * 109.99729 * 181.31764 * 3 2 1 30 30 H 1.08000 * 119.95394 * 0.02562 * 5 4 2 31 31 H 0.96702 * 113.99825 * 90.00194 * 7 6 5 32 32 H 0.96999 * 120.00712 * 354.89571 * 11 9 8 33 33 H 1.08005 * 119.99694 * 359.97438 * 14 13 12 34 34 H 1.07997 * 120.00265 * 180.27624 * 15 14 13 35 35 H 1.07999 * 119.99625 * 179.83294 * 16 15 14 36 36 H 1.07993 * 119.99766 * 179.97438 * 17 16 15 37 37 H 1.07995 * 119.99915 * 359.97438 * 18 13 12 38 38 H 1.09006 * 113.61118 * 25.42527 * 19 12 11 39 39 H 1.08994 * 113.61713 * 156.33027 * 19 12 11 40 40 H 0.96705 * 114.00400 * 82.47141 * 22 20 19 41 41 H 1.08998 * 113.61962 * 270.88501 * 23 20 19 42 42 H 1.09000 * 113.69208 * 139.98442 * 23 20 19 43 43 H 1.07998 * 120.04844 * 180.22777 * 24 8 6 44 44 H 1.07994 * 119.84976 * 179.74560 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6827 -2.0584 1.3942 6 6 2.1420 -2.7179 2.5248 7 8 1.8980 -4.0424 2.6871 8 6 2.8543 -2.0085 3.5010 9 6 3.3425 -2.6978 4.7107 10 8 3.1268 -3.8846 4.8629 11 7 4.0267 -2.0117 5.6474 12 6 4.4146 -2.6677 6.8986 13 6 3.2306 -3.0703 7.7395 14 6 3.3912 -3.9780 8.7697 15 6 2.3061 -4.3441 9.5439 16 6 1.0585 -3.8093 9.2822 17 6 0.8968 -2.9055 8.2487 18 6 1.9828 -2.5362 7.4772 19 6 5.4972 -1.9077 7.6828 20 6 6.5326 -2.7147 6.8767 21 1 7.3868 -3.0435 7.4685 22 8 6.9149 -2.0931 5.6482 23 6 5.4473 -3.7915 6.7106 24 6 3.1033 -0.6457 3.3202 25 6 2.6393 -0.0064 2.1912 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 -0.8899 28 1 1.5613 2.4680 1.2084 29 1 3.5345 1.7704 -0.0321 30 1 1.1301 -2.6002 0.6409 31 1 2.5822 -4.6166 2.3167 32 1 4.2625 -1.0835 5.4932 33 1 4.3651 -4.3990 8.9716 34 1 2.4324 -5.0498 10.3515 35 1 0.2102 -4.0973 9.8853 36 1 -0.0779 -2.4880 8.0440 37 1 1.8566 -1.8301 6.6699 38 1 5.5172 -0.8379 7.4746 39 1 5.5027 -2.1326 8.7493 40 1 7.5972 -1.4149 5.7461 41 1 5.4391 -4.5305 7.5118 42 1 5.4260 -4.2425 5.7185 43 1 3.6547 -0.0930 4.0664 44 1 2.8288 1.0479 2.0543 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_13422076.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:50:14 Heat of formation + Delta-G solvation = -51.849037 kcal Electronic energy + Delta-G solvation = -30353.848454 eV Core-core repulsion = 26204.676353 eV Total energy + Delta-G solvation = -4149.172101 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.135 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.18754 -41.09363 -39.35615 -39.08891 -38.24465 -37.18899 -36.21139 -34.23222 -32.60170 -31.58842 -31.55140 -31.10797 -27.65386 -27.02240 -25.67755 -23.88665 -23.61886 -23.24905 -22.37793 -21.58084 -20.19486 -19.33059 -18.79516 -18.55313 -18.39542 -17.87828 -17.39874 -16.79649 -16.55509 -16.39054 -16.11650 -15.75341 -15.61696 -15.40068 -15.22999 -15.16417 -14.80729 -14.49326 -14.27783 -14.20472 -13.94048 -13.87899 -13.58248 -13.34334 -13.24555 -13.00332 -12.88351 -12.39250 -12.37763 -12.16816 -12.10467 -11.83598 -11.68614 -11.42929 -11.03683 -10.62889 -10.46452 -10.07782 -9.96075 -9.75398 -9.70705 -9.46777 -5.06072 -0.36366 0.12446 0.51496 0.61272 1.16036 1.54474 1.84213 1.86386 2.04482 2.62648 2.86860 2.99664 3.07858 3.29688 3.37161 3.54631 3.57406 3.66100 3.70715 3.71804 3.82765 4.01162 4.13151 4.18069 4.21661 4.22397 4.28064 4.32898 4.55731 4.57075 4.60742 4.67461 4.70923 4.72946 4.81665 4.94438 4.96263 5.07662 5.13040 5.17005 5.21344 5.22140 5.48278 5.54157 5.65807 5.73239 5.84205 6.18239 6.51879 6.54797 6.56848 6.74846 7.34896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.078 4.078 3 Si 0.687 3.313 4 C -0.033 4.033 5 C -0.126 4.126 6 C 0.175 3.825 7 O -0.474 6.474 8 C -0.161 4.161 9 C 0.563 3.437 10 O -0.504 6.504 11 N -0.700 5.700 12 C 0.201 3.799 13 C -0.073 4.073 14 C -0.113 4.113 15 C -0.117 4.117 16 C -0.121 4.121 17 C -0.117 4.117 18 C -0.102 4.102 19 C -0.163 4.163 20 C 0.079 3.921 21 H 0.075 0.925 22 O -0.546 6.546 23 C -0.130 4.130 24 C -0.063 4.063 25 C -0.142 4.142 26 H 0.385 0.615 27 H 0.079 0.921 28 H -0.249 1.249 29 H -0.253 1.253 30 H 0.142 0.858 31 H 0.397 0.603 32 H 0.400 0.600 33 H 0.123 0.877 34 H 0.123 0.877 35 H 0.122 0.878 36 H 0.120 0.880 37 H 0.113 0.887 38 H 0.081 0.919 39 H 0.107 0.893 40 H 0.380 0.620 41 H 0.106 0.894 42 H 0.089 0.911 43 H 0.133 0.867 44 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.368 5.000 -2.053 6.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.033 4.033 5 C -0.145 4.145 6 C 0.128 3.872 7 O -0.285 6.285 8 C -0.165 4.165 9 C 0.350 3.650 10 O -0.379 6.379 11 N -0.352 5.352 12 C 0.114 3.886 13 C -0.074 4.074 14 C -0.131 4.131 15 C -0.135 4.135 16 C -0.139 4.139 17 C -0.135 4.135 18 C -0.120 4.120 19 C -0.201 4.201 20 C 0.020 3.980 21 H 0.092 0.908 22 O -0.351 6.351 23 C -0.168 4.168 24 C -0.082 4.082 25 C -0.160 4.160 26 H 0.233 0.767 27 H 0.097 0.903 28 H -0.174 1.174 29 H -0.177 1.177 30 H 0.159 0.841 31 H 0.256 0.744 32 H 0.237 0.763 33 H 0.140 0.860 34 H 0.141 0.859 35 H 0.140 0.860 36 H 0.138 0.862 37 H 0.131 0.869 38 H 0.100 0.900 39 H 0.125 0.875 40 H 0.227 0.773 41 H 0.124 0.876 42 H 0.107 0.893 43 H 0.150 0.850 44 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 2.828 4.182 -0.921 5.131 hybrid contribution 0.842 0.182 0.075 0.865 sum 3.670 4.363 -0.846 5.764 Atomic orbital electron populations 1.86508 1.16766 1.81896 1.49800 1.24775 0.86143 1.10733 0.97199 0.95143 0.80803 0.77816 0.87482 1.19405 0.95956 0.93434 0.94505 1.21323 1.01036 0.94445 0.97688 1.18468 0.92383 0.85267 0.91091 1.84774 1.49203 1.12417 1.82083 1.20432 1.03792 0.94803 0.97489 1.17902 0.77943 0.86755 0.82353 1.90840 1.55571 1.14213 1.77276 1.45390 1.57772 1.15365 1.16706 1.19792 0.90639 0.94668 0.83506 1.19705 0.94229 0.97430 0.96030 1.20891 0.99126 0.97474 0.95626 1.21118 0.92825 0.99950 0.99643 1.21181 0.97479 0.97320 0.97878 1.21149 0.98664 0.97979 0.95698 1.20886 0.92335 0.99812 0.98943 1.24088 0.95099 1.00441 1.00463 1.22787 0.95592 0.94040 0.85598 0.90755 1.86522 1.61381 1.57153 1.30016 1.23510 0.92431 0.96017 1.04824 1.21084 0.97301 0.92853 0.96944 1.20811 1.01143 0.99357 0.94646 0.76737 0.90316 1.17352 1.17736 0.84068 0.74424 0.76333 0.85957 0.85868 0.86038 0.86173 0.86863 0.90020 0.87474 0.77253 0.87569 0.89270 0.84963 0.85610 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.02 12.81 -35.23 -0.45 -0.43 16 2 C -0.08 0.04 2.78 36.00 0.10 0.15 16 3 Si 0.69 -1.26 29.83 -169.99 -5.07 -6.33 16 4 C -0.03 -0.06 5.39 -104.57 -0.56 -0.63 16 5 C -0.13 -0.33 9.60 -39.47 -0.38 -0.71 16 6 C 0.17 0.66 6.72 -38.70 -0.26 0.40 16 7 O -0.47 -2.01 11.58 -40.55 -0.47 -2.48 16 8 C -0.16 -0.53 5.89 -104.84 -0.62 -1.15 16 9 C 0.56 2.37 6.15 -12.47 -0.08 2.29 16 10 O -0.50 -3.71 13.65 -16.59 -0.23 -3.94 16 11 N -0.70 -1.06 3.79 -48.95 -0.19 -1.24 16 12 C 0.20 0.27 0.92 -132.16 -0.12 0.15 16 13 C -0.07 -0.22 4.69 -104.62 -0.49 -0.71 16 14 C -0.11 -0.24 8.86 -39.58 -0.35 -0.59 16 15 C -0.12 -0.25 10.05 -39.58 -0.40 -0.65 16 16 C -0.12 -0.32 10.05 -39.58 -0.40 -0.72 16 17 C -0.12 -0.41 10.05 -39.58 -0.40 -0.81 16 18 C -0.10 -0.41 8.80 -39.58 -0.35 -0.75 16 19 C -0.16 0.23 7.14 -25.78 -0.18 0.04 16 20 C 0.08 -0.07 5.28 -25.78 -0.14 -0.21 16 21 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 22 O -0.55 0.25 13.09 -35.23 -0.46 -0.21 16 23 C -0.13 -0.18 6.60 -25.92 -0.17 -0.35 16 24 C -0.06 -0.08 9.53 -39.20 -0.37 -0.45 16 25 C -0.14 -0.23 8.64 -39.63 -0.34 -0.57 16 26 H 0.38 -2.00 8.74 45.56 0.40 -1.60 16 27 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 28 H -0.25 -0.29 7.04 56.52 0.40 0.10 16 29 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 30 H 0.14 0.23 8.06 -52.49 -0.42 -0.20 16 31 H 0.40 0.15 9.06 45.56 0.41 0.57 16 32 H 0.40 -0.26 6.70 -40.82 -0.27 -0.54 16 33 H 0.12 -0.01 6.38 -52.48 -0.33 -0.34 16 34 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 35 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 36 H 0.12 0.25 8.06 -52.49 -0.42 -0.17 16 37 H 0.11 0.44 6.74 -52.49 -0.35 0.09 16 38 H 0.08 -0.19 8.09 -51.93 -0.42 -0.61 16 39 H 0.11 -0.23 7.88 -51.93 -0.41 -0.64 16 40 H 0.38 -1.73 9.12 45.56 0.42 -1.31 16 41 H 0.11 0.02 6.09 -51.93 -0.32 -0.30 16 42 H 0.09 0.38 7.30 -51.93 -0.38 0.00 16 43 H 0.13 -0.22 6.42 -52.49 -0.34 -0.55 16 44 H 0.13 0.07 4.83 -52.49 -0.25 -0.19 16 LS Contribution 361.73 15.07 5.45 5.45 Total: 0.00 -11.27 361.73 -10.50 -21.77 By element: Atomic # 1 Polarization: -3.73 SS G_CDS: -3.58 Total: -7.31 kcal Atomic # 6 Polarization: 0.23 SS G_CDS: -5.51 Total: -5.28 kcal Atomic # 7 Polarization: -1.06 SS G_CDS: -0.19 Total: -1.24 kcal Atomic # 8 Polarization: -5.45 SS G_CDS: -1.61 Total: -7.06 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.07 Total: -6.33 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -11.27 -10.50 -21.77 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_13422076.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.075 kcal (2) G-P(sol) polarization free energy of solvation -11.273 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.774 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds