Wall clock time and date at job start Sat Mar 6 2021 23:51:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47119 * 2 1 4 4 C 1.50703 * 109.46938 * 120.00176 * 2 1 3 5 5 C 1.38261 * 119.94331 * 65.00083 * 4 2 1 6 6 C 1.38149 * 120.05569 * 179.97438 * 5 4 2 7 7 C 1.38735 * 119.94152 * 359.97438 * 6 5 4 8 8 O 1.35902 * 120.05565 * 180.02562 * 7 6 5 9 9 C 1.42893 * 117.00226 * 180.02562 * 8 7 6 10 10 C 1.52997 * 109.47244 * 179.97438 * 9 8 7 11 11 C 1.50705 * 109.47090 * 180.02562 * 10 9 8 12 12 O 1.21274 * 119.99806 * 359.97438 * 11 10 9 13 13 N 1.34778 * 119.99858 * 180.02562 * 11 10 9 14 14 C 1.46500 * 119.99890 * 185.03530 * 13 11 10 15 15 C 1.50702 * 112.84889 * 294.36762 * 14 13 11 16 16 C 1.38229 * 119.99924 * 167.42066 * 15 14 13 17 17 C 1.38237 * 119.99847 * 179.75959 * 16 15 14 18 18 C 1.38242 * 120.00106 * 0.48923 * 17 16 15 19 19 C 1.38236 * 119.99518 * 359.78818 * 18 17 16 20 20 C 1.38229 * 120.00150 * 359.95212 * 19 18 17 21 21 C 1.53778 * 113.69134 * 163.09546 * 14 13 11 22 22 C 1.53775 * 87.08484 * 270.87289 * 21 14 13 23 23 H 1.08998 * 113.62021 * 220.02256 * 22 21 14 24 24 O 1.42897 * 113.69125 * 89.12212 * 22 21 14 25 25 C 1.53785 * 87.08193 * 334.56760 * 22 21 14 26 26 C 1.38734 * 119.88911 * 0.27491 * 7 6 5 27 27 C 1.38148 * 119.94091 * 359.43041 * 26 7 6 28 28 H 0.96706 * 114.00059 * 299.99724 * 1 2 3 29 29 H 1.09001 * 109.46529 * 239.99875 * 2 1 3 30 30 H 1.48498 * 110.00194 * 300.00138 * 3 2 1 31 31 H 1.48502 * 109.99839 * 61.32505 * 3 2 1 32 32 H 1.08006 * 119.97728 * 359.97438 * 5 4 2 33 33 H 1.08000 * 120.02952 * 179.97438 * 6 5 4 34 34 H 1.09003 * 109.47099 * 59.99630 * 9 8 7 35 35 H 1.09000 * 109.46937 * 299.99855 * 9 8 7 36 36 H 1.09003 * 109.47086 * 59.99976 * 10 9 8 37 37 H 1.09000 * 109.47324 * 299.99972 * 10 9 8 38 38 H 0.97000 * 120.00290 * 5.03402 * 13 11 10 39 39 H 1.08001 * 120.00129 * 359.97438 * 16 15 14 40 40 H 1.07999 * 120.00033 * 180.24758 * 17 16 15 41 41 H 1.07992 * 120.00167 * 179.76174 * 18 17 16 42 42 H 1.08002 * 119.99743 * 179.97438 * 19 18 17 43 43 H 1.08007 * 120.00040 * 180.02562 * 20 19 18 44 44 H 1.09001 * 113.61479 * 25.42596 * 21 14 13 45 45 H 1.08998 * 113.61291 * 156.32138 * 21 14 13 46 46 H 0.96701 * 113.99571 * 82.47229 * 24 22 21 47 47 H 1.09004 * 113.61479 * 270.88993 * 25 22 21 48 48 H 1.09000 * 113.61972 * 139.97492 * 25 22 21 49 49 H 1.07995 * 120.02439 * 179.71928 * 26 7 6 50 50 H 1.08003 * 119.96939 * 180.31638 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6840 -2.0605 1.3972 6 6 2.1438 -2.7142 2.5240 7 6 2.8547 -2.0149 3.4885 8 8 3.3086 -2.6558 4.5976 9 6 4.0326 -1.8728 5.5488 10 6 4.4587 -2.7594 6.7206 11 6 5.2217 -1.9334 7.7240 12 8 5.4068 -0.7521 7.5215 13 7 5.6992 -2.5078 8.8458 14 6 6.3439 -1.6853 9.8725 15 6 7.6315 -1.0615 9.3992 16 6 8.2273 -0.0588 10.1412 17 6 9.4110 0.5100 9.7096 18 6 9.9935 0.0831 8.5308 19 6 9.3946 -0.9156 7.7860 20 6 8.2138 -1.4880 8.2203 21 6 6.4625 -2.3824 11.2381 22 6 5.0772 -1.8013 11.5670 23 1 4.9860 -1.4436 12.5925 24 8 3.9928 -2.6452 11.1750 25 6 5.3899 -0.6888 10.5522 26 6 3.0971 -0.6592 3.3213 27 6 2.6404 -0.0115 2.1898 28 1 -0.3933 0.4417 0.7651 29 1 1.7922 -0.5139 -0.8900 30 1 1.5615 2.4679 -1.2084 31 1 1.5880 2.4584 1.2243 32 1 1.1308 -2.6046 0.6458 33 1 1.9500 -3.7687 2.6539 34 1 3.3964 -1.0673 5.9156 35 1 4.9170 -1.4493 5.0727 36 1 5.0947 -3.5652 6.3540 37 1 3.5741 -3.1826 7.1965 38 1 5.6160 -3.4658 8.9735 39 1 7.7699 0.2777 11.0598 40 1 9.8786 1.2905 10.2913 41 1 10.9162 0.5302 8.1917 42 1 9.8495 -1.2488 6.8648 43 1 7.7461 -2.2686 7.6385 44 1 6.4755 -3.4704 11.1733 45 1 7.2622 -1.9851 11.8631 46 1 3.7913 -3.3468 11.8093 47 1 5.8965 0.1715 10.9897 48 1 4.5370 -0.4097 9.9336 49 1 3.6464 -0.1118 4.0729 50 1 2.8332 1.0428 2.0568 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_4549602.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:51:03 Heat of formation + Delta-G solvation = -58.676142 kcal Electronic energy + Delta-G solvation = -33033.229909 eV Core-core repulsion = 28572.686525 eV Total energy + Delta-G solvation = -4460.543384 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.18110 -41.22456 -39.90842 -39.29929 -39.02553 -37.20943 -36.31813 -34.19255 -33.16537 -31.99629 -31.70271 -31.62787 -31.26837 -27.13553 -26.79441 -26.02166 -25.12652 -23.61839 -23.34365 -22.48877 -22.13538 -21.44984 -20.28624 -19.48162 -18.73023 -18.34515 -18.03821 -17.63016 -17.37443 -17.18569 -16.85928 -16.44592 -16.32764 -16.04708 -15.87929 -15.64915 -15.49744 -15.42294 -15.08311 -14.68130 -14.56450 -14.42897 -14.31055 -14.19402 -14.04864 -13.86525 -13.60411 -13.38820 -13.36287 -12.98642 -12.85503 -12.79842 -12.44389 -12.22769 -12.13694 -12.01049 -11.90476 -11.74654 -11.50976 -11.48913 -11.10952 -10.84691 -10.51887 -10.08397 -9.96002 -9.76500 -9.52487 -9.13512 -4.91322 0.36644 0.39027 0.45589 0.55418 1.34544 1.59222 1.63814 1.70249 2.00546 2.44092 2.73265 2.80886 2.94367 3.32190 3.44908 3.50126 3.54707 3.63669 3.67839 3.77275 3.86644 3.88037 3.90375 4.01015 4.08680 4.11949 4.20684 4.26631 4.31231 4.36592 4.44092 4.49925 4.56115 4.58955 4.61636 4.63125 4.66295 4.68062 4.75232 4.80334 4.87954 4.96578 5.02855 5.09042 5.14689 5.25466 5.36705 5.39986 5.56494 5.59580 5.67036 5.76904 5.78406 6.12099 6.39110 6.44496 6.46511 6.52269 7.19472 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.682 3.318 4 C -0.157 4.157 5 C -0.053 4.053 6 C -0.151 4.151 7 C 0.139 3.861 8 O -0.316 6.316 9 C 0.075 3.925 10 C -0.141 4.141 11 C 0.523 3.477 12 O -0.525 6.525 13 N -0.699 5.699 14 C 0.200 3.800 15 C -0.072 4.072 16 C -0.114 4.114 17 C -0.117 4.117 18 C -0.121 4.121 19 C -0.118 4.118 20 C -0.098 4.098 21 C -0.163 4.163 22 C 0.079 3.921 23 H 0.074 0.926 24 O -0.546 6.546 25 C -0.130 4.130 26 C -0.203 4.203 27 C -0.077 4.077 28 H 0.375 0.625 29 H 0.117 0.883 30 H -0.257 1.257 31 H -0.261 1.261 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.105 0.895 37 H 0.108 0.892 38 H 0.405 0.595 39 H 0.122 0.878 40 H 0.123 0.877 41 H 0.121 0.879 42 H 0.120 0.880 43 H 0.113 0.887 44 H 0.083 0.917 45 H 0.107 0.893 46 H 0.382 0.618 47 H 0.106 0.894 48 H 0.086 0.914 49 H 0.134 0.866 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.384 -3.058 4.903 6.696 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.584 3.416 4 C -0.157 4.157 5 C -0.071 4.071 6 C -0.170 4.170 7 C 0.093 3.907 8 O -0.230 6.230 9 C 0.000 4.000 10 C -0.181 4.181 11 C 0.309 3.691 12 O -0.400 6.400 13 N -0.351 5.351 14 C 0.112 3.888 15 C -0.073 4.073 16 C -0.132 4.132 17 C -0.136 4.136 18 C -0.139 4.139 19 C -0.136 4.136 20 C -0.116 4.116 21 C -0.201 4.201 22 C 0.020 3.980 23 H 0.092 0.908 24 O -0.351 6.351 25 C -0.168 4.168 26 C -0.221 4.221 27 C -0.095 4.095 28 H 0.223 0.777 29 H 0.135 0.865 30 H -0.183 1.183 31 H -0.186 1.186 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.090 0.910 35 H 0.091 0.909 36 H 0.123 0.877 37 H 0.126 0.874 38 H 0.241 0.759 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.139 0.861 42 H 0.138 0.862 43 H 0.131 0.869 44 H 0.101 0.899 45 H 0.125 0.875 46 H 0.229 0.771 47 H 0.125 0.875 48 H 0.104 0.896 49 H 0.152 0.848 50 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 3.349 -1.477 3.746 5.237 hybrid contribution -0.931 -0.852 1.158 1.713 sum 2.417 -2.329 4.904 5.943 Atomic orbital electron populations 1.86594 1.17869 1.79955 1.49311 1.24929 0.83819 1.10727 0.98401 0.95006 0.91769 0.74756 0.80080 1.20159 1.02732 0.95112 0.97739 1.20833 0.96544 0.93457 0.96264 1.20507 1.01798 1.00837 0.93848 1.18999 0.94007 0.90917 0.86732 1.85975 1.69061 1.38554 1.29399 1.22415 0.96332 0.93276 0.88001 1.21463 1.02261 0.99562 0.94814 1.20201 0.78813 0.88215 0.81864 1.90773 1.57007 1.15986 1.76265 1.45437 1.59951 1.11128 1.18569 1.19820 0.89846 0.92283 0.86811 1.19694 0.95156 0.96872 0.95602 1.20880 0.95996 0.96365 1.00001 1.21120 0.95753 0.99927 0.96754 1.21183 1.00108 0.97365 0.95239 1.21148 0.95797 0.96914 0.99775 1.20849 0.95340 0.99763 0.95651 1.24042 0.99389 1.01609 0.95030 1.22727 0.85636 0.91945 0.97713 0.90762 1.86502 1.51479 1.46671 1.50493 1.23513 0.99788 0.96262 0.97214 1.21270 1.06396 0.93877 1.00597 1.20849 0.96231 0.99411 0.92964 0.77696 0.86519 1.18262 1.18608 0.84938 0.84876 0.90964 0.90853 0.87705 0.87384 0.75929 0.86048 0.85904 0.86059 0.86167 0.86879 0.89874 0.87517 0.77084 0.87540 0.89573 0.84835 0.85384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.07 12.83 -35.23 -0.45 -1.52 16 2 C -0.07 -0.04 2.80 36.01 0.10 0.06 16 3 Si 0.68 -0.01 29.88 -169.99 -5.08 -5.09 16 4 C -0.16 -0.19 5.35 -104.60 -0.56 -0.75 16 5 C -0.05 -0.07 9.68 -39.61 -0.38 -0.46 16 6 C -0.15 -0.27 9.99 -39.43 -0.39 -0.66 16 7 C 0.14 0.33 6.69 -39.21 -0.26 0.07 16 8 O -0.32 -0.66 10.14 -19.43 -0.20 -0.85 16 9 C 0.08 0.06 4.03 37.16 0.15 0.21 16 10 C -0.14 0.15 6.07 -27.88 -0.17 -0.02 16 11 C 0.52 0.46 6.13 -10.98 -0.07 0.39 16 12 O -0.52 -2.35 14.29 5.56 0.08 -2.27 16 13 N -0.70 0.64 3.87 -47.92 -0.19 0.46 16 14 C 0.20 -0.06 0.94 -132.16 -0.12 -0.19 16 15 C -0.07 -0.10 4.66 -104.62 -0.49 -0.59 16 16 C -0.11 -0.10 8.68 -39.58 -0.34 -0.44 16 17 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 18 C -0.12 -0.16 10.05 -39.58 -0.40 -0.56 16 19 C -0.12 -0.21 10.05 -39.59 -0.40 -0.61 16 20 C -0.10 -0.20 8.48 -39.58 -0.34 -0.53 16 21 C -0.16 0.42 7.12 -25.92 -0.18 0.24 16 22 C 0.08 -0.16 5.27 -25.92 -0.14 -0.30 16 23 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 24 O -0.55 0.89 13.10 -35.23 -0.46 0.43 16 25 C -0.13 -0.01 6.66 -25.91 -0.17 -0.19 16 26 C -0.20 -0.35 9.04 -39.43 -0.36 -0.71 16 27 C -0.08 -0.09 8.66 -39.61 -0.34 -0.43 16 28 H 0.38 -0.25 8.70 45.56 0.40 0.15 16 29 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 30 H -0.26 -0.82 7.11 56.52 0.40 -0.41 16 31 H -0.26 -0.51 7.01 56.52 0.40 -0.12 16 32 H 0.13 0.05 8.06 -52.48 -0.42 -0.38 16 33 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 34 H 0.07 0.10 7.61 -51.93 -0.40 -0.30 16 35 H 0.07 0.07 7.63 -51.93 -0.40 -0.33 16 36 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 37 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 38 H 0.41 -1.28 8.67 -40.82 -0.35 -1.64 16 39 H 0.12 -0.15 6.58 -52.49 -0.35 -0.49 16 40 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 41 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 42 H 0.12 0.03 8.06 -52.49 -0.42 -0.40 16 43 H 0.11 0.15 6.55 -52.48 -0.34 -0.19 16 44 H 0.08 -0.29 8.10 -51.93 -0.42 -0.71 16 45 H 0.11 -0.34 7.76 -51.93 -0.40 -0.74 16 46 H 0.38 -2.11 9.12 45.56 0.42 -1.70 16 47 H 0.11 -0.09 6.25 -51.93 -0.32 -0.42 16 48 H 0.09 0.24 7.53 -51.93 -0.39 -0.15 16 49 H 0.13 0.11 6.30 -52.49 -0.33 -0.22 16 50 H 0.13 -0.05 4.84 -52.48 -0.25 -0.30 16 LS Contribution 406.90 15.07 6.13 6.13 Total: 0.00 -9.24 406.90 -11.57 -20.81 By element: Atomic # 1 Polarization: -5.98 SS G_CDS: -6.14 Total: -12.13 kcal Atomic # 6 Polarization: -0.71 SS G_CDS: -5.26 Total: -5.97 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.19 Total: 0.46 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -1.03 Total: -4.21 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.08 Total: -5.09 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -9.24 -11.57 -20.81 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_4549602.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.866 kcal (2) G-P(sol) polarization free energy of solvation -9.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.106 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.570 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.810 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds