Wall clock time and date at job start Sat Mar 6 2021 23:50:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86301 * 109.47265 * 2 1 4 4 C 1.50699 * 109.47025 * 239.99623 * 2 1 3 5 5 C 1.31123 * 118.54086 * 120.00103 * 4 2 1 6 6 N 1.38922 * 121.84523 * 180.42699 * 5 4 2 7 7 C 1.47026 * 118.88596 * 346.68921 * 6 5 4 8 8 C 1.50700 * 109.82463 * 163.20011 * 7 6 5 9 9 O 1.21276 * 119.99731 * 340.00151 * 8 7 6 10 10 N 1.34780 * 120.00099 * 159.99165 * 8 7 6 11 11 C 1.46496 * 120.00055 * 184.84114 * 10 8 7 12 12 C 1.50708 * 112.85141 * 305.22453 * 11 10 8 13 13 C 1.38233 * 119.99760 * 334.35726 * 12 11 10 14 14 C 1.38237 * 119.99794 * 179.80950 * 13 12 11 15 15 C 1.38235 * 119.99836 * 0.39224 * 14 13 12 16 16 C 1.38235 * 119.99945 * 359.86389 * 15 14 13 17 17 C 1.38228 * 120.00017 * 154.63008 * 12 11 10 18 18 C 1.53784 * 113.61530 * 174.02911 * 11 10 8 19 19 C 1.53775 * 87.07908 * 270.80073 * 18 11 10 20 20 H 1.09005 * 113.61602 * 220.01772 * 19 18 11 21 21 O 1.42901 * 113.61602 * 89.20214 * 19 18 11 22 22 C 1.53777 * 113.69258 * 76.49029 * 11 10 8 23 23 C 1.53540 * 107.66320 * 43.66065 * 7 6 5 24 24 C 1.50196 * 118.55356 * 300.02254 * 4 2 1 25 25 H 0.96699 * 113.99974 * 59.99904 * 1 2 3 26 26 H 1.09008 * 109.47155 * 119.99892 * 2 1 3 27 27 H 1.48500 * 109.99770 * 59.99875 * 3 2 1 28 28 H 1.48494 * 110.00144 * 181.31678 * 3 2 1 29 29 H 1.07999 * 119.07522 * 0.40389 * 5 4 2 30 30 H 0.97000 * 120.55861 * 166.70156 * 6 5 4 31 31 H 1.09006 * 109.81814 * 284.05901 * 7 6 5 32 32 H 0.96997 * 119.99784 * 4.85315 * 10 8 7 33 33 H 1.08003 * 119.99946 * 359.97438 * 13 12 11 34 34 H 1.07999 * 119.99866 * 180.23760 * 14 13 12 35 35 H 1.08002 * 119.99729 * 179.83061 * 15 14 13 36 36 H 1.07996 * 119.99443 * 179.97438 * 16 15 14 37 37 H 1.08002 * 120.00096 * 359.97438 * 17 12 11 38 38 H 1.08998 * 113.61384 * 156.25141 * 18 11 10 39 39 H 1.09000 * 113.61319 * 25.34903 * 18 11 10 40 40 H 0.96697 * 114.00058 * 181.53102 * 21 19 18 41 41 H 1.09001 * 113.61509 * 334.58705 * 22 11 10 42 42 H 1.09000 * 113.61963 * 203.67262 * 22 11 10 43 43 H 1.08999 * 109.62373 * 58.77162 * 23 7 6 44 44 H 1.08992 * 109.62369 * 179.33344 * 23 7 6 45 45 H 1.08999 * 109.33102 * 280.18835 * 24 4 2 46 46 H 1.09001 * 109.32553 * 39.83584 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.6832 -0.0460 -2.0745 6 7 3.1760 -0.6306 -3.2344 7 6 3.1006 -2.0916 -3.3807 8 6 3.2940 -2.4711 -4.8263 9 8 3.1170 -1.6471 -5.6984 10 7 3.6640 -3.7260 -5.1499 11 6 3.9550 -4.0673 -6.5445 12 6 2.8213 -3.7299 -7.4784 13 6 1.5257 -3.6724 -7.0001 14 6 0.4862 -3.3591 -7.8559 15 6 0.7416 -3.1113 -9.1917 16 6 2.0366 -3.1741 -9.6710 17 6 3.0764 -3.4836 -8.8144 18 6 4.5014 -5.4930 -6.7287 19 6 5.9045 -4.8966 -6.5282 20 1 6.6586 -5.3220 -7.1905 21 8 6.3220 -4.8621 -5.1620 22 6 5.3243 -3.5641 -7.0310 23 6 1.7091 -2.5359 -2.9076 24 6 1.5483 -2.1482 -1.4359 25 1 -0.3933 0.4417 -0.7650 26 1 1.7924 -0.5138 0.8901 27 1 1.5615 2.4678 1.2085 28 1 3.5346 1.7703 -0.0321 29 1 2.9258 0.9848 -1.8622 30 1 3.5636 -0.0841 -3.9358 31 1 3.8686 -2.5645 -2.7686 32 1 3.7373 -4.4033 -4.4594 33 1 1.3258 -3.8697 -5.9572 34 1 -0.5256 -3.3104 -7.4814 35 1 -0.0708 -2.8692 -9.8609 36 1 2.2360 -2.9808 -10.7147 37 1 4.0883 -3.5325 -9.1890 38 1 4.3376 -5.8977 -7.7275 39 1 4.2022 -6.1808 -5.9379 40 1 7.1940 -4.4666 -5.0271 41 1 5.6895 -2.6949 -6.4841 42 1 5.3855 -3.4416 -8.1123 43 1 0.9438 -2.0382 -3.5030 44 1 1.6142 -3.6165 -3.0139 45 1 2.1884 -2.7832 -0.8234 46 1 0.5091 -2.2905 -1.1394 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_15413834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:50:44 Heat of formation + Delta-G solvation = -23.424214 kcal Electronic energy + Delta-G solvation = -29499.533917 eV Core-core repulsion = 25550.227734 eV Total energy + Delta-G solvation = -3949.306184 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.23575 -40.68425 -39.30794 -39.08128 -37.27555 -36.29518 -34.24368 -33.14272 -32.78083 -31.66527 -31.62750 -27.72064 -27.10959 -25.77960 -25.19281 -23.77864 -23.33336 -22.56968 -21.72391 -20.33713 -19.37009 -19.13607 -18.56729 -17.99849 -17.91588 -17.14309 -16.76054 -16.35296 -16.25160 -15.86285 -15.65146 -15.60088 -15.29310 -15.26388 -15.14561 -14.98674 -14.41837 -14.25751 -14.04222 -13.91423 -13.83986 -13.63712 -13.40394 -13.10171 -12.95710 -12.82977 -12.49877 -12.07618 -12.06632 -11.90651 -11.89280 -11.70483 -11.61064 -11.27740 -11.00742 -10.72377 -10.15137 -10.09938 -9.72302 -9.46911 -8.42649 -4.96143 0.49575 0.59513 1.36136 1.45676 1.53815 1.68223 1.85313 2.06411 2.62131 2.85363 2.87835 3.36942 3.43752 3.53870 3.64619 3.68571 3.72447 3.77235 3.84960 4.03233 4.07441 4.14479 4.21657 4.27645 4.33479 4.38493 4.51629 4.57181 4.59319 4.62970 4.66191 4.67860 4.76825 4.77830 4.86419 4.88334 5.04275 5.12345 5.18285 5.19808 5.30572 5.41026 5.58196 5.62821 5.70677 5.77913 6.15864 6.25165 6.44480 6.50446 6.77836 6.85939 7.17899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.042 4.042 3 Si 0.671 3.329 4 C -0.281 4.281 5 C 0.142 3.858 6 N -0.731 5.731 7 C 0.137 3.863 8 C 0.513 3.487 9 O -0.515 6.515 10 N -0.698 5.698 11 C 0.200 3.800 12 C -0.066 4.066 13 C -0.096 4.096 14 C -0.117 4.117 15 C -0.121 4.121 16 C -0.118 4.118 17 C -0.114 4.114 18 C -0.125 4.125 19 C 0.080 3.920 20 H 0.075 0.925 21 O -0.549 6.549 22 C -0.173 4.173 23 C -0.126 4.126 24 C -0.053 4.053 25 H 0.376 0.624 26 H 0.102 0.898 27 H -0.258 1.258 28 H -0.262 1.262 29 H 0.131 0.869 30 H 0.408 0.592 31 H 0.089 0.911 32 H 0.407 0.593 33 H 0.112 0.888 34 H 0.120 0.880 35 H 0.121 0.879 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.112 0.888 39 H 0.087 0.913 40 H 0.384 0.616 41 H 0.079 0.921 42 H 0.103 0.897 43 H 0.077 0.923 44 H 0.076 0.924 45 H 0.063 0.937 46 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.304 -2.338 -2.843 4.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.155 4.155 3 Si 0.575 3.425 4 C -0.292 4.292 5 C 0.021 3.979 6 N -0.364 5.364 7 C 0.028 3.972 8 C 0.298 3.702 9 O -0.389 6.389 10 N -0.350 5.350 11 C 0.113 3.887 12 C -0.067 4.067 13 C -0.114 4.114 14 C -0.135 4.135 15 C -0.139 4.139 16 C -0.136 4.136 17 C -0.132 4.132 18 C -0.163 4.163 19 C 0.020 3.980 20 H 0.093 0.907 21 O -0.355 6.355 22 C -0.211 4.211 23 C -0.164 4.164 24 C -0.090 4.090 25 H 0.223 0.777 26 H 0.120 0.880 27 H -0.183 1.183 28 H -0.188 1.188 29 H 0.148 0.852 30 H 0.245 0.755 31 H 0.106 0.894 32 H 0.243 0.757 33 H 0.130 0.870 34 H 0.138 0.862 35 H 0.139 0.861 36 H 0.140 0.860 37 H 0.140 0.860 38 H 0.131 0.869 39 H 0.105 0.895 40 H 0.232 0.768 41 H 0.098 0.902 42 H 0.121 0.879 43 H 0.096 0.904 44 H 0.095 0.905 45 H 0.081 0.919 46 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 2.187 -1.855 -2.384 3.729 hybrid contribution 0.865 -0.317 0.175 0.938 sum 3.053 -2.172 -2.209 4.349 Atomic orbital electron populations 1.86461 1.17904 1.81634 1.49100 1.24661 0.84725 1.08275 0.97802 0.95089 0.80672 0.79328 0.87406 1.20942 1.08279 0.98690 1.01243 1.20337 0.94061 0.96285 0.87212 1.44245 1.68102 1.04532 1.19485 1.20981 0.99480 0.83903 0.92838 1.20543 0.76462 0.82367 0.90848 1.90769 1.48697 1.49547 1.49846 1.45508 1.69709 1.11602 1.08164 1.19830 0.91884 0.95931 0.81055 1.19542 0.93660 0.99854 0.93637 1.20803 0.92229 0.99200 0.99183 1.21119 0.99010 0.99600 0.93809 1.21165 0.96935 1.00058 0.95712 1.21104 0.92859 0.99944 0.99674 1.20926 0.99143 1.00339 0.92806 1.23429 0.93708 0.94993 1.04142 1.22703 0.95868 0.95702 0.83699 0.90738 1.86402 1.40135 1.84450 1.24523 1.24191 0.95498 0.98941 1.02496 1.21868 0.95130 1.01337 0.98103 1.19924 1.02239 0.92677 0.94187 0.77714 0.88011 1.18287 1.18758 0.85176 0.75488 0.89385 0.75680 0.86986 0.86241 0.86136 0.86006 0.86033 0.86945 0.89468 0.76788 0.90224 0.87885 0.90426 0.90524 0.91874 0.90139 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.67 12.54 -35.23 -0.44 -1.11 16 2 C -0.04 -0.03 2.83 36.01 0.10 0.08 16 3 Si 0.67 -0.11 29.68 -169.99 -5.05 -5.16 16 4 C -0.28 -0.11 5.45 -101.34 -0.55 -0.66 16 5 C 0.14 0.00 9.63 -16.08 -0.15 -0.15 16 6 N -0.73 -0.25 5.46 -55.34 -0.30 -0.55 16 7 C 0.14 -0.05 3.36 -68.52 -0.23 -0.28 16 8 C 0.51 0.44 5.92 -10.98 -0.07 0.38 16 9 O -0.51 -2.20 14.41 5.56 0.08 -2.12 16 10 N -0.70 0.59 4.05 -47.92 -0.19 0.40 16 11 C 0.20 -0.08 0.95 -132.16 -0.13 -0.21 16 12 C -0.07 -0.10 4.07 -104.62 -0.43 -0.52 16 13 C -0.10 -0.21 8.20 -39.58 -0.32 -0.53 16 14 C -0.12 -0.24 10.05 -39.58 -0.40 -0.64 16 15 C -0.12 -0.20 10.05 -39.58 -0.40 -0.60 16 16 C -0.12 -0.16 10.05 -39.59 -0.40 -0.56 16 17 C -0.11 -0.14 9.25 -39.59 -0.37 -0.50 16 18 C -0.13 0.25 7.16 -25.92 -0.19 0.06 16 19 C 0.08 -0.18 5.27 -25.92 -0.14 -0.32 16 20 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 21 O -0.55 1.06 13.09 -35.23 -0.46 0.60 16 22 C -0.17 0.17 6.98 -25.92 -0.18 -0.01 16 23 C -0.13 0.09 5.47 -26.43 -0.14 -0.06 16 24 C -0.05 0.00 5.83 -28.11 -0.16 -0.17 16 25 H 0.38 -0.90 8.70 45.56 0.40 -0.50 16 26 H 0.10 0.14 7.96 -51.92 -0.41 -0.28 16 27 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 28 H -0.26 -0.53 7.10 56.52 0.40 -0.13 16 29 H 0.13 -0.18 4.36 -52.49 -0.23 -0.41 16 30 H 0.41 0.22 8.12 -40.82 -0.33 -0.11 16 31 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 32 H 0.41 -0.95 8.62 -40.82 -0.35 -1.30 16 33 H 0.11 0.17 7.08 -52.48 -0.37 -0.20 16 34 H 0.12 0.07 8.06 -52.49 -0.42 -0.36 16 35 H 0.12 0.00 8.06 -52.49 -0.42 -0.43 16 36 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 37 H 0.12 -0.09 5.92 -52.49 -0.31 -0.40 16 38 H 0.11 -0.31 8.09 -51.93 -0.42 -0.73 16 39 H 0.09 -0.17 8.10 -51.93 -0.42 -0.60 16 40 H 0.38 -1.90 9.12 45.56 0.42 -1.49 16 41 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 42 H 0.10 -0.17 5.77 -51.93 -0.30 -0.47 16 43 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 44 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 45 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 46 H 0.08 0.05 7.82 -51.93 -0.41 -0.35 16 LS Contribution 366.65 15.07 5.53 5.53 Total: 0.00 -8.00 366.65 -10.73 -18.74 By element: Atomic # 1 Polarization: -5.89 SS G_CDS: -5.75 Total: -11.64 kcal Atomic # 6 Polarization: -0.54 SS G_CDS: -4.15 Total: -4.69 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.50 Total: -0.15 kcal Atomic # 8 Polarization: -1.81 SS G_CDS: -0.82 Total: -2.63 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: -5.05 Total: -5.16 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -8.00 -10.73 -18.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_15413834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.689 kcal (2) G-P(sol) polarization free energy of solvation -8.002 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.691 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.424 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds