Wall clock time and date at job start Sat Mar 6 2021 23:51:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86292 * 109.47294 * 2 1 4 4 C 1.50696 * 109.46897 * 120.00496 * 2 1 3 5 5 C 1.38240 * 119.95112 * 64.72102 * 4 2 1 6 6 C 1.38166 * 120.05981 * 179.72477 * 5 4 2 7 7 N 1.48006 * 120.02760 * 180.27549 * 6 5 4 8 8 O 1.21803 * 120.00375 * 0.27591 * 7 6 5 9 9 O 1.21802 * 119.99612 * 180.27073 * 7 6 5 10 10 C 1.38708 * 119.94234 * 0.54939 * 6 5 4 11 11 O 1.35902 * 120.05681 * 179.70054 * 10 6 5 12 12 C 1.42898 * 117.00062 * 180.02562 * 11 10 6 13 13 C 1.50695 * 109.46997 * 180.02562 * 12 11 10 14 14 O 1.21284 * 120.00357 * 359.97438 * 13 12 11 15 15 N 1.34776 * 120.00092 * 180.02562 * 13 12 11 16 16 C 1.46503 * 120.00374 * 175.26694 * 15 13 12 17 17 C 1.50698 * 112.84844 * 72.63218 * 16 15 13 18 18 C 1.38234 * 119.99729 * 192.97695 * 17 16 15 19 19 C 1.38237 * 119.99656 * 179.79032 * 18 17 16 20 20 C 1.38233 * 119.99943 * 0.46214 * 19 18 17 21 21 C 1.38228 * 120.00235 * 359.76904 * 20 19 18 22 22 C 1.38232 * 119.99921 * 13.24914 * 17 16 15 23 23 C 1.53789 * 113.61204 * 301.43700 * 16 15 13 24 24 C 1.53780 * 87.08278 * 270.88274 * 23 16 15 25 25 H 1.08988 * 113.61553 * 220.02150 * 24 23 16 26 26 O 1.42905 * 113.61332 * 89.19970 * 24 23 16 27 27 C 1.53779 * 87.08176 * 334.57163 * 24 23 16 28 28 C 1.38757 * 119.88839 * 359.72605 * 10 6 5 29 29 C 1.38122 * 119.94404 * 359.97438 * 28 10 6 30 30 H 0.96700 * 113.99694 * 300.00004 * 1 2 3 31 31 H 1.08996 * 109.46677 * 239.99664 * 2 1 3 32 32 H 1.48498 * 110.00311 * 299.99879 * 3 2 1 33 33 H 1.48503 * 110.00167 * 61.32401 * 3 2 1 34 34 H 1.08009 * 119.96573 * 359.97438 * 5 4 2 35 35 H 1.09001 * 109.47189 * 300.00570 * 12 11 10 36 36 H 1.08999 * 109.46645 * 60.00252 * 12 11 10 37 37 H 0.97001 * 120.00147 * 355.26842 * 15 13 12 38 38 H 1.08002 * 120.00084 * 0.02562 * 18 17 16 39 39 H 1.08005 * 119.99817 * 180.25370 * 19 18 17 40 40 H 1.07998 * 119.99957 * 179.79142 * 20 19 18 41 41 H 1.08004 * 120.00447 * 179.97438 * 21 20 19 42 42 H 1.07997 * 120.00254 * 359.97438 * 22 17 16 43 43 H 1.08996 * 113.61205 * 25.43147 * 23 16 15 44 44 H 1.08998 * 113.60919 * 156.24897 * 23 16 15 45 45 H 0.96699 * 113.99618 * 180.02562 * 26 24 23 46 46 H 1.09004 * 113.61359 * 270.88744 * 27 24 23 47 47 H 1.09004 * 113.61967 * 139.98208 * 27 24 23 48 48 H 1.07997 * 120.02831 * 180.02562 * 28 10 6 49 49 H 1.07996 * 119.97086 * 179.97438 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6791 -2.0591 1.3999 6 6 2.1434 -2.7140 2.5244 7 7 1.8782 -4.1592 2.7022 8 8 1.2547 -4.7729 1.8547 9 8 2.2836 -4.7349 3.6961 10 6 2.8534 -2.0147 3.4892 11 8 3.3059 -2.6552 4.5991 12 6 4.0291 -1.8720 5.5506 13 6 4.4485 -2.7452 6.7050 14 8 4.1564 -3.9223 6.7124 15 7 5.1472 -2.2179 7.7298 16 6 5.4654 -3.0405 8.8996 17 6 6.5278 -4.0716 8.6184 18 6 6.7534 -5.0950 9.5199 19 6 7.7250 -6.0433 9.2599 20 6 8.4774 -5.9628 8.1030 21 6 8.2550 -4.9367 7.2039 22 6 7.2804 -3.9908 7.4618 23 6 4.2249 -3.6111 9.6071 24 6 4.2104 -2.3246 10.4493 25 1 3.9665 -2.4921 11.4983 26 8 3.4488 -1.2662 9.8646 27 6 5.7204 -2.2227 10.1767 28 6 3.1003 -0.6599 3.3195 29 6 2.6393 -0.0111 2.1906 30 1 -0.3933 0.4417 0.7651 31 1 1.7922 -0.5139 -0.8899 32 1 1.5616 2.4678 -1.2085 33 1 1.5880 2.4585 1.2243 34 1 1.1220 -2.6021 0.6506 35 1 4.9140 -1.4487 5.0754 36 1 3.3927 -1.0662 5.9165 37 1 5.4395 -1.2937 7.6928 38 1 6.1681 -5.1558 10.4255 39 1 7.8986 -6.8453 9.9622 40 1 9.2388 -6.7018 7.9015 41 1 8.8432 -4.8735 6.3002 42 1 7.1069 -3.1890 6.7594 43 1 3.3587 -3.7150 8.9537 44 1 4.4284 -4.5116 10.1865 45 1 3.4363 -0.4542 10.3896 46 1 6.3331 -2.7429 10.9130 47 1 6.0616 -1.2057 9.9831 48 1 3.6533 -0.1132 4.0691 49 1 2.8309 1.0434 2.0583 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_4549638.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:51:35 Heat of formation + Delta-G solvation = -46.240340 kcal Electronic energy + Delta-G solvation = -38336.758404 eV Core-core repulsion = 33201.275461 eV Total energy + Delta-G solvation = -5135.482944 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.144 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -43.30669 -42.20020 -41.59652 -40.13026 -39.37393 -39.01878 -37.63205 -37.47460 -36.19735 -34.22248 -33.46418 -32.28943 -31.82232 -31.64823 -29.81100 -27.82829 -26.98341 -26.64145 -25.66716 -24.14902 -23.51183 -22.89727 -22.50432 -21.73919 -20.59342 -20.24064 -19.78988 -19.17729 -18.72198 -18.64503 -18.54091 -18.23719 -17.75992 -17.49647 -17.13320 -16.93612 -16.41774 -16.36879 -16.14906 -15.74065 -15.71208 -15.55086 -15.29738 -15.19669 -14.83635 -14.63445 -14.36554 -14.07455 -14.01794 -13.84272 -13.68626 -13.55670 -13.25248 -13.19811 -12.95324 -12.72157 -12.41279 -12.36201 -12.30580 -12.28527 -12.24200 -12.21060 -11.92735 -11.79097 -11.46069 -10.94717 -10.87565 -10.86296 -10.73634 -10.09484 -9.83892 -9.82676 -9.58064 -4.91341 -1.32853 -0.25853 0.14168 0.33994 0.39935 0.47920 1.18457 1.26275 1.51743 1.59193 2.00086 2.04003 2.28908 2.78069 3.09617 3.13042 3.22922 3.33999 3.43828 3.46075 3.58873 3.64767 3.69781 3.70068 3.74291 3.84423 3.88482 3.99722 4.06671 4.10435 4.23410 4.27324 4.37440 4.38325 4.54546 4.60312 4.62316 4.62519 4.69173 4.82338 4.83779 4.88630 4.98201 4.99092 5.05975 5.06393 5.13460 5.17943 5.39092 5.54267 5.60546 5.70225 5.76860 6.08348 6.40295 6.44947 6.47907 6.93495 7.21508 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.091 4.091 3 Si 0.789 3.211 4 C -0.147 4.147 5 C -0.002 4.002 6 C -0.105 4.105 7 N 0.035 4.965 8 O -0.200 6.200 9 O -0.178 6.178 10 C 0.193 3.807 11 O -0.290 6.290 12 C 0.026 3.974 13 C 0.510 3.490 14 O -0.550 6.550 15 N -0.680 5.680 16 C 0.196 3.804 17 C -0.084 4.084 18 C -0.124 4.124 19 C -0.127 4.127 20 C -0.136 4.136 21 C -0.134 4.134 22 C -0.119 4.119 23 C -0.144 4.144 24 C 0.089 3.911 25 H 0.090 0.910 26 O -0.562 6.562 27 C -0.142 4.142 28 C -0.190 4.190 29 C -0.005 4.005 30 H 0.389 0.611 31 H 0.126 0.874 32 H -0.308 1.308 33 H -0.258 1.258 34 H 0.151 0.849 35 H 0.143 0.857 36 H 0.137 0.863 37 H 0.421 0.579 38 H 0.139 0.861 39 H 0.139 0.861 40 H 0.134 0.866 41 H 0.130 0.870 42 H 0.121 0.879 43 H 0.051 0.949 44 H 0.109 0.891 45 H 0.399 0.601 46 H 0.115 0.885 47 H 0.104 0.896 48 H 0.203 0.797 49 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.537 14.783 5.154 17.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.198 4.198 3 Si 0.692 3.308 4 C -0.148 4.148 5 C -0.022 4.022 6 C -0.190 4.190 7 N 0.545 4.455 8 O -0.408 6.408 9 O -0.390 6.390 10 C 0.144 3.856 11 O -0.200 6.200 12 C -0.051 4.051 13 C 0.296 3.704 14 O -0.426 6.426 15 N -0.335 5.335 16 C 0.108 3.892 17 C -0.086 4.086 18 C -0.142 4.142 19 C -0.145 4.145 20 C -0.154 4.154 21 C -0.152 4.152 22 C -0.137 4.137 23 C -0.183 4.183 24 C 0.030 3.970 25 H 0.107 0.893 26 O -0.371 6.371 27 C -0.180 4.180 28 C -0.208 4.208 29 C -0.022 4.022 30 H 0.239 0.761 31 H 0.144 0.856 32 H -0.237 1.237 33 H -0.184 1.184 34 H 0.169 0.831 35 H 0.161 0.839 36 H 0.155 0.845 37 H 0.260 0.740 38 H 0.157 0.843 39 H 0.157 0.843 40 H 0.152 0.848 41 H 0.148 0.852 42 H 0.139 0.861 43 H 0.070 0.930 44 H 0.127 0.873 45 H 0.250 0.750 46 H 0.134 0.866 47 H 0.122 0.878 48 H 0.220 0.780 49 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 7.178 14.449 4.150 16.659 hybrid contribution -1.276 -0.755 0.499 1.564 sum 5.903 13.694 4.650 15.620 Atomic orbital electron populations 1.86638 1.18448 1.80495 1.50305 1.25516 0.83623 1.13181 0.97464 0.94095 0.89296 0.69911 0.77524 1.20370 1.02737 0.92069 0.99636 1.20870 0.93155 0.95141 0.92996 1.20866 1.15832 0.79738 1.02565 1.43904 0.97894 1.04280 0.99451 1.94495 1.40139 1.67967 1.38240 1.94691 1.53960 1.70909 1.19471 1.19001 0.89623 0.92221 0.84805 1.86477 1.67395 1.37869 1.28244 1.23077 0.99939 0.93786 0.88301 1.20375 0.78225 0.88072 0.83740 1.90856 1.54648 1.18217 1.78848 1.45092 1.55896 1.15869 1.16619 1.19938 0.92688 0.90820 0.85718 1.20030 0.96563 0.96749 0.95218 1.21181 0.98552 0.94369 1.00105 1.21429 0.95983 0.99277 0.97834 1.21444 1.00405 0.98724 0.94833 1.21401 0.98566 0.95296 0.99947 1.21050 0.96016 0.99581 0.97033 1.23577 0.97630 0.98129 0.98916 1.22636 0.90348 0.87628 0.96424 0.89268 1.86455 1.72867 1.25647 1.52092 1.23970 0.97865 1.01843 0.94343 1.21788 1.06489 0.89888 1.02666 1.21749 0.88992 1.01838 0.89659 0.76135 0.85606 1.23683 1.18350 0.83089 0.83945 0.84500 0.74001 0.84327 0.84323 0.84847 0.85227 0.86133 0.93041 0.87294 0.75045 0.86649 0.87795 0.77967 0.79518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.62 12.83 -148.98 -1.91 -1.29 16 2 C -0.09 0.54 2.80 71.23 0.20 0.74 16 3 Si 0.79 -7.76 29.88 68.60 2.05 -5.71 16 4 C -0.15 0.76 5.35 -19.85 -0.11 0.65 16 5 C 0.00 -0.01 9.18 22.25 0.20 0.20 16 6 C -0.10 -0.84 6.87 36.47 0.25 -0.59 16 7 N 0.03 0.63 4.45 -46.24 -0.21 0.42 16 8 O -0.20 -3.94 18.45 18.88 0.35 -3.59 16 9 O -0.18 -4.14 17.24 25.61 0.44 -3.70 16 10 C 0.19 0.37 6.67 22.51 0.15 0.52 16 11 O -0.29 -1.82 7.68 -63.43 -0.49 -2.30 16 12 C 0.03 -0.13 5.22 71.23 0.37 0.24 16 13 C 0.51 1.69 6.58 87.66 0.58 2.26 16 14 O -0.55 -9.00 14.97 16.00 0.24 -8.76 16 15 N -0.68 2.46 3.65 -423.91 -1.55 0.91 16 16 C 0.20 -0.17 0.94 3.38 0.00 -0.17 16 17 C -0.08 -0.30 4.86 -19.87 -0.10 -0.40 16 18 C -0.12 -0.37 8.70 22.27 0.19 -0.17 16 19 C -0.13 -0.43 10.05 22.27 0.22 -0.21 16 20 C -0.14 -0.59 10.05 22.27 0.22 -0.37 16 21 C -0.13 -0.68 10.05 22.27 0.22 -0.45 16 22 C -0.12 -0.57 9.05 22.27 0.20 -0.37 16 23 C -0.14 -0.32 6.55 31.12 0.20 -0.12 16 24 C 0.09 -0.46 5.27 31.12 0.16 -0.30 16 25 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 26 O -0.56 3.02 13.09 -148.98 -1.95 1.07 16 27 C -0.14 1.10 7.14 31.12 0.22 1.32 16 28 C -0.19 1.82 9.04 22.37 0.20 2.02 16 29 C -0.01 0.06 8.66 22.26 0.19 0.25 16 30 H 0.39 -2.96 8.70 -74.06 -0.64 -3.60 16 31 H 0.13 -0.80 7.96 -2.39 -0.02 -0.82 16 32 H -0.31 -0.04 7.11 99.48 0.71 0.66 16 33 H -0.26 2.37 7.01 99.48 0.70 3.07 16 34 H 0.15 0.64 7.61 -2.91 -0.02 0.62 16 35 H 0.14 -2.02 7.66 -2.39 -0.02 -2.04 16 36 H 0.14 -1.68 7.66 -2.39 -0.02 -1.70 16 37 H 0.42 -4.93 8.72 -92.71 -0.81 -5.74 16 38 H 0.14 -0.21 6.56 -2.91 -0.02 -0.23 16 39 H 0.14 -0.10 8.06 -2.91 -0.02 -0.12 16 40 H 0.13 0.10 8.06 -2.91 -0.02 0.08 16 41 H 0.13 0.24 8.06 -2.91 -0.02 0.21 16 42 H 0.12 0.23 6.86 -2.91 -0.02 0.21 16 43 H 0.05 0.55 6.94 -2.39 -0.02 0.53 16 44 H 0.11 0.09 6.23 -2.39 -0.01 0.07 16 45 H 0.40 -5.68 9.12 -74.06 -0.68 -6.35 16 46 H 0.12 -1.02 7.79 -2.38 -0.02 -1.04 16 47 H 0.10 -1.21 8.11 -2.39 -0.02 -1.23 16 48 H 0.20 -3.89 6.30 -2.91 -0.02 -3.90 16 49 H 0.19 -3.43 4.84 -2.91 -0.01 -3.44 16 Total: 0.00 -42.96 412.74 -0.45 -43.41 By element: Atomic # 1 Polarization: -24.46 SS G_CDS: -1.03 Total: -25.49 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: 3.61 Total: 5.05 kcal Atomic # 7 Polarization: 3.09 SS G_CDS: -1.75 Total: 1.34 kcal Atomic # 8 Polarization: -15.26 SS G_CDS: -3.32 Total: -18.58 kcal Atomic # 14 Polarization: -7.76 SS G_CDS: 2.05 Total: -5.71 kcal Total: -42.96 -0.45 -43.41 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_4549638.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.834 kcal (2) G-P(sol) polarization free energy of solvation -42.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.406 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds