Wall clock time and date at job start Sat Mar 6 2021 23:50:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86297 * 109.46914 * 2 1 4 4 C 1.50700 * 109.47072 * 119.99922 * 2 1 3 5 5 C 1.38272 * 119.94232 * 65.00291 * 4 2 1 6 6 C 1.38137 * 120.05252 * 179.97438 * 5 4 2 7 7 C 1.38726 * 119.94809 * 0.02562 * 6 5 4 8 8 O 1.35907 * 120.05905 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99825 * 179.97438 * 8 7 6 10 10 C 1.50710 * 109.46686 * 180.02562 * 9 8 7 11 11 O 1.21273 * 119.99936 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99669 * 180.02562 * 10 9 8 13 13 C 1.46499 * 119.99793 * 185.24068 * 12 10 9 14 14 C 1.50699 * 112.85259 * 67.27814 * 13 12 10 15 15 C 1.38239 * 120.00174 * 191.02540 * 14 13 12 16 16 C 1.38228 * 119.99840 * 179.80843 * 15 14 13 17 17 C 1.38235 * 120.00297 * 0.40344 * 16 15 14 18 18 C 1.38237 * 119.99698 * 359.84967 * 17 16 15 19 19 C 1.38231 * 119.99730 * 11.29933 * 14 13 12 20 20 C 1.53787 * 113.61276 * 296.08059 * 13 12 10 21 21 C 1.53778 * 87.08299 * 270.88557 * 20 13 12 22 22 H 1.08996 * 113.61661 * 220.02129 * 21 20 13 23 23 O 1.42899 * 113.61707 * 89.11487 * 21 20 13 24 24 C 1.53779 * 87.08022 * 334.56682 * 21 20 13 25 25 C 1.38731 * 119.88852 * 0.27313 * 7 6 5 26 26 C 1.38142 * 119.94042 * 359.47151 * 25 7 6 27 27 H 0.96704 * 114.00307 * 59.99715 * 1 2 3 28 28 H 1.09001 * 109.46965 * 240.00057 * 2 1 3 29 29 H 1.48505 * 110.00061 * 60.00323 * 3 2 1 30 30 H 1.48500 * 110.00078 * 181.31843 * 3 2 1 31 31 H 1.07995 * 119.96964 * 359.97169 * 5 4 2 32 32 H 1.08003 * 120.02472 * 179.97438 * 6 5 4 33 33 H 1.08996 * 109.47234 * 60.00937 * 9 8 7 34 34 H 1.08996 * 109.47687 * 300.00223 * 9 8 7 35 35 H 0.97001 * 120.00324 * 5.23692 * 12 10 9 36 36 H 1.08006 * 119.99664 * 0.02562 * 15 14 13 37 37 H 1.08009 * 119.99744 * 180.23342 * 16 15 14 38 38 H 1.07999 * 119.99876 * 179.83460 * 17 16 15 39 39 H 1.08004 * 119.99621 * 179.97438 * 18 17 16 40 40 H 1.08003 * 120.00129 * 359.97438 * 19 14 13 41 41 H 1.09002 * 113.61357 * 156.33337 * 20 13 12 42 42 H 1.08999 * 113.68821 * 25.44717 * 20 13 12 43 43 H 0.96693 * 114.00385 * 179.97438 * 23 21 20 44 44 H 1.09008 * 113.61608 * 139.98212 * 24 21 20 45 45 H 1.09001 * 113.61648 * 270.88156 * 24 21 20 46 46 H 1.08005 * 120.03390 * 179.71950 * 25 7 6 47 47 H 1.08004 * 119.97457 * 180.22902 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6840 -2.0606 1.3972 6 6 2.1438 -2.7141 2.5239 7 6 2.8538 -2.0147 3.4889 8 8 3.3068 -2.6553 4.5986 9 6 4.0308 -1.8722 5.5497 10 6 4.4506 -2.7455 6.7040 11 8 4.1581 -3.9224 6.7115 12 7 5.1501 -2.2183 7.7282 13 6 5.6571 -3.0874 8.7931 14 6 6.7327 -4.0296 8.3172 15 6 7.1544 -5.0646 9.1307 16 6 8.1382 -5.9311 8.6926 17 6 8.7062 -5.7578 7.4443 18 6 8.2882 -4.7196 6.6329 19 6 7.3016 -3.8554 7.0695 20 6 4.5484 -3.7778 9.6049 21 6 4.5664 -2.5475 10.5274 22 1 4.4646 -2.7929 11.5845 23 8 3.6810 -1.5063 10.1103 24 6 6.0226 -2.3330 10.0823 25 6 3.0953 -0.6587 3.3223 26 6 2.6379 -0.0109 2.1912 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 1.5614 2.4679 1.2086 30 1 3.5345 1.7703 -0.0321 31 1 1.1308 -2.6045 0.6459 32 1 1.9500 -3.7686 2.6539 33 1 3.3950 -1.0662 5.9160 34 1 4.9156 -1.4493 5.0740 35 1 5.3180 -1.2635 7.7603 36 1 6.7128 -5.1982 10.1072 37 1 8.4651 -6.7421 9.3267 38 1 9.4768 -6.4333 7.1031 39 1 8.7323 -4.5839 5.6578 40 1 6.9749 -3.0443 6.4355 41 1 4.8732 -4.6957 10.0949 42 1 3.6144 -3.8985 9.0562 43 1 3.6876 -0.7300 10.6868 44 1 6.2793 -1.2864 9.9179 45 1 6.7504 -2.8558 10.7028 46 1 3.6439 -0.1109 4.0743 47 1 2.8287 1.0439 2.0592 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_2989410.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:50:58 Heat of formation + Delta-G solvation = -49.743956 kcal Electronic energy + Delta-G solvation = -31284.402127 eV Core-core repulsion = 26979.783691 eV Total energy + Delta-G solvation = -4304.618436 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -42.26092 -41.44977 -39.99310 -39.32733 -38.83164 -37.21035 -36.26152 -34.29390 -32.58442 -31.97967 -31.83078 -31.70106 -29.69328 -27.00967 -26.32720 -25.67004 -24.22731 -23.57701 -22.74169 -22.28785 -21.71199 -20.37843 -19.60260 -18.75753 -18.55950 -18.33598 -17.80580 -17.46920 -17.27242 -16.93226 -16.76736 -16.46300 -15.82961 -15.80844 -15.63898 -15.53072 -15.26783 -15.18411 -14.73688 -14.54418 -14.39266 -14.16360 -14.06619 -13.95621 -13.73890 -13.58124 -13.47993 -13.26479 -13.00912 -12.53777 -12.38258 -12.28695 -12.26488 -12.05764 -11.98714 -11.90272 -11.50701 -11.00463 -10.94943 -10.29029 -10.21549 -10.16871 -9.89490 -9.63658 -9.37602 -4.93179 0.08591 0.13828 0.34322 0.42235 1.31488 1.33743 1.39518 1.65166 1.96469 2.43855 2.47311 2.72880 3.08943 3.33039 3.41644 3.46705 3.55839 3.58931 3.65246 3.70385 3.79583 3.83072 3.93579 3.94572 4.01257 4.04998 4.11044 4.19231 4.27668 4.33174 4.38498 4.54856 4.56651 4.57294 4.63986 4.78150 4.78745 4.81532 4.93098 4.95196 5.00100 5.00395 5.05892 5.08248 5.32600 5.33455 5.48853 5.52673 5.55409 5.66809 6.02794 6.11104 6.38257 6.88403 6.92638 7.08220 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.078 4.078 3 Si 0.775 3.225 4 C -0.128 4.128 5 C -0.055 4.055 6 C -0.160 4.160 7 C 0.121 3.879 8 O -0.313 6.313 9 C 0.036 3.964 10 C 0.517 3.483 11 O -0.554 6.554 12 N -0.683 5.683 13 C 0.192 3.808 14 C -0.085 4.085 15 C -0.121 4.121 16 C -0.124 4.124 17 C -0.134 4.134 18 C -0.133 4.133 19 C -0.123 4.123 20 C -0.142 4.142 21 C 0.087 3.913 22 H 0.094 0.906 23 O -0.565 6.565 24 C -0.144 4.144 25 C -0.203 4.203 26 C -0.098 4.098 27 H 0.403 0.597 28 H 0.093 0.907 29 H -0.294 1.294 30 H -0.287 1.287 31 H 0.148 0.852 32 H 0.136 0.864 33 H 0.117 0.883 34 H 0.121 0.879 35 H 0.419 0.581 36 H 0.143 0.857 37 H 0.143 0.857 38 H 0.136 0.864 39 H 0.129 0.871 40 H 0.113 0.887 41 H 0.113 0.887 42 H 0.051 0.949 43 H 0.399 0.601 44 H 0.099 0.901 45 H 0.120 0.880 46 H 0.158 0.842 47 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.221 6.754 0.798 7.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.187 4.187 3 Si 0.681 3.319 4 C -0.129 4.129 5 C -0.073 4.073 6 C -0.179 4.179 7 C 0.076 3.924 8 O -0.226 6.226 9 C -0.042 4.042 10 C 0.303 3.697 11 O -0.430 6.430 12 N -0.336 5.336 13 C 0.105 3.895 14 C -0.086 4.086 15 C -0.139 4.139 16 C -0.142 4.142 17 C -0.152 4.152 18 C -0.151 4.151 19 C -0.142 4.142 20 C -0.180 4.180 21 C 0.028 3.972 22 H 0.111 0.889 23 O -0.374 6.374 24 C -0.182 4.182 25 C -0.221 4.221 26 C -0.115 4.115 27 H 0.254 0.746 28 H 0.110 0.890 29 H -0.222 1.222 30 H -0.214 1.214 31 H 0.166 0.834 32 H 0.154 0.846 33 H 0.135 0.865 34 H 0.138 0.862 35 H 0.257 0.743 36 H 0.160 0.840 37 H 0.161 0.839 38 H 0.154 0.846 39 H 0.147 0.853 40 H 0.131 0.869 41 H 0.131 0.869 42 H 0.070 0.930 43 H 0.249 0.751 44 H 0.118 0.882 45 H 0.138 0.862 46 H 0.175 0.825 47 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 3.429 5.583 1.331 6.686 hybrid contribution 0.246 0.143 0.482 0.560 sum 3.675 5.726 1.813 7.041 Atomic orbital electron populations 1.86450 1.17347 1.82421 1.51347 1.24816 0.85797 1.11155 0.96931 0.94331 0.77367 0.75412 0.84830 1.19682 1.01291 0.94738 0.97154 1.21026 0.96168 0.93660 0.96425 1.20724 1.01635 1.01386 0.94106 1.19186 0.94925 0.91494 0.86814 1.86137 1.69130 1.38001 1.29356 1.22709 0.99058 0.93829 0.88591 1.20306 0.77809 0.88059 0.83532 1.90761 1.54583 1.18476 1.79219 1.45161 1.54942 1.11670 1.21877 1.19999 0.91889 0.90847 0.86761 1.19991 0.96781 0.96910 0.94922 1.21179 0.97727 0.94443 1.00581 1.21457 0.96572 0.99609 0.96564 1.21463 1.00642 0.98199 0.94861 1.21385 0.97656 0.95702 1.00395 1.21029 0.97091 0.99951 0.96094 1.23587 0.98659 0.98160 0.97596 1.22683 0.88653 0.88120 0.97750 0.88856 1.86472 1.64106 1.30144 1.56647 1.24003 0.98445 1.02373 0.93374 1.21380 1.06554 0.93315 1.00845 1.20891 0.97863 0.99078 0.93673 0.74602 0.88962 1.22219 1.21425 0.83414 0.84582 0.86489 0.86176 0.74270 0.83975 0.83919 0.84564 0.85321 0.86880 0.86880 0.92974 0.75067 0.88223 0.86209 0.82490 0.85613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -0.36 12.81 -148.98 -1.91 -2.27 16 2 C -0.08 -0.02 2.79 71.24 0.20 0.18 16 3 Si 0.77 -1.65 29.85 68.60 2.05 0.40 16 4 C -0.13 -0.78 5.38 -19.85 -0.11 -0.89 16 5 C -0.05 -0.36 9.68 22.25 0.22 -0.14 16 6 C -0.16 -1.38 9.99 22.36 0.22 -1.16 16 7 C 0.12 1.04 6.69 22.50 0.15 1.19 16 8 O -0.31 -3.29 9.67 -73.47 -0.71 -4.00 16 9 C 0.04 0.08 5.22 71.24 0.37 0.45 16 10 C 0.52 3.65 6.17 87.66 0.54 4.19 16 11 O -0.55 -9.72 14.88 16.03 0.24 -9.48 16 12 N -0.68 -0.23 3.83 -423.92 -1.62 -1.85 16 13 C 0.19 0.22 0.94 3.39 0.00 0.23 16 14 C -0.08 -0.40 4.86 -19.87 -0.10 -0.50 16 15 C -0.12 -0.34 8.61 22.27 0.19 -0.15 16 16 C -0.12 -0.36 10.05 22.27 0.22 -0.13 16 17 C -0.13 -0.55 10.05 22.27 0.22 -0.33 16 18 C -0.13 -0.77 10.05 22.27 0.22 -0.55 16 19 C -0.12 -0.80 8.85 22.27 0.20 -0.60 16 20 C -0.14 -0.46 6.57 31.12 0.20 -0.25 16 21 C 0.09 -0.30 5.28 31.12 0.16 -0.14 16 22 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 23 O -0.57 1.36 13.09 -148.98 -1.95 -0.59 16 24 C -0.14 0.83 7.11 31.12 0.22 1.05 16 25 C -0.20 -0.96 9.04 22.37 0.20 -0.76 16 26 C -0.10 -0.58 8.66 22.25 0.19 -0.39 16 27 H 0.40 -4.07 8.74 -74.05 -0.65 -4.72 16 28 H 0.09 -0.35 7.96 -2.39 -0.02 -0.37 16 29 H -0.29 -1.44 7.05 99.48 0.70 -0.74 16 30 H -0.29 -0.85 7.11 99.48 0.71 -0.14 16 31 H 0.15 0.44 8.06 -2.91 -0.02 0.42 16 32 H 0.14 1.05 8.06 -2.91 -0.02 1.02 16 33 H 0.12 -0.33 7.65 -2.39 -0.02 -0.35 16 34 H 0.12 -0.48 7.68 -2.39 -0.02 -0.50 16 35 H 0.42 -2.64 8.67 -92.71 -0.80 -3.45 16 36 H 0.14 -0.30 6.67 -2.91 -0.02 -0.32 16 37 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 38 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 39 H 0.13 0.36 8.06 -2.91 -0.02 0.34 16 40 H 0.11 0.57 6.55 -2.91 -0.02 0.55 16 41 H 0.11 0.08 6.32 -2.39 -0.02 0.07 16 42 H 0.05 0.60 7.08 -2.39 -0.02 0.58 16 43 H 0.40 -4.49 9.12 -74.06 -0.68 -5.17 16 44 H 0.10 -0.87 8.10 -2.38 -0.02 -0.89 16 45 H 0.12 -0.93 7.72 -2.39 -0.02 -0.95 16 46 H 0.16 -0.30 6.30 -2.91 -0.02 -0.32 16 47 H 0.13 0.50 4.86 -2.91 -0.01 0.49 16 Total: 0.00 -30.46 386.11 -1.41 -31.87 By element: Atomic # 1 Polarization: -14.34 SS G_CDS: -1.05 Total: -15.39 kcal Atomic # 6 Polarization: -2.24 SS G_CDS: 3.55 Total: 1.31 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -1.62 Total: -1.85 kcal Atomic # 8 Polarization: -12.01 SS G_CDS: -4.33 Total: -16.34 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: 2.05 Total: 0.40 kcal Total: -30.46 -1.41 -31.87 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_2989410.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.872 kcal (2) G-P(sol) polarization free energy of solvation -30.461 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.411 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.871 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.744 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds