Wall clock time and date at job start Sat Mar 6 2021 23:50:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.46870 * 2 1 4 4 C 1.50696 * 109.47162 * 119.99493 * 2 1 3 5 5 C 1.38061 * 119.80428 * 65.00168 * 4 2 1 6 6 C 1.38707 * 120.08403 * 180.02562 * 5 4 2 7 7 O 1.35657 * 120.14763 * 179.97438 * 6 5 4 8 8 C 1.40133 * 119.70039 * 0.23511 * 6 5 4 9 9 C 1.47541 * 120.19169 * 179.72894 * 8 6 5 10 10 O 1.21587 * 119.99993 * 359.97438 * 9 8 6 11 11 N 1.34769 * 119.99912 * 180.02562 * 9 8 6 12 12 C 1.46503 * 120.00048 * 174.90422 * 11 9 8 13 13 C 1.50701 * 112.84400 * 295.30561 * 12 11 9 14 14 C 1.38242 * 119.99948 * 163.98470 * 13 12 11 15 15 C 1.38233 * 120.00310 * 179.78952 * 14 13 12 16 16 C 1.38242 * 119.99626 * 0.43739 * 15 14 13 17 17 C 1.38238 * 120.00112 * 359.81386 * 16 15 14 18 18 C 1.38234 * 120.00372 * 344.25702 * 13 12 11 19 19 C 1.53777 * 113.61899 * 164.11219 * 12 11 9 20 20 C 1.54048 * 86.98535 * 270.83672 * 19 12 11 21 21 H 1.09000 * 113.61874 * 220.02274 * 20 19 12 22 22 O 1.42893 * 113.69271 * 89.12410 * 20 19 12 23 23 C 1.53779 * 87.07828 * 334.56611 * 20 19 12 24 24 C 1.39708 * 119.61812 * 359.51589 * 8 6 5 25 25 C 1.37789 * 119.90679 * 0.50545 * 24 8 6 26 26 H 0.96703 * 113.99863 * 60.00286 * 1 2 3 27 27 H 1.09000 * 109.47301 * 239.99648 * 2 1 3 28 28 H 1.48496 * 110.00019 * 59.99493 * 3 2 1 29 29 H 1.48499 * 109.99729 * 181.31764 * 3 2 1 30 30 H 1.08000 * 119.95394 * 0.02562 * 5 4 2 31 31 H 0.96702 * 113.99825 * 90.00194 * 7 6 5 32 32 H 0.96999 * 120.00712 * 354.89571 * 11 9 8 33 33 H 1.08005 * 119.99694 * 359.97438 * 14 13 12 34 34 H 1.07997 * 120.00265 * 180.27624 * 15 14 13 35 35 H 1.07999 * 119.99625 * 179.83294 * 16 15 14 36 36 H 1.07993 * 119.99766 * 179.97438 * 17 16 15 37 37 H 1.07995 * 119.99915 * 359.97438 * 18 13 12 38 38 H 1.09006 * 113.61118 * 25.42527 * 19 12 11 39 39 H 1.08994 * 113.61713 * 156.33027 * 19 12 11 40 40 H 0.96705 * 114.00400 * 82.47141 * 22 20 19 41 41 H 1.08998 * 113.61962 * 270.88501 * 23 20 19 42 42 H 1.09000 * 113.69208 * 139.98442 * 23 20 19 43 43 H 1.07998 * 120.04844 * 180.22777 * 24 8 6 44 44 H 1.07994 * 119.84976 * 179.74560 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6827 -2.0584 1.3942 6 6 2.1420 -2.7179 2.5248 7 8 1.8980 -4.0424 2.6871 8 6 2.8543 -2.0085 3.5010 9 6 3.3425 -2.6978 4.7107 10 8 3.1268 -3.8846 4.8629 11 7 4.0267 -2.0117 5.6474 12 6 4.4146 -2.6677 6.8986 13 6 3.2306 -3.0703 7.7395 14 6 3.3912 -3.9780 8.7697 15 6 2.3061 -4.3441 9.5439 16 6 1.0585 -3.8093 9.2822 17 6 0.8968 -2.9055 8.2487 18 6 1.9828 -2.5362 7.4772 19 6 5.4972 -1.9077 7.6828 20 6 6.5326 -2.7147 6.8767 21 1 7.3868 -3.0435 7.4685 22 8 6.9149 -2.0931 5.6482 23 6 5.4473 -3.7915 6.7106 24 6 3.1033 -0.6457 3.3202 25 6 2.6393 -0.0064 2.1912 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 -0.8899 28 1 1.5613 2.4680 1.2084 29 1 3.5345 1.7704 -0.0321 30 1 1.1301 -2.6002 0.6409 31 1 2.5822 -4.6166 2.3167 32 1 4.2625 -1.0835 5.4932 33 1 4.3651 -4.3990 8.9716 34 1 2.4324 -5.0498 10.3515 35 1 0.2102 -4.0973 9.8853 36 1 -0.0779 -2.4880 8.0440 37 1 1.8566 -1.8301 6.6699 38 1 5.5172 -0.8379 7.4746 39 1 5.5027 -2.1326 8.7493 40 1 7.5972 -1.4149 5.7461 41 1 5.4391 -4.5305 7.5118 42 1 5.4260 -4.2425 5.7185 43 1 3.6547 -0.0930 4.0664 44 1 2.8288 1.0479 2.0543 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_13422076.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:50:13 Heat of formation + Delta-G solvation = -56.072571 kcal Electronic energy + Delta-G solvation = -30354.031600 eV Core-core repulsion = 26204.676353 eV Total energy + Delta-G solvation = -4149.355247 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.135 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.31438 -41.22284 -39.53749 -39.18737 -38.39924 -37.24620 -36.23511 -34.40672 -32.70719 -31.72961 -31.70631 -31.28105 -27.73159 -27.00636 -25.74174 -24.02871 -23.75773 -23.41479 -22.47649 -21.71651 -20.31528 -19.48486 -18.91686 -18.60793 -18.39599 -17.91196 -17.51672 -16.85579 -16.72571 -16.48762 -16.30210 -15.88935 -15.76889 -15.52169 -15.28695 -15.22071 -14.94259 -14.58422 -14.39415 -14.25637 -14.04714 -13.99150 -13.64742 -13.43225 -13.29031 -13.10819 -12.96842 -12.43726 -12.39133 -12.27869 -12.15220 -11.98938 -11.84839 -11.46343 -10.99008 -10.88576 -10.46231 -10.20204 -10.10444 -9.91633 -9.89890 -9.62702 -4.92460 -0.54292 -0.02919 0.34495 0.41666 1.26661 1.59699 1.69439 1.91021 1.95323 2.44336 2.72929 2.97153 3.09118 3.26875 3.40316 3.46108 3.52080 3.62328 3.66952 3.70278 3.79723 3.95170 4.01880 4.03829 4.11808 4.17939 4.24747 4.32972 4.51467 4.53987 4.57133 4.60441 4.65198 4.77581 4.81156 4.82607 4.92418 4.94980 4.97747 5.01996 5.08054 5.08481 5.35019 5.42431 5.48933 5.54697 5.68375 6.02587 6.40488 6.60586 6.86526 6.87767 7.13378 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.091 4.091 3 Si 0.780 3.220 4 C -0.041 4.041 5 C -0.136 4.136 6 C 0.158 3.842 7 O -0.492 6.492 8 C -0.180 4.180 9 C 0.562 3.438 10 O -0.545 6.545 11 N -0.687 5.687 12 C 0.189 3.811 13 C -0.080 4.080 14 C -0.120 4.120 15 C -0.123 4.123 16 C -0.133 4.133 17 C -0.135 4.135 18 C -0.124 4.124 19 C -0.148 4.148 20 C 0.089 3.911 21 H 0.096 0.904 22 O -0.565 6.565 23 C -0.138 4.138 24 C -0.055 4.055 25 C -0.152 4.152 26 H 0.406 0.594 27 H 0.100 0.900 28 H -0.290 1.290 29 H -0.280 1.280 30 H 0.146 0.854 31 H 0.408 0.592 32 H 0.411 0.589 33 H 0.145 0.855 34 H 0.145 0.855 35 H 0.137 0.863 36 H 0.125 0.875 37 H 0.105 0.895 38 H 0.095 0.905 39 H 0.120 0.880 40 H 0.398 0.602 41 H 0.116 0.884 42 H 0.054 0.946 43 H 0.160 0.840 44 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.441 6.205 -1.755 7.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.200 4.200 3 Si 0.684 3.316 4 C -0.042 4.042 5 C -0.154 4.154 6 C 0.112 3.888 7 O -0.306 6.306 8 C -0.183 4.183 9 C 0.349 3.651 10 O -0.423 6.423 11 N -0.339 5.339 12 C 0.102 3.898 13 C -0.081 4.081 14 C -0.138 4.138 15 C -0.141 4.141 16 C -0.151 4.151 17 C -0.153 4.153 18 C -0.142 4.142 19 C -0.185 4.185 20 C 0.030 3.970 21 H 0.114 0.886 22 O -0.373 6.373 23 C -0.176 4.176 24 C -0.074 4.074 25 C -0.170 4.170 26 H 0.258 0.742 27 H 0.117 0.883 28 H -0.218 1.218 29 H -0.207 1.207 30 H 0.164 0.836 31 H 0.268 0.732 32 H 0.249 0.751 33 H 0.162 0.838 34 H 0.163 0.837 35 H 0.155 0.845 36 H 0.143 0.857 37 H 0.123 0.877 38 H 0.113 0.887 39 H 0.138 0.862 40 H 0.249 0.751 41 H 0.134 0.866 42 H 0.072 0.928 43 H 0.177 0.823 44 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.911 5.414 -0.650 6.710 hybrid contribution 0.494 -0.193 -0.033 0.531 sum 4.404 5.221 -0.683 6.865 Atomic orbital electron populations 1.86455 1.16957 1.82575 1.51515 1.25038 0.86208 1.11967 0.96745 0.94078 0.77674 0.74744 0.85072 1.19839 0.95428 0.93359 0.95546 1.21414 1.01418 0.94979 0.97590 1.18731 0.93074 0.85140 0.91871 1.84724 1.50120 1.13172 1.82537 1.20509 1.04741 0.95727 0.97367 1.18090 0.77736 0.86392 0.82846 1.90805 1.57360 1.15883 1.78259 1.45299 1.56633 1.15657 1.16314 1.20039 0.90635 0.95658 0.83488 1.19956 0.94357 0.97394 0.96391 1.21207 1.00264 0.97110 0.95260 1.21465 0.92581 0.99963 1.00071 1.21444 0.98504 0.97216 0.97892 1.21350 0.98924 0.98687 0.96308 1.20974 0.93270 1.00649 0.99293 1.24063 0.92885 1.00908 1.00683 1.22727 0.95803 0.92948 0.85563 0.88631 1.86482 1.62327 1.57981 1.30546 1.23578 0.94128 0.96766 1.03165 1.21355 0.96592 0.92068 0.97373 1.21045 1.01229 0.99928 0.94756 0.74237 0.88258 1.21805 1.20689 0.83588 0.73195 0.75125 0.83779 0.83714 0.84498 0.85731 0.87722 0.88653 0.86169 0.75147 0.86595 0.92761 0.82291 0.84574 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.28 12.81 -148.98 -1.91 -1.63 16 2 C -0.09 0.15 2.78 71.23 0.20 0.35 16 3 Si 0.78 -3.38 29.83 68.60 2.05 -1.33 16 4 C -0.04 -0.18 5.39 -19.83 -0.11 -0.29 16 5 C -0.14 -0.91 9.60 22.34 0.21 -0.69 16 6 C 0.16 1.55 6.72 22.84 0.15 1.70 16 7 O -0.49 -5.61 11.58 -68.80 -0.80 -6.40 16 8 C -0.18 -1.51 5.89 -20.01 -0.12 -1.63 16 9 C 0.56 5.90 6.15 86.70 0.53 6.43 16 10 O -0.55 -9.64 13.65 16.93 0.23 -9.41 16 11 N -0.69 -2.74 3.79 -427.06 -1.62 -4.36 16 12 C 0.19 0.58 0.92 3.38 0.00 0.59 16 13 C -0.08 -0.54 4.69 -19.86 -0.09 -0.63 16 14 C -0.12 -0.51 8.86 22.27 0.20 -0.32 16 15 C -0.12 -0.52 10.05 22.27 0.22 -0.30 16 16 C -0.13 -0.80 10.05 22.27 0.22 -0.57 16 17 C -0.13 -1.16 10.05 22.27 0.22 -0.94 16 18 C -0.12 -1.20 8.80 22.27 0.20 -1.01 16 19 C -0.15 0.60 7.14 31.21 0.22 0.83 16 20 C 0.09 -0.26 5.28 31.21 0.16 -0.09 16 21 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 22 O -0.57 0.93 13.09 -148.98 -1.95 -1.02 16 23 C -0.14 -0.47 6.60 31.12 0.21 -0.27 16 24 C -0.06 -0.17 9.53 22.52 0.21 0.04 16 25 C -0.15 -0.54 8.64 22.24 0.19 -0.35 16 26 H 0.41 -4.61 8.74 -74.06 -0.65 -5.26 16 27 H 0.10 -0.58 7.96 -2.39 -0.02 -0.60 16 28 H -0.29 -0.74 7.04 99.48 0.70 -0.04 16 29 H -0.28 -0.05 7.11 99.48 0.71 0.65 16 30 H 0.15 0.68 8.06 -2.91 -0.02 0.66 16 31 H 0.41 1.61 9.06 -74.06 -0.67 0.94 16 32 H 0.41 -0.48 6.70 -92.71 -0.62 -1.10 16 33 H 0.14 -0.15 6.38 -2.91 -0.02 -0.17 16 34 H 0.15 -0.12 8.06 -2.91 -0.02 -0.14 16 35 H 0.14 0.26 8.06 -2.91 -0.02 0.23 16 36 H 0.12 0.77 8.06 -2.91 -0.02 0.75 16 37 H 0.10 1.07 6.74 -2.91 -0.02 1.05 16 38 H 0.09 -0.62 8.09 -2.38 -0.02 -0.64 16 39 H 0.12 -0.76 7.88 -2.39 -0.02 -0.78 16 40 H 0.40 -4.18 9.12 -74.05 -0.68 -4.86 16 41 H 0.12 0.05 6.09 -2.39 -0.01 0.04 16 42 H 0.05 0.59 7.30 -2.39 -0.02 0.57 16 43 H 0.16 -0.57 6.42 -2.91 -0.02 -0.59 16 44 H 0.14 0.13 4.83 -2.91 -0.01 0.12 16 Total: 0.00 -28.52 361.73 -2.63 -31.15 By element: Atomic # 1 Polarization: -8.37 SS G_CDS: -1.48 Total: -9.85 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: 2.85 Total: 2.85 kcal Atomic # 7 Polarization: -2.74 SS G_CDS: -1.62 Total: -4.36 kcal Atomic # 8 Polarization: -14.04 SS G_CDS: -4.42 Total: -18.46 kcal Atomic # 14 Polarization: -3.38 SS G_CDS: 2.05 Total: -1.33 kcal Total: -28.52 -2.63 -31.15 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_13422076.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.925 kcal (2) G-P(sol) polarization free energy of solvation -28.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.628 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.148 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.073 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds