Wall clock time and date at job start Sat Mar 6 2021 23:50:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.47456 * 2 1 4 4 C 1.50703 * 109.46686 * 240.00308 * 2 1 3 5 5 C 1.38710 * 120.02962 * 285.02445 * 4 2 1 6 6 O 1.35902 * 120.05308 * 359.95574 * 5 4 2 7 7 C 1.42906 * 117.00034 * 180.02562 * 6 5 4 8 8 C 1.50696 * 109.47045 * 179.97438 * 7 6 5 9 9 O 1.21282 * 120.00223 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99881 * 180.02562 * 8 7 6 11 11 C 1.46504 * 120.00098 * 175.26940 * 10 8 7 12 12 C 1.50707 * 112.84773 * 72.63121 * 11 10 8 13 13 C 1.38233 * 119.99853 * 192.97556 * 12 11 10 14 14 C 1.38230 * 119.99998 * 179.76724 * 13 12 11 15 15 C 1.38234 * 119.99833 * 0.50959 * 14 13 12 16 16 C 1.38234 * 120.00147 * 359.73987 * 15 14 13 17 17 C 1.38234 * 120.00037 * 0.02562 * 16 15 14 18 18 C 1.53776 * 113.61347 * 301.43694 * 11 10 8 19 19 C 1.53775 * 87.08014 * 270.88396 * 18 11 10 20 20 H 1.09003 * 113.61329 * 220.01905 * 19 18 11 21 21 O 1.42894 * 113.61625 * 89.20174 * 19 18 11 22 22 C 1.53774 * 113.61500 * 203.93689 * 11 10 8 23 23 C 1.38752 * 119.89253 * 179.97438 * 5 4 2 24 24 C 1.38127 * 119.94269 * 0.02562 * 23 5 4 25 25 C 1.38285 * 120.05428 * 359.97438 * 24 23 5 26 26 C 1.38163 * 120.03018 * 105.00192 * 4 2 1 27 27 H 0.96697 * 113.99898 * 59.99041 * 1 2 3 28 28 H 1.08999 * 109.47185 * 120.00932 * 2 1 3 29 29 H 1.48500 * 109.99929 * 298.68458 * 3 2 1 30 30 H 1.48504 * 109.99601 * 60.00341 * 3 2 1 31 31 H 1.08994 * 109.47246 * 300.00174 * 7 6 5 32 32 H 1.09000 * 109.46779 * 60.00006 * 7 6 5 33 33 H 0.96996 * 119.99827 * 355.26527 * 10 8 7 34 34 H 1.08003 * 119.99600 * 359.97438 * 13 12 11 35 35 H 1.07996 * 120.00576 * 180.22500 * 14 13 12 36 36 H 1.08004 * 120.00103 * 179.72427 * 15 14 13 37 37 H 1.08003 * 120.00184 * 179.97438 * 16 15 14 38 38 H 1.07996 * 120.00423 * 179.97438 * 17 16 15 39 39 H 1.09000 * 113.61747 * 25.43124 * 18 11 10 40 40 H 1.09001 * 113.61547 * 156.24832 * 18 11 10 41 41 H 0.96710 * 114.00260 * 179.97438 * 21 19 18 42 42 H 1.08998 * 113.61294 * 203.66483 * 22 11 10 43 43 H 1.09004 * 113.61701 * 334.56876 * 22 11 10 44 44 H 1.07999 * 120.02836 * 180.02562 * 23 5 4 45 45 H 1.07993 * 119.97045 * 179.97438 * 24 23 5 46 46 H 1.08001 * 119.94582 * 180.28039 * 25 24 23 47 47 H 1.08007 * 119.97295 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.8691 -2.0940 -1.3074 6 8 1.3561 -2.8107 -0.2729 7 6 1.3239 -4.2317 -0.4210 8 6 0.7276 -4.8522 0.8160 9 8 0.3662 -4.1472 1.7343 10 7 0.5968 -6.1909 0.9023 11 6 0.1141 -6.8013 2.1436 12 6 -1.3583 -6.5757 2.3726 13 6 -1.9149 -6.8464 3.6087 14 6 -3.2644 -6.6350 3.8202 15 6 -4.0594 -6.1629 2.7926 16 6 -3.5038 -5.8971 1.5551 17 6 -2.1533 -6.1039 1.3449 18 6 0.9850 -6.4767 3.3688 19 6 1.8109 -7.7243 3.0138 20 1 2.1158 -8.3078 3.8826 21 8 2.8910 -7.4595 2.1165 22 6 0.5497 -8.2654 2.3200 23 6 2.3318 -2.7450 -2.4419 24 6 2.8536 -2.0144 -3.4916 25 6 2.9145 -0.6351 -3.4126 26 6 2.4536 0.0159 -2.2834 27 1 -0.3933 0.4418 -0.7650 28 1 1.7924 -0.5140 0.8899 29 1 1.5880 2.4585 -1.2242 30 1 1.5616 2.4678 1.2086 31 1 0.7169 -4.4929 -1.2878 32 1 2.3381 -4.6053 -0.5618 33 1 0.8222 -6.7502 0.1425 34 1 -1.2946 -7.2199 4.4101 35 1 -3.6987 -6.8430 4.7869 36 1 -5.1147 -6.0019 2.9566 37 1 -4.1250 -5.5286 0.7521 38 1 -1.7193 -5.8966 0.3780 39 1 1.5408 -5.5438 3.2747 40 1 0.4530 -6.5587 4.3166 41 1 3.4146 -8.2404 1.8898 42 1 -0.1008 -8.8378 2.9813 43 1 0.7542 -8.7766 1.3793 44 1 2.2841 -3.8222 -2.5042 45 1 3.2142 -2.5207 -4.3746 46 1 3.3186 -0.0653 -4.2362 47 1 2.5016 1.0933 -2.2245 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_2989392.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:50:55 Heat of formation + Delta-G solvation = -45.954669 kcal Electronic energy + Delta-G solvation = -32120.984717 eV Core-core repulsion = 27816.530597 eV Total energy + Delta-G solvation = -4304.454121 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.15829 -41.35540 -39.75611 -39.23146 -38.28386 -37.42613 -36.24847 -34.12714 -32.70339 -31.78495 -31.59904 -31.18614 -29.31940 -27.05197 -26.57943 -25.71112 -23.73835 -23.34671 -22.59323 -22.42906 -21.59647 -20.28461 -19.40763 -18.73434 -18.41427 -17.89920 -17.78657 -17.31315 -16.95324 -16.85137 -16.48363 -16.38129 -15.88360 -15.60951 -15.57081 -15.42354 -15.14665 -14.96572 -14.93849 -14.55434 -14.30349 -14.07639 -13.99694 -13.64072 -13.55981 -13.42730 -13.26498 -13.00033 -12.94501 -12.45917 -12.40157 -12.19669 -12.11203 -11.87388 -11.79381 -11.52718 -11.46545 -11.07661 -10.67528 -10.35735 -10.05233 -9.97464 -9.73983 -9.50667 -9.17300 -4.86197 0.23803 0.43954 0.48359 0.58095 1.41134 1.47880 1.64904 1.66122 2.07100 2.57845 2.70537 2.83813 2.98286 3.34566 3.51150 3.55030 3.58281 3.65564 3.73906 3.81304 3.83739 3.91416 3.99560 4.05210 4.10057 4.15067 4.24110 4.29147 4.30818 4.36533 4.53655 4.54949 4.58906 4.64918 4.70342 4.74660 4.77702 4.91937 5.01394 5.06607 5.11926 5.17928 5.29008 5.34424 5.42052 5.50584 5.62683 5.69926 5.71664 5.79895 6.15054 6.30554 6.47626 6.55724 6.63730 7.25011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.146 4.146 5 C 0.153 3.847 6 O -0.276 6.276 7 C 0.040 3.960 8 C 0.520 3.480 9 O -0.496 6.496 10 N -0.699 5.699 11 C 0.202 3.798 12 C -0.075 4.075 13 C -0.113 4.113 14 C -0.117 4.117 15 C -0.121 4.121 16 C -0.118 4.118 17 C -0.101 4.101 18 C -0.130 4.130 19 C 0.080 3.920 20 H 0.075 0.925 21 O -0.546 6.546 22 C -0.161 4.161 23 C -0.212 4.212 24 C -0.072 4.072 25 C -0.152 4.152 26 C -0.084 4.084 27 H 0.369 0.631 28 H 0.118 0.882 29 H -0.260 1.260 30 H -0.257 1.257 31 H 0.090 0.910 32 H 0.095 0.905 33 H 0.403 0.597 34 H 0.123 0.877 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.120 0.880 38 H 0.114 0.886 39 H 0.090 0.910 40 H 0.107 0.893 41 H 0.381 0.619 42 H 0.107 0.893 43 H 0.082 0.918 44 H 0.129 0.871 45 H 0.128 0.872 46 H 0.128 0.872 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.507 -5.701 -3.444 7.527 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.175 4.175 3 Si 0.590 3.410 4 C -0.147 4.147 5 C 0.107 3.893 6 O -0.188 6.188 7 C -0.039 4.039 8 C 0.304 3.696 9 O -0.368 6.368 10 N -0.353 5.353 11 C 0.115 3.885 12 C -0.076 4.076 13 C -0.132 4.132 14 C -0.135 4.135 15 C -0.139 4.139 16 C -0.136 4.136 17 C -0.120 4.120 18 C -0.168 4.168 19 C 0.020 3.980 20 H 0.093 0.907 21 O -0.351 6.351 22 C -0.200 4.200 23 C -0.231 4.231 24 C -0.091 4.091 25 C -0.170 4.170 26 C -0.101 4.101 27 H 0.216 0.784 28 H 0.136 0.864 29 H -0.186 1.186 30 H -0.182 1.182 31 H 0.107 0.893 32 H 0.113 0.887 33 H 0.238 0.762 34 H 0.140 0.860 35 H 0.141 0.859 36 H 0.140 0.860 37 H 0.138 0.862 38 H 0.132 0.868 39 H 0.109 0.891 40 H 0.125 0.875 41 H 0.228 0.772 42 H 0.125 0.875 43 H 0.101 0.899 44 H 0.147 0.853 45 H 0.146 0.854 46 H 0.146 0.854 47 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.830 -3.953 -1.966 5.244 hybrid contribution -0.761 -1.284 -1.324 1.995 sum 2.068 -5.238 -3.290 6.522 Atomic orbital electron populations 1.86713 1.17576 1.79583 1.48606 1.24901 0.83997 1.10291 0.98272 0.95131 0.91448 0.74505 0.79899 1.19636 1.05650 0.91004 0.98416 1.18801 0.92946 0.90831 0.86702 1.86239 1.77309 1.16854 1.38401 1.22454 1.02543 0.81333 0.97535 1.19897 0.79018 0.82255 0.88436 1.90810 1.46174 1.60821 1.39021 1.45248 1.68379 1.06149 1.15507 1.19802 0.89422 0.93764 0.85494 1.19758 0.94040 0.99615 0.94216 1.20889 0.95272 1.00860 0.96137 1.21124 0.93767 0.99451 0.99138 1.21186 0.99999 0.99347 0.93349 1.21154 0.95132 0.99796 0.97473 1.20860 0.93606 0.98797 0.98696 1.23499 0.96496 0.99300 0.97511 1.22725 0.86107 0.97217 0.91922 0.90741 1.86509 1.44103 1.37944 1.66534 1.24039 0.98765 0.94388 1.02759 1.21295 1.06483 1.00429 0.94888 1.21019 0.96277 0.94093 0.97662 1.21053 1.02844 0.94562 0.98555 1.21040 0.96598 0.99907 0.92583 0.78431 0.86442 1.18559 1.18206 0.89262 0.88724 0.76185 0.85960 0.85853 0.86037 0.86159 0.86834 0.89111 0.87483 0.77194 0.87498 0.89901 0.85313 0.85406 0.85358 0.84807 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.46 12.88 -35.23 -0.45 -2.92 16 2 C -0.06 -0.19 2.38 36.01 0.09 -0.11 16 3 Si 0.69 0.58 30.25 -169.99 -5.14 -4.56 16 4 C -0.15 -0.35 5.27 -104.47 -0.55 -0.90 16 5 C 0.15 0.43 6.66 -39.22 -0.26 0.17 16 6 O -0.28 -1.17 9.00 -39.34 -0.35 -1.52 16 7 C 0.04 0.02 5.22 36.00 0.19 0.21 16 8 C 0.52 1.46 6.58 -10.99 -0.07 1.39 16 9 O -0.50 -3.78 14.97 -14.35 -0.21 -3.99 16 10 N -0.70 0.11 3.65 -47.92 -0.17 -0.06 16 11 C 0.20 0.09 0.94 -132.16 -0.12 -0.04 16 12 C -0.07 -0.16 4.86 -104.62 -0.51 -0.67 16 13 C -0.11 -0.18 8.70 -39.59 -0.34 -0.53 16 14 C -0.12 -0.20 10.05 -39.59 -0.40 -0.60 16 15 C -0.12 -0.26 10.05 -39.58 -0.40 -0.66 16 16 C -0.12 -0.31 10.05 -39.58 -0.40 -0.71 16 17 C -0.10 -0.29 9.05 -39.58 -0.36 -0.65 16 18 C -0.13 -0.14 6.55 -25.92 -0.17 -0.31 16 19 C 0.08 -0.12 5.27 -25.92 -0.14 -0.26 16 20 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 21 O -0.55 0.66 13.09 -35.23 -0.46 0.20 16 22 C -0.16 0.36 7.14 -25.92 -0.19 0.18 16 23 C -0.21 -0.11 9.04 -39.43 -0.36 -0.47 16 24 C -0.07 0.02 10.04 -39.60 -0.40 -0.38 16 25 C -0.15 0.01 10.04 -39.56 -0.40 -0.39 16 26 C -0.08 -0.06 8.66 -39.61 -0.34 -0.40 16 27 H 0.37 0.45 8.70 45.56 0.40 0.85 16 28 H 0.12 0.47 7.83 -51.93 -0.41 0.07 16 29 H -0.26 -0.47 6.68 56.52 0.38 -0.09 16 30 H -0.26 -1.09 7.11 56.52 0.40 -0.69 16 31 H 0.09 -0.17 7.66 -51.93 -0.40 -0.56 16 32 H 0.09 -0.16 7.66 -51.93 -0.40 -0.55 16 33 H 0.40 -1.24 8.72 -40.82 -0.36 -1.59 16 34 H 0.12 -0.07 6.56 -52.48 -0.34 -0.41 16 35 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 36 H 0.12 0.05 8.06 -52.48 -0.42 -0.38 16 37 H 0.12 0.14 8.06 -52.48 -0.42 -0.28 16 38 H 0.11 0.24 6.86 -52.49 -0.36 -0.12 16 39 H 0.09 0.39 6.94 -51.93 -0.36 0.03 16 40 H 0.11 0.00 6.23 -51.93 -0.32 -0.32 16 41 H 0.38 -2.01 9.12 45.56 0.42 -1.59 16 42 H 0.11 -0.30 7.79 -51.93 -0.40 -0.71 16 43 H 0.08 -0.27 8.11 -51.93 -0.42 -0.69 16 44 H 0.13 -0.24 6.30 -52.49 -0.33 -0.57 16 45 H 0.13 -0.31 8.06 -52.49 -0.42 -0.73 16 46 H 0.13 -0.26 8.06 -52.49 -0.42 -0.68 16 47 H 0.13 -0.10 4.86 -52.48 -0.26 -0.35 16 LS Contribution 385.94 15.07 5.82 5.82 Total: 0.00 -11.22 385.94 -11.41 -22.64 By element: Atomic # 1 Polarization: -5.17 SS G_CDS: -5.30 Total: -10.47 kcal Atomic # 6 Polarization: -0.01 SS G_CDS: -5.12 Total: -5.13 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.17 Total: -0.06 kcal Atomic # 8 Polarization: -6.75 SS G_CDS: -1.48 Total: -8.23 kcal Atomic # 14 Polarization: 0.58 SS G_CDS: -5.14 Total: -4.56 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -11.22 -11.41 -22.64 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_2989392.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.317 kcal (2) G-P(sol) polarization free energy of solvation -11.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.542 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.413 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.638 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds