Wall clock time and date at job start Sat Mar 6 2021 23:50:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47104 * 2 1 4 4 C 1.50704 * 109.47000 * 120.00018 * 2 1 3 5 5 C 1.34175 * 125.44215 * 64.71161 * 4 2 1 6 6 C 1.47015 * 105.95859 * 179.87046 * 5 4 2 7 7 C 1.47374 * 127.19805 * 180.15462 * 6 5 4 8 8 O 1.21614 * 119.99759 * 0.30938 * 7 6 5 9 9 N 1.34777 * 120.00698 * 180.31372 * 7 6 5 10 10 C 1.46495 * 120.00589 * 174.76643 * 9 7 6 11 11 C 1.50698 * 112.84679 * 292.21337 * 10 9 7 12 12 C 1.38236 * 120.00283 * 165.09540 * 11 10 9 13 13 C 1.38236 * 120.00181 * 179.73961 * 12 11 10 14 14 C 1.38237 * 119.99723 * 0.53400 * 13 12 11 15 15 C 1.38231 * 120.00001 * 359.74118 * 14 13 12 16 16 C 1.38228 * 120.00261 * 359.97438 * 15 14 13 17 17 C 1.53774 * 113.61575 * 160.90466 * 10 9 7 18 18 C 1.53778 * 87.07988 * 270.88047 * 17 10 9 19 19 H 1.09006 * 113.61177 * 220.01523 * 18 17 10 20 20 O 1.42901 * 113.61387 * 89.11922 * 18 17 10 21 21 C 1.53768 * 87.08265 * 334.56950 * 18 17 10 22 22 C 1.36428 * 105.61164 * 0.39284 * 6 5 4 23 23 O 1.33650 * 108.39768 * 359.76224 * 22 6 5 24 24 H 0.96698 * 113.99798 * 300.00126 * 1 2 3 25 25 H 1.08998 * 109.46866 * 239.99544 * 2 1 3 26 26 H 1.48504 * 109.99787 * 299.99269 * 3 2 1 27 27 H 1.48490 * 110.00204 * 61.31736 * 3 2 1 28 28 H 1.07998 * 127.01931 * 0.02562 * 5 4 2 29 29 H 0.97003 * 119.99551 * 354.76183 * 9 7 6 30 30 H 1.08003 * 119.99538 * 359.97438 * 12 11 10 31 31 H 1.07996 * 120.00384 * 180.29509 * 13 12 11 32 32 H 1.07998 * 119.99748 * 179.76661 * 14 13 12 33 33 H 1.08004 * 119.99651 * 180.02562 * 15 14 13 34 34 H 1.07998 * 120.00134 * 179.97438 * 16 15 14 35 35 H 1.09000 * 113.61597 * 25.43048 * 17 10 9 36 36 H 1.09006 * 113.61101 * 156.33353 * 17 10 9 37 37 H 0.96700 * 114.00022 * 82.49867 * 20 18 17 38 38 H 1.09005 * 113.61609 * 270.88008 * 21 18 17 39 39 H 1.09004 * 113.69563 * 139.99519 * 21 18 17 40 40 H 1.08000 * 125.79494 * 179.76128 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7504 -2.0110 1.5064 6 6 2.4126 -2.2462 2.7977 7 6 2.5007 -3.5192 3.5350 8 8 1.9943 -4.5246 3.0750 9 7 3.1426 -3.5693 4.7191 10 6 3.1324 -4.8047 5.5063 11 6 1.7671 -5.1423 6.0476 12 6 1.5127 -6.4085 6.5406 13 6 0.2619 -6.7166 7.0421 14 6 -0.7378 -5.7618 7.0404 15 6 -0.4850 -4.4974 6.5422 16 6 0.7674 -4.1875 6.0461 17 6 4.2493 -4.8724 6.5610 18 6 5.1299 -5.5098 5.4733 19 1 5.7558 -6.3236 5.8397 20 8 5.8560 -4.5574 4.6937 21 6 3.8276 -5.9855 4.8084 22 6 2.9238 -1.0384 3.1736 23 8 2.6260 -0.1418 2.2283 24 1 -0.3933 0.4417 0.7650 25 1 1.7923 -0.5139 -0.8899 26 1 1.5616 2.4678 -1.2086 27 1 1.5879 2.4585 1.2241 28 1 1.2275 -2.7373 0.9019 29 1 3.6114 -2.7872 5.0501 30 1 2.2924 -7.1559 6.5374 31 1 0.0645 -7.7043 7.4316 32 1 -1.7161 -6.0036 7.4287 33 1 -1.2660 -3.7513 6.5413 34 1 0.9647 -3.1998 5.6565 35 1 4.6001 -3.8938 6.8889 36 1 4.0262 -5.5431 7.3908 37 1 6.6761 -4.2544 5.1067 38 1 3.4892 -6.9606 5.1590 39 1 3.8366 -5.9065 3.7213 40 1 3.4753 -0.8406 4.0808 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_13456056.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:50:34 Heat of formation + Delta-G solvation = -24.418198 kcal Electronic energy + Delta-G solvation = -26579.306385 eV Core-core repulsion = 22715.087535 eV Total energy + Delta-G solvation = -3864.218851 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.119 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -43.68630 -42.02475 -39.53756 -39.15172 -38.13576 -36.24002 -34.37494 -33.54180 -31.91424 -31.61736 -31.44179 -27.06769 -26.84107 -26.06033 -24.52245 -23.41638 -22.41430 -22.20261 -21.03332 -20.18467 -19.39298 -18.65586 -18.03164 -17.71371 -17.50986 -17.22459 -16.88322 -16.42790 -16.15884 -15.89687 -15.66040 -15.48810 -15.22429 -14.98992 -14.52833 -14.29817 -14.13149 -14.00015 -13.89696 -13.57948 -13.56792 -13.26179 -12.94739 -12.91003 -12.40244 -12.20364 -12.07406 -11.88097 -11.49008 -11.04927 -10.92261 -10.78043 -10.71588 -10.02644 -9.78297 -9.75915 -9.51916 -4.99941 0.28525 0.46670 0.56052 0.93819 1.13015 1.48842 1.72631 1.92180 2.03015 2.44535 2.82887 2.99911 3.14794 3.37086 3.40055 3.55307 3.61268 3.68125 3.77268 3.94222 4.08142 4.13817 4.22124 4.27751 4.33687 4.45708 4.55031 4.59500 4.62358 4.63777 4.69489 4.79793 4.83183 4.93386 5.10822 5.11289 5.16894 5.26047 5.45050 5.61211 5.68200 5.79909 5.85811 6.13287 6.23598 6.52877 6.58358 7.32830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.705 3.295 4 C -0.058 4.058 5 C -0.122 4.122 6 C -0.234 4.234 7 C 0.592 3.408 8 O -0.519 6.519 9 N -0.699 5.699 10 C 0.201 3.799 11 C -0.074 4.074 12 C -0.112 4.112 13 C -0.117 4.117 14 C -0.121 4.121 15 C -0.118 4.118 16 C -0.104 4.104 17 C -0.162 4.162 18 C 0.079 3.921 19 H 0.075 0.925 20 O -0.545 6.545 21 C -0.131 4.131 22 C 0.030 3.970 23 O -0.167 6.167 24 H 0.380 0.620 25 H 0.138 0.862 26 H -0.249 1.249 27 H -0.256 1.256 28 H 0.161 0.839 29 H 0.400 0.600 30 H 0.123 0.877 31 H 0.124 0.876 32 H 0.122 0.878 33 H 0.120 0.880 34 H 0.114 0.886 35 H 0.082 0.918 36 H 0.106 0.894 37 H 0.380 0.620 38 H 0.106 0.894 39 H 0.092 0.908 40 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.860 2.225 4.394 6.919 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.145 4.145 3 Si 0.604 3.396 4 C -0.106 4.106 5 C -0.141 4.141 6 C -0.238 4.238 7 C 0.380 3.620 8 O -0.395 6.395 9 N -0.350 5.350 10 C 0.114 3.886 11 C -0.075 4.075 12 C -0.131 4.131 13 C -0.135 4.135 14 C -0.139 4.139 15 C -0.136 4.136 16 C -0.122 4.122 17 C -0.200 4.200 18 C 0.020 3.980 19 H 0.092 0.908 20 O -0.350 6.350 21 C -0.169 4.169 22 C -0.040 4.040 23 O -0.063 6.063 24 H 0.228 0.772 25 H 0.155 0.845 26 H -0.173 1.173 27 H -0.180 1.180 28 H 0.179 0.821 29 H 0.235 0.765 30 H 0.141 0.859 31 H 0.142 0.858 32 H 0.140 0.860 33 H 0.138 0.862 34 H 0.132 0.868 35 H 0.100 0.900 36 H 0.125 0.875 37 H 0.227 0.773 38 H 0.124 0.876 39 H 0.110 0.890 40 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges 3.912 2.247 3.073 5.459 hybrid contribution -0.466 0.012 1.269 1.352 sum 3.446 2.259 4.343 5.986 Atomic orbital electron populations 1.86680 1.16682 1.80130 1.49185 1.24397 0.83997 1.12282 0.93787 0.94433 0.91298 0.73015 0.80901 1.22652 1.01829 0.93420 0.92686 1.22530 1.00972 0.95321 0.95321 1.21541 1.08805 0.94296 0.99193 1.17165 0.77814 0.87075 0.79981 1.90823 1.46303 1.35277 1.67116 1.45274 1.55188 1.14149 1.20406 1.19790 0.91119 0.85891 0.91828 1.19748 0.94691 0.94229 0.98846 1.20907 0.97369 0.95557 0.99242 1.21133 0.93208 0.99480 0.99661 1.21187 0.99300 0.93615 0.99796 1.21147 0.96793 0.96957 0.98689 1.20890 0.93018 0.99151 0.99138 1.24040 0.95598 1.03111 0.97249 1.22730 0.92647 0.91144 0.91486 0.90762 1.86533 1.39364 1.61696 1.47387 1.23514 0.92614 0.97642 1.03114 1.24451 0.99540 0.86755 0.93266 1.83686 1.57322 1.38884 1.26367 0.77161 0.84487 1.17348 1.18019 0.82125 0.76510 0.85894 0.85833 0.86031 0.86178 0.86756 0.89967 0.87519 0.77264 0.87615 0.88981 0.77100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.52 12.88 -35.23 -0.45 -0.97 16 2 C -0.04 0.01 2.97 36.01 0.11 0.12 16 3 Si 0.70 -0.84 32.09 -169.99 -5.46 -6.29 16 4 C -0.06 -0.05 6.18 -35.74 -0.22 -0.27 16 5 C -0.12 -0.31 10.90 -37.46 -0.41 -0.72 16 6 C -0.23 -0.44 6.31 -103.28 -0.65 -1.09 16 7 C 0.59 2.00 6.32 -12.54 -0.08 1.92 16 8 O -0.52 -3.88 15.44 5.27 0.08 -3.80 16 9 N -0.70 -0.18 3.75 -49.01 -0.18 -0.37 16 10 C 0.20 0.10 0.94 -132.17 -0.12 -0.02 16 11 C -0.07 -0.15 4.83 -104.62 -0.51 -0.66 16 12 C -0.11 -0.16 8.80 -39.58 -0.35 -0.51 16 13 C -0.12 -0.17 10.05 -39.58 -0.40 -0.57 16 14 C -0.12 -0.22 10.05 -39.58 -0.40 -0.62 16 15 C -0.12 -0.28 10.05 -39.59 -0.40 -0.67 16 16 C -0.10 -0.28 8.96 -39.58 -0.35 -0.63 16 17 C -0.16 0.36 7.13 -25.92 -0.18 0.17 16 18 C 0.08 -0.11 5.28 -25.93 -0.14 -0.25 16 19 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 20 O -0.54 0.53 13.09 -35.23 -0.46 0.07 16 21 C -0.13 -0.15 6.56 -25.93 -0.17 -0.32 16 22 C 0.03 -0.03 11.61 30.08 0.35 0.32 16 23 O -0.17 -0.01 8.90 7.64 0.07 0.06 16 24 H 0.38 -0.71 8.70 45.56 0.40 -0.31 16 25 H 0.14 -0.22 7.96 -51.93 -0.41 -0.63 16 26 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 27 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 28 H 0.16 0.51 8.06 -52.49 -0.42 0.09 16 29 H 0.40 -1.04 7.66 -40.82 -0.31 -1.35 16 30 H 0.12 -0.08 6.44 -52.48 -0.34 -0.42 16 31 H 0.12 -0.06 8.06 -52.49 -0.42 -0.49 16 32 H 0.12 0.01 8.06 -52.49 -0.42 -0.42 16 33 H 0.12 0.10 8.06 -52.48 -0.42 -0.33 16 34 H 0.11 0.24 6.78 -52.49 -0.36 -0.11 16 35 H 0.08 -0.27 8.10 -51.93 -0.42 -0.69 16 36 H 0.11 -0.30 7.85 -51.93 -0.41 -0.71 16 37 H 0.38 -1.95 9.12 45.56 0.42 -1.54 16 38 H 0.11 -0.01 6.14 -51.93 -0.32 -0.33 16 39 H 0.09 0.40 7.03 -51.93 -0.36 0.04 16 40 H 0.21 -1.17 7.48 -52.49 -0.39 -1.56 16 LS Contribution 340.93 15.07 5.14 5.14 Total: 0.00 -10.24 340.93 -9.01 -19.25 By element: Atomic # 1 Polarization: -5.47 SS G_CDS: -3.82 Total: -9.29 kcal Atomic # 6 Polarization: 0.12 SS G_CDS: -3.92 Total: -3.80 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.18 Total: -0.37 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -0.77 Total: -4.64 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.46 Total: -6.29 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -10.24 -9.01 -19.25 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_13456056.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.165 kcal (2) G-P(sol) polarization free energy of solvation -10.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.013 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.254 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.418 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds