Wall clock time and date at job start Sat Mar 6 2021 23:51:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86294 * 109.47278 * 2 1 4 4 C 1.50706 * 109.47076 * 120.00530 * 2 1 3 5 5 C 1.38245 * 119.96666 * 244.99948 * 4 2 1 6 6 C 1.38288 * 120.11039 * 180.02562 * 5 4 2 7 7 C 1.38124 * 120.05630 * 359.95814 * 6 5 4 8 8 C 1.38756 * 119.94190 * 0.02562 * 7 6 5 9 9 O 1.35901 * 120.05645 * 180.02562 * 8 7 6 10 10 C 1.42900 * 116.99771 * 359.97438 * 9 8 7 11 11 C 1.53003 * 109.46963 * 180.02562 * 10 9 8 12 12 C 1.50701 * 109.47038 * 180.02562 * 11 10 9 13 13 O 1.21278 * 119.99823 * 0.02562 * 12 11 10 14 14 N 1.34778 * 119.99696 * 180.02562 * 12 11 10 15 15 C 1.46510 * 119.99591 * 184.77714 * 14 12 11 16 16 C 1.50694 * 112.84796 * 65.43966 * 15 14 12 17 17 C 1.38234 * 120.00234 * 194.32495 * 16 15 14 18 18 C 1.38236 * 120.00555 * 179.78998 * 17 16 15 19 19 C 1.38234 * 119.99493 * 0.44030 * 18 17 16 20 20 C 1.38238 * 120.00351 * 359.81587 * 19 18 17 21 21 C 1.38237 * 120.00117 * 14.60207 * 16 15 14 22 22 C 1.53778 * 113.61397 * 294.24439 * 15 14 12 23 23 C 1.54052 * 86.98533 * 270.83911 * 22 15 14 24 24 H 1.09001 * 113.62176 * 220.02632 * 23 22 15 25 25 O 1.42900 * 113.68879 * 89.12700 * 23 22 15 26 26 C 1.53779 * 113.61317 * 196.63526 * 15 14 12 27 27 C 1.38160 * 119.97246 * 65.24874 * 4 2 1 28 28 H 0.96701 * 113.99291 * 300.00018 * 1 2 3 29 29 H 1.08999 * 109.47094 * 239.99742 * 2 1 3 30 30 H 1.48501 * 110.00284 * 300.00129 * 3 2 1 31 31 H 1.48497 * 109.99882 * 61.32378 * 3 2 1 32 32 H 1.08000 * 119.94743 * 359.97438 * 5 4 2 33 33 H 1.07998 * 119.97664 * 179.97438 * 6 5 4 34 34 H 1.07998 * 120.03367 * 180.02562 * 7 6 5 35 35 H 1.08994 * 109.47415 * 60.00318 * 10 9 8 36 36 H 1.08996 * 109.47592 * 300.00135 * 10 9 8 37 37 H 1.09000 * 109.47225 * 60.00499 * 11 10 9 38 38 H 1.08998 * 109.47455 * 300.00149 * 11 10 9 39 39 H 0.96994 * 120.00266 * 5.05540 * 14 12 11 40 40 H 1.08004 * 119.99768 * 0.02562 * 17 16 15 41 41 H 1.08001 * 120.00113 * 180.27553 * 18 17 16 42 42 H 1.07998 * 119.99820 * 179.83192 * 19 18 17 43 43 H 1.07993 * 119.99881 * 180.02562 * 20 19 18 44 44 H 1.07997 * 119.99935 * 359.97341 * 21 16 15 45 45 H 1.08998 * 113.61600 * 25.43225 * 22 15 14 46 46 H 1.08994 * 113.61516 * 156.33686 * 22 15 14 47 47 H 0.96694 * 114.00040 * 82.47658 * 25 23 22 48 48 H 1.08996 * 113.61446 * 203.66871 * 26 15 14 49 49 H 1.09001 * 113.61344 * 334.56780 * 26 15 14 50 50 H 1.07999 * 120.03509 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6388 -0.0118 2.1909 6 6 3.1015 -0.6609 3.3209 7 6 2.8572 -2.0095 3.4929 8 6 2.1471 -2.7129 2.5304 9 8 1.9049 -4.0397 2.6976 10 6 2.4113 -4.6466 3.8881 11 6 2.0436 -6.1318 3.8994 12 6 2.5770 -6.7717 5.1552 13 8 3.1904 -6.1055 5.9618 14 7 2.3724 -8.0845 5.3818 15 6 2.7985 -8.6842 6.6488 16 6 2.0387 -8.1482 7.8346 17 6 2.5051 -8.3777 9.1155 18 6 1.8105 -7.8823 10.2032 19 6 0.6446 -7.1652 10.0104 20 6 0.1753 -6.9401 8.7297 21 6 0.8723 -7.4319 7.6419 22 6 4.3236 -8.6897 6.8455 23 6 4.3286 -10.0568 6.1353 24 1 5.0156 -10.7772 6.5795 25 8 4.4616 -9.9656 4.7155 26 6 2.8745 -10.2196 6.6087 27 6 1.6890 -2.0607 1.3951 28 1 -0.3932 0.4417 0.7651 29 1 1.7924 -0.5139 -0.8899 30 1 1.5616 2.4679 -1.2085 31 1 1.5881 2.4584 1.2243 32 1 2.8310 1.0426 2.0582 33 1 3.6543 -0.1131 4.0696 34 1 3.2184 -2.5160 4.3757 35 1 1.9754 -4.1574 4.7590 36 1 3.4957 -4.5410 3.9169 37 1 2.4799 -6.6208 3.0285 38 1 0.9592 -6.2379 3.8704 39 1 1.9467 -8.6330 4.7045 40 1 3.4143 -8.9409 9.2663 41 1 2.1774 -8.0579 11.2037 42 1 0.1005 -6.7804 10.8602 43 1 -0.7353 -6.3795 8.5791 44 1 0.5057 -7.2560 6.6414 45 1 4.8384 -7.9057 6.2902 46 1 4.6288 -8.7396 7.8907 47 1 5.3739 -9.8632 4.4117 48 1 2.7842 -10.6870 7.5892 49 1 2.2202 -10.6699 5.8622 50 1 1.1402 -2.6071 0.6424 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_4549614.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:51:07 Heat of formation + Delta-G solvation = -59.059048 kcal Electronic energy + Delta-G solvation = -33053.707896 eV Core-core repulsion = 28593.147908 eV Total energy + Delta-G solvation = -4460.559988 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.16741 -41.23376 -39.92120 -39.29506 -38.98934 -37.30616 -36.30226 -34.19927 -33.07662 -32.42839 -31.72528 -31.65067 -30.71711 -27.11595 -27.02477 -26.25148 -24.90422 -23.63242 -23.47532 -22.58162 -22.03157 -21.36846 -20.31917 -19.32654 -18.71815 -18.17629 -17.97305 -17.59063 -17.40347 -17.19342 -17.03745 -16.71777 -16.37968 -16.16878 -15.83496 -15.67875 -15.46153 -15.34343 -15.08873 -14.88678 -14.62799 -14.37084 -14.30819 -14.04485 -14.00352 -13.89983 -13.66136 -13.37445 -13.18056 -12.98184 -12.89529 -12.82087 -12.49420 -12.35043 -12.09475 -11.95921 -11.87684 -11.78380 -11.61801 -11.50845 -11.06110 -10.77441 -10.59857 -10.08395 -9.88656 -9.79741 -9.55626 -9.19150 -4.92696 0.26685 0.43056 0.46453 0.52175 1.29390 1.59565 1.62749 1.68761 1.98448 2.44617 2.72350 2.80343 2.91332 3.39185 3.41108 3.50785 3.55133 3.62995 3.69028 3.71300 3.85291 3.87259 3.93747 4.06677 4.09738 4.10447 4.20404 4.25223 4.26889 4.33359 4.38576 4.52865 4.56850 4.57926 4.60402 4.62122 4.62998 4.65378 4.75288 4.77829 4.89240 4.97872 5.02568 5.06996 5.12812 5.32179 5.39690 5.43355 5.49573 5.57265 5.64556 5.73906 5.75072 6.09469 6.39768 6.42734 6.44917 6.53843 7.18646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.076 4.076 3 Si 0.691 3.309 4 C -0.080 4.080 5 C -0.157 4.157 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.133 3.867 9 O -0.316 6.316 10 C 0.076 3.924 11 C -0.142 4.142 12 C 0.523 3.477 13 O -0.527 6.527 14 N -0.699 5.699 15 C 0.199 3.801 16 C -0.072 4.072 17 C -0.113 4.113 18 C -0.116 4.116 19 C -0.121 4.121 20 C -0.118 4.118 21 C -0.104 4.104 22 C -0.167 4.167 23 C 0.079 3.921 24 H 0.074 0.926 25 O -0.548 6.548 26 C -0.125 4.125 27 C -0.126 4.126 28 H 0.376 0.624 29 H 0.120 0.880 30 H -0.257 1.257 31 H -0.260 1.260 32 H 0.128 0.872 33 H 0.130 0.870 34 H 0.132 0.868 35 H 0.072 0.928 36 H 0.072 0.928 37 H 0.107 0.893 38 H 0.105 0.895 39 H 0.407 0.593 40 H 0.123 0.877 41 H 0.123 0.877 42 H 0.122 0.878 43 H 0.121 0.879 44 H 0.114 0.886 45 H 0.085 0.915 46 H 0.100 0.900 47 H 0.384 0.616 48 H 0.112 0.888 49 H 0.086 0.914 50 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.647 -3.247 1.378 4.411 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.592 3.408 4 C -0.081 4.081 5 C -0.174 4.174 6 C -0.091 4.091 7 C -0.220 4.220 8 C 0.088 3.912 9 O -0.230 6.230 10 C 0.001 3.999 11 C -0.182 4.182 12 C 0.310 3.690 13 O -0.403 6.403 14 N -0.351 5.351 15 C 0.112 3.888 16 C -0.074 4.074 17 C -0.131 4.131 18 C -0.134 4.134 19 C -0.139 4.139 20 C -0.136 4.136 21 C -0.123 4.123 22 C -0.205 4.205 23 C 0.019 3.981 24 H 0.092 0.908 25 O -0.354 6.354 26 C -0.162 4.162 27 C -0.144 4.144 28 H 0.224 0.776 29 H 0.137 0.863 30 H -0.183 1.183 31 H -0.185 1.185 32 H 0.146 0.854 33 H 0.148 0.852 34 H 0.150 0.850 35 H 0.090 0.910 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.124 0.876 39 H 0.243 0.757 40 H 0.140 0.860 41 H 0.141 0.859 42 H 0.140 0.860 43 H 0.139 0.861 44 H 0.132 0.868 45 H 0.104 0.896 46 H 0.118 0.882 47 H 0.232 0.768 48 H 0.130 0.870 49 H 0.105 0.895 50 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.199 -2.438 1.302 3.532 hybrid contribution -0.605 -0.353 0.508 0.865 sum 1.594 -2.791 1.809 3.688 Atomic orbital electron populations 1.86611 1.17561 1.80015 1.49274 1.25078 0.84069 1.11131 0.98299 0.94837 0.91700 0.74202 0.80059 1.20053 0.98017 0.93587 0.96419 1.20972 1.01430 0.99928 0.95112 1.20925 0.97587 0.93657 0.96966 1.21398 1.04096 0.95958 1.00577 1.18963 0.95117 0.82687 0.94463 1.85979 1.74392 1.20277 1.42363 1.22396 0.99626 0.91808 0.86084 1.21473 1.04143 0.94994 0.97582 1.20201 0.79528 0.81936 0.87380 1.90758 1.39786 1.62454 1.47314 1.45464 1.62530 1.09193 1.17878 1.19820 0.93939 0.92807 0.82256 1.19718 0.95364 0.98603 0.93682 1.20900 0.99857 1.00661 0.91698 1.21134 0.95455 0.98064 0.98787 1.21190 0.96640 0.98914 0.97163 1.21155 0.99928 0.99743 0.92734 1.20883 0.94937 0.97716 0.98722 1.24139 0.95169 0.98827 1.02368 1.22764 0.97364 0.96125 0.81820 0.90808 1.86410 1.33045 1.96028 1.19930 1.23432 0.96250 0.93487 1.03079 1.20253 1.03321 0.93696 0.97158 0.77618 0.86262 1.18257 1.18522 0.85412 0.85207 0.85011 0.91017 0.90944 0.87434 0.87640 0.75713 0.85952 0.85853 0.86028 0.86133 0.86771 0.89590 0.88183 0.76841 0.87009 0.89514 0.84861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.02 12.84 -35.23 -0.45 -1.47 16 2 C -0.08 -0.04 2.80 36.01 0.10 0.07 16 3 Si 0.69 -0.36 29.88 -169.99 -5.08 -5.44 16 4 C -0.08 -0.10 5.35 -104.65 -0.56 -0.66 16 5 C -0.16 -0.09 8.67 -39.56 -0.34 -0.43 16 6 C -0.07 -0.05 10.04 -39.60 -0.40 -0.45 16 7 C -0.20 -0.34 9.04 -39.43 -0.36 -0.70 16 8 C 0.13 0.35 6.69 -39.21 -0.26 0.09 16 9 O -0.32 -0.75 10.14 -19.43 -0.20 -0.95 16 10 C 0.08 0.07 4.03 37.16 0.15 0.22 16 11 C -0.14 0.14 6.07 -27.88 -0.17 -0.03 16 12 C 0.52 0.46 6.19 -10.98 -0.07 0.39 16 13 O -0.53 -2.33 14.44 5.56 0.08 -2.25 16 14 N -0.70 0.48 3.84 -47.92 -0.18 0.29 16 15 C 0.20 -0.03 0.93 -132.16 -0.12 -0.15 16 16 C -0.07 -0.10 4.73 -104.63 -0.49 -0.60 16 17 C -0.11 -0.10 8.77 -39.58 -0.35 -0.45 16 18 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 19 C -0.12 -0.16 10.05 -39.58 -0.40 -0.56 16 20 C -0.12 -0.20 10.05 -39.58 -0.40 -0.60 16 21 C -0.10 -0.21 8.81 -39.58 -0.35 -0.55 16 22 C -0.17 0.05 6.62 -25.78 -0.17 -0.12 16 23 C 0.08 -0.14 5.28 -25.77 -0.14 -0.28 16 24 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 25 O -0.55 0.73 13.09 -35.23 -0.46 0.27 16 26 C -0.12 0.22 7.12 -25.92 -0.18 0.03 16 27 C -0.13 -0.30 9.63 -39.43 -0.38 -0.68 16 28 H 0.38 -0.33 8.70 45.56 0.40 0.07 16 29 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 30 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 31 H -0.26 -0.35 7.01 56.52 0.40 0.05 16 32 H 0.13 -0.14 4.84 -52.49 -0.25 -0.40 16 33 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 34 H 0.13 0.11 6.30 -52.49 -0.33 -0.22 16 35 H 0.07 0.10 7.62 -51.93 -0.40 -0.30 16 36 H 0.07 0.08 7.62 -51.93 -0.40 -0.31 16 37 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 38 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 39 H 0.41 -0.99 8.66 -40.82 -0.35 -1.35 16 40 H 0.12 -0.14 6.48 -52.48 -0.34 -0.48 16 41 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 42 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 43 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 44 H 0.11 0.13 6.69 -52.49 -0.35 -0.22 16 45 H 0.09 0.15 7.24 -51.93 -0.38 -0.22 16 46 H 0.10 -0.10 6.16 -51.93 -0.32 -0.42 16 47 H 0.38 -1.68 9.12 45.56 0.42 -1.27 16 48 H 0.11 -0.30 7.83 -51.93 -0.41 -0.71 16 49 H 0.09 -0.16 8.09 -51.93 -0.42 -0.58 16 50 H 0.13 0.30 8.06 -52.49 -0.42 -0.13 16 LS Contribution 407.25 15.07 6.14 6.14 Total: 0.00 -8.99 407.25 -11.57 -20.56 By element: Atomic # 1 Polarization: -5.04 SS G_CDS: -6.13 Total: -11.17 kcal Atomic # 6 Polarization: -0.70 SS G_CDS: -5.28 Total: -5.98 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -0.18 Total: 0.29 kcal Atomic # 8 Polarization: -3.37 SS G_CDS: -1.03 Total: -4.40 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.08 Total: -5.44 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -8.99 -11.57 -20.56 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_4549614.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.503 kcal (2) G-P(sol) polarization free energy of solvation -8.986 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.556 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.059 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds