Wall clock time and date at job start Sat Mar 6 2021 23:50:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.47456 * 2 1 4 4 C 1.50703 * 109.46686 * 240.00308 * 2 1 3 5 5 C 1.38710 * 120.02962 * 285.02445 * 4 2 1 6 6 O 1.35902 * 120.05308 * 359.95574 * 5 4 2 7 7 C 1.42906 * 117.00034 * 180.02562 * 6 5 4 8 8 C 1.50696 * 109.47045 * 179.97438 * 7 6 5 9 9 O 1.21282 * 120.00223 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99881 * 180.02562 * 8 7 6 11 11 C 1.46504 * 120.00098 * 175.26940 * 10 8 7 12 12 C 1.50707 * 112.84773 * 72.63121 * 11 10 8 13 13 C 1.38233 * 119.99853 * 192.97556 * 12 11 10 14 14 C 1.38230 * 119.99998 * 179.76724 * 13 12 11 15 15 C 1.38234 * 119.99833 * 0.50959 * 14 13 12 16 16 C 1.38234 * 120.00147 * 359.73987 * 15 14 13 17 17 C 1.38234 * 120.00037 * 0.02562 * 16 15 14 18 18 C 1.53776 * 113.61347 * 301.43694 * 11 10 8 19 19 C 1.53775 * 87.08014 * 270.88396 * 18 11 10 20 20 H 1.09003 * 113.61329 * 220.01905 * 19 18 11 21 21 O 1.42894 * 113.61625 * 89.20174 * 19 18 11 22 22 C 1.53774 * 113.61500 * 203.93689 * 11 10 8 23 23 C 1.38752 * 119.89253 * 179.97438 * 5 4 2 24 24 C 1.38127 * 119.94269 * 0.02562 * 23 5 4 25 25 C 1.38285 * 120.05428 * 359.97438 * 24 23 5 26 26 C 1.38163 * 120.03018 * 105.00192 * 4 2 1 27 27 H 0.96697 * 113.99898 * 59.99041 * 1 2 3 28 28 H 1.08999 * 109.47185 * 120.00932 * 2 1 3 29 29 H 1.48500 * 109.99929 * 298.68458 * 3 2 1 30 30 H 1.48504 * 109.99601 * 60.00341 * 3 2 1 31 31 H 1.08994 * 109.47246 * 300.00174 * 7 6 5 32 32 H 1.09000 * 109.46779 * 60.00006 * 7 6 5 33 33 H 0.96996 * 119.99827 * 355.26527 * 10 8 7 34 34 H 1.08003 * 119.99600 * 359.97438 * 13 12 11 35 35 H 1.07996 * 120.00576 * 180.22500 * 14 13 12 36 36 H 1.08004 * 120.00103 * 179.72427 * 15 14 13 37 37 H 1.08003 * 120.00184 * 179.97438 * 16 15 14 38 38 H 1.07996 * 120.00423 * 179.97438 * 17 16 15 39 39 H 1.09000 * 113.61747 * 25.43124 * 18 11 10 40 40 H 1.09001 * 113.61547 * 156.24832 * 18 11 10 41 41 H 0.96710 * 114.00260 * 179.97438 * 21 19 18 42 42 H 1.08998 * 113.61294 * 203.66483 * 22 11 10 43 43 H 1.09004 * 113.61701 * 334.56876 * 22 11 10 44 44 H 1.07999 * 120.02836 * 180.02562 * 23 5 4 45 45 H 1.07993 * 119.97045 * 179.97438 * 24 23 5 46 46 H 1.08001 * 119.94582 * 180.28039 * 25 24 23 47 47 H 1.08007 * 119.97295 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.8691 -2.0940 -1.3074 6 8 1.3561 -2.8107 -0.2729 7 6 1.3239 -4.2317 -0.4210 8 6 0.7276 -4.8522 0.8160 9 8 0.3662 -4.1472 1.7343 10 7 0.5968 -6.1909 0.9023 11 6 0.1141 -6.8013 2.1436 12 6 -1.3583 -6.5757 2.3726 13 6 -1.9149 -6.8464 3.6087 14 6 -3.2644 -6.6350 3.8202 15 6 -4.0594 -6.1629 2.7926 16 6 -3.5038 -5.8971 1.5551 17 6 -2.1533 -6.1039 1.3449 18 6 0.9850 -6.4767 3.3688 19 6 1.8109 -7.7243 3.0138 20 1 2.1158 -8.3078 3.8826 21 8 2.8910 -7.4595 2.1165 22 6 0.5497 -8.2654 2.3200 23 6 2.3318 -2.7450 -2.4419 24 6 2.8536 -2.0144 -3.4916 25 6 2.9145 -0.6351 -3.4126 26 6 2.4536 0.0159 -2.2834 27 1 -0.3933 0.4418 -0.7650 28 1 1.7924 -0.5140 0.8899 29 1 1.5880 2.4585 -1.2242 30 1 1.5616 2.4678 1.2086 31 1 0.7169 -4.4929 -1.2878 32 1 2.3381 -4.6053 -0.5618 33 1 0.8222 -6.7502 0.1425 34 1 -1.2946 -7.2199 4.4101 35 1 -3.6987 -6.8430 4.7869 36 1 -5.1147 -6.0019 2.9566 37 1 -4.1250 -5.5286 0.7521 38 1 -1.7193 -5.8966 0.3780 39 1 1.5408 -5.5438 3.2747 40 1 0.4530 -6.5587 4.3166 41 1 3.4146 -8.2404 1.8898 42 1 -0.1008 -8.8378 2.9813 43 1 0.7542 -8.7766 1.3793 44 1 2.2841 -3.8222 -2.5042 45 1 3.2142 -2.5207 -4.3746 46 1 3.3186 -0.0653 -4.2362 47 1 2.5016 1.0933 -2.2245 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_2989392.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:50:54 Heat of formation + Delta-G solvation = -48.362420 kcal Electronic energy + Delta-G solvation = -32121.089125 eV Core-core repulsion = 27816.530597 eV Total energy + Delta-G solvation = -4304.558529 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -42.21301 -41.41307 -39.91106 -39.26720 -38.43593 -37.62705 -36.22660 -34.23419 -32.76823 -31.89049 -31.69118 -31.21075 -29.38615 -27.00221 -26.71332 -25.72721 -23.80369 -23.44017 -22.66446 -22.48123 -21.66140 -20.33587 -19.49999 -18.71726 -18.50808 -18.07901 -17.76728 -17.40947 -17.02267 -16.93016 -16.55378 -16.43309 -16.07352 -15.68078 -15.65125 -15.47918 -15.18124 -15.08652 -15.04413 -14.62831 -14.39457 -14.20401 -14.04773 -13.73080 -13.65470 -13.45970 -13.22791 -13.07065 -12.98897 -12.54641 -12.34431 -12.26765 -12.14336 -11.97369 -11.89349 -11.69960 -11.48264 -10.97676 -10.89251 -10.55438 -10.13211 -9.98945 -9.88580 -9.62296 -9.22778 -4.97426 0.22382 0.35637 0.41092 0.43261 1.26664 1.42117 1.49490 1.52160 1.91406 2.54938 2.68962 2.74062 3.11108 3.39875 3.43108 3.51035 3.60850 3.66499 3.69915 3.81282 3.85835 3.93095 4.01752 4.03617 4.06075 4.12158 4.19246 4.30525 4.34764 4.36281 4.52410 4.55893 4.58520 4.65333 4.66357 4.80707 4.84740 4.94743 4.95913 4.97078 5.01710 5.09479 5.27848 5.35412 5.36641 5.50071 5.51912 5.55932 5.68388 5.75979 6.03932 6.27039 6.46075 6.50660 6.91596 7.15421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.084 4.084 3 Si 0.784 3.216 4 C -0.164 4.164 5 C 0.128 3.872 6 O -0.312 6.312 7 C 0.039 3.961 8 C 0.516 3.484 9 O -0.555 6.555 10 N -0.682 5.682 11 C 0.192 3.808 12 C -0.084 4.084 13 C -0.123 4.123 14 C -0.126 4.126 15 C -0.135 4.135 16 C -0.135 4.135 17 C -0.121 4.121 18 C -0.142 4.142 19 C 0.090 3.910 20 H 0.093 0.907 21 O -0.563 6.563 22 C -0.144 4.144 23 C -0.213 4.213 24 C -0.074 4.074 25 C -0.153 4.153 26 C -0.088 4.088 27 H 0.381 0.619 28 H 0.093 0.907 29 H -0.262 1.262 30 H -0.308 1.308 31 H 0.115 0.885 32 H 0.119 0.881 33 H 0.419 0.581 34 H 0.142 0.858 35 H 0.142 0.858 36 H 0.135 0.865 37 H 0.128 0.872 38 H 0.114 0.886 39 H 0.051 0.949 40 H 0.112 0.888 41 H 0.399 0.601 42 H 0.118 0.882 43 H 0.100 0.900 44 H 0.151 0.849 45 H 0.154 0.846 46 H 0.152 0.848 47 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.702 -7.177 -5.212 10.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.192 4.192 3 Si 0.688 3.312 4 C -0.166 4.166 5 C 0.083 3.917 6 O -0.224 6.224 7 C -0.039 4.039 8 C 0.302 3.698 9 O -0.432 6.432 10 N -0.336 5.336 11 C 0.105 3.895 12 C -0.085 4.085 13 C -0.141 4.141 14 C -0.143 4.143 15 C -0.153 4.153 16 C -0.153 4.153 17 C -0.139 4.139 18 C -0.180 4.180 19 C 0.030 3.970 20 H 0.111 0.889 21 O -0.372 6.372 22 C -0.182 4.182 23 C -0.231 4.231 24 C -0.092 4.092 25 C -0.171 4.171 26 C -0.105 4.105 27 H 0.229 0.771 28 H 0.111 0.889 29 H -0.188 1.188 30 H -0.236 1.236 31 H 0.133 0.867 32 H 0.137 0.863 33 H 0.257 0.743 34 H 0.160 0.840 35 H 0.160 0.840 36 H 0.153 0.847 37 H 0.146 0.854 38 H 0.132 0.868 39 H 0.070 0.930 40 H 0.130 0.870 41 H 0.250 0.750 42 H 0.136 0.864 43 H 0.119 0.881 44 H 0.169 0.831 45 H 0.172 0.828 46 H 0.170 0.830 47 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 4.048 -5.511 -3.794 7.820 hybrid contribution -1.141 -0.856 -0.752 1.612 sum 2.907 -6.367 -4.546 8.346 Atomic orbital electron populations 1.86657 1.19028 1.80371 1.49627 1.25246 0.83241 1.12623 0.98057 0.94032 0.89812 0.70670 0.76696 1.19714 1.06802 0.91381 0.98656 1.19104 0.94122 0.91173 0.87348 1.86194 1.77991 1.18524 1.39727 1.22640 1.04140 0.80019 0.97070 1.20390 0.78192 0.82827 0.88408 1.90779 1.48977 1.62268 1.41158 1.45135 1.66984 1.05438 1.16000 1.19998 0.88374 0.95767 0.85357 1.20036 0.94965 0.99178 0.94314 1.21192 0.95634 1.00744 0.96506 1.21449 0.93995 0.99029 0.99869 1.21449 1.00944 0.99545 0.93355 1.21384 0.95431 1.00253 0.98210 1.21022 0.94035 0.99658 0.99222 1.23570 0.97362 0.98817 0.98275 1.22644 0.86280 0.95430 0.92613 0.88902 1.86468 1.44455 1.39656 1.66604 1.23988 0.97973 0.92483 1.03716 1.21578 1.05714 1.01710 0.94127 1.21398 0.95394 0.94239 0.98135 1.21408 1.01987 0.95039 0.98683 1.21198 0.96407 1.00525 0.92398 0.77073 0.88909 1.18772 1.23618 0.86695 0.86340 0.74332 0.84032 0.83999 0.84663 0.85430 0.86814 0.93015 0.86973 0.75045 0.86395 0.88128 0.83097 0.82794 0.83032 0.83537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -6.90 12.88 -148.98 -1.92 -8.82 16 2 C -0.08 -0.72 2.38 71.24 0.17 -0.55 16 3 Si 0.78 2.17 30.25 68.60 2.08 4.24 16 4 C -0.16 -1.01 5.27 -19.77 -0.10 -1.11 16 5 C 0.13 0.86 6.66 22.51 0.15 1.01 16 6 O -0.31 -3.37 9.00 -73.41 -0.66 -4.03 16 7 C 0.04 0.09 5.22 71.23 0.37 0.46 16 8 C 0.52 3.93 6.58 87.66 0.58 4.51 16 9 O -0.56 -10.52 14.97 16.00 0.24 -10.28 16 10 N -0.68 -0.29 3.65 -423.92 -1.55 -1.83 16 11 C 0.19 0.29 0.94 3.38 0.00 0.30 16 12 C -0.08 -0.47 4.86 -19.86 -0.10 -0.56 16 13 C -0.12 -0.48 8.70 22.27 0.19 -0.29 16 14 C -0.13 -0.52 10.05 22.27 0.22 -0.29 16 15 C -0.14 -0.74 10.05 22.27 0.22 -0.51 16 16 C -0.13 -0.95 10.05 22.27 0.22 -0.73 16 17 C -0.12 -0.91 9.05 22.27 0.20 -0.71 16 18 C -0.14 -0.50 6.55 31.12 0.20 -0.29 16 19 C 0.09 -0.33 5.27 31.12 0.16 -0.16 16 20 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 21 O -0.56 1.75 13.09 -148.98 -1.95 -0.20 16 22 C -0.14 0.81 7.14 31.12 0.22 1.03 16 23 C -0.21 -0.07 9.04 22.37 0.20 0.13 16 24 C -0.07 0.17 10.04 22.25 0.22 0.39 16 25 C -0.15 0.26 10.04 22.28 0.22 0.49 16 26 C -0.09 -0.09 8.66 22.25 0.19 0.10 16 27 H 0.38 1.86 8.70 -74.06 -0.64 1.21 16 28 H 0.09 1.15 7.83 -2.39 -0.02 1.13 16 29 H -0.26 -0.77 6.68 99.48 0.66 -0.10 16 30 H -0.31 -3.38 7.11 99.48 0.71 -2.67 16 31 H 0.12 -0.44 7.66 -2.39 -0.02 -0.46 16 32 H 0.12 -0.40 7.66 -2.39 -0.02 -0.42 16 33 H 0.42 -2.74 8.72 -92.71 -0.81 -3.55 16 34 H 0.14 -0.14 6.56 -2.91 -0.02 -0.16 16 35 H 0.14 -0.07 8.06 -2.91 -0.02 -0.10 16 36 H 0.14 0.21 8.06 -2.91 -0.02 0.19 16 37 H 0.13 0.53 8.06 -2.91 -0.02 0.51 16 38 H 0.11 0.69 6.86 -2.91 -0.02 0.67 16 39 H 0.05 0.61 6.94 -2.39 -0.02 0.59 16 40 H 0.11 0.15 6.23 -2.39 -0.01 0.13 16 41 H 0.40 -4.79 9.12 -74.05 -0.68 -5.47 16 42 H 0.12 -0.87 7.79 -2.39 -0.02 -0.89 16 43 H 0.10 -0.89 8.11 -2.38 -0.02 -0.91 16 44 H 0.15 -0.80 6.30 -2.91 -0.02 -0.82 16 45 H 0.15 -1.19 8.06 -2.91 -0.02 -1.22 16 46 H 0.15 -1.01 8.06 -2.91 -0.02 -1.03 16 47 H 0.15 -0.34 4.86 -2.91 -0.01 -0.35 16 Total: 0.00 -30.87 385.94 -1.28 -32.15 By element: Atomic # 1 Polarization: -13.32 SS G_CDS: -1.09 Total: -14.40 kcal Atomic # 6 Polarization: -0.38 SS G_CDS: 3.57 Total: 3.19 kcal Atomic # 7 Polarization: -0.29 SS G_CDS: -1.55 Total: -1.83 kcal Atomic # 8 Polarization: -19.05 SS G_CDS: -4.29 Total: -23.34 kcal Atomic # 14 Polarization: 2.17 SS G_CDS: 2.08 Total: 4.24 kcal Total: -30.87 -1.28 -32.15 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_2989392.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.216 kcal (2) G-P(sol) polarization free energy of solvation -30.866 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.082 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.146 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.362 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds