Wall clock time and date at job start Sat Mar 6 2021 23:51:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46996 * 2 1 4 4 C 1.50706 * 109.47132 * 240.00404 * 2 1 3 5 5 C 1.38241 * 119.97066 * 120.01966 * 4 2 1 6 6 C 1.38298 * 120.10965 * 179.97438 * 5 4 2 7 7 C 1.38119 * 120.05290 * 359.68217 * 6 5 4 8 8 C 1.38758 * 119.94632 * 0.59036 * 7 6 5 9 9 O 1.35896 * 120.05717 * 179.70474 * 8 7 6 10 10 C 1.42901 * 117.00031 * 359.72520 * 9 8 7 11 11 C 1.50699 * 109.47147 * 180.02562 * 10 9 8 12 12 O 1.21279 * 120.00060 * 0.02562 * 11 10 9 13 13 N 1.34772 * 119.99955 * 179.97438 * 11 10 9 14 14 C 1.46503 * 119.99915 * 175.05361 * 13 11 10 15 15 C 1.50699 * 112.85232 * 291.21122 * 14 13 11 16 16 C 1.38237 * 119.99442 * 346.63121 * 15 14 13 17 17 C 1.38242 * 119.99627 * 179.80938 * 16 15 14 18 18 C 1.38233 * 119.99880 * 0.41848 * 17 16 15 19 19 C 1.38231 * 120.00207 * 359.81091 * 18 17 16 20 20 C 1.38236 * 120.00237 * 166.90213 * 15 14 13 21 21 C 1.53785 * 113.61158 * 159.90531 * 14 13 11 22 22 C 1.53784 * 87.08214 * 270.88184 * 21 14 13 23 23 H 1.08992 * 113.61768 * 220.02145 * 22 21 14 24 24 O 1.42900 * 113.68924 * 89.12723 * 22 21 14 25 25 C 1.53783 * 113.61352 * 62.40724 * 14 13 11 26 26 C 1.38169 * 119.96978 * 299.99373 * 4 2 1 27 27 H 0.96693 * 114.00138 * 299.99572 * 1 2 3 28 28 H 1.08996 * 109.47322 * 119.99806 * 2 1 3 29 29 H 1.48501 * 109.99929 * 300.00430 * 3 2 1 30 30 H 1.48501 * 109.99898 * 61.31716 * 3 2 1 31 31 H 1.07997 * 119.95247 * 359.97438 * 5 4 2 32 32 H 1.07999 * 119.96720 * 179.97438 * 6 5 4 33 33 H 1.08001 * 120.02680 * 180.32692 * 7 6 5 34 34 H 1.09007 * 109.47385 * 300.00230 * 10 9 8 35 35 H 1.08995 * 109.46827 * 60.00481 * 10 9 8 36 36 H 0.96999 * 120.00240 * 355.06023 * 13 11 10 37 37 H 1.07998 * 120.00771 * 359.97438 * 16 15 14 38 38 H 1.07996 * 120.00266 * 180.20255 * 17 16 15 39 39 H 1.07997 * 120.00370 * 179.78722 * 18 17 16 40 40 H 1.08001 * 120.00786 * 179.97438 * 19 18 17 41 41 H 1.07992 * 119.99697 * 359.97438 * 20 15 14 42 42 H 1.08992 * 113.61480 * 25.43310 * 21 14 13 43 43 H 1.09006 * 113.61304 * 156.33993 * 21 14 13 44 44 H 0.96699 * 114.00232 * 82.46537 * 24 22 21 45 45 H 1.08996 * 113.61360 * 203.65971 * 25 14 13 46 46 H 1.09001 * 113.61439 * 334.56616 * 25 14 13 47 47 H 1.07993 * 120.02595 * 0.04786 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7264 -0.0380 -2.1399 6 6 3.1894 -0.6872 -3.2698 7 6 2.8637 -2.0114 -3.4890 8 6 2.0611 -2.6869 -2.5807 9 8 1.7343 -3.9880 -2.7972 10 6 2.2470 -4.5969 -3.9841 11 6 1.7835 -6.0291 -4.0544 12 8 1.0828 -6.4836 -3.1751 13 7 2.1469 -6.8046 -5.0951 14 6 1.7880 -8.2249 -5.1106 15 6 2.5271 -9.0267 -4.0704 16 6 3.6191 -8.4793 -3.4232 17 6 4.2947 -9.2133 -2.4662 18 6 3.8835 -10.4977 -2.1627 19 6 2.7945 -11.0468 -2.8133 20 6 2.1165 -10.3114 -3.7675 21 6 1.8212 -8.8533 -6.5138 22 6 0.3508 -8.4256 -6.6543 23 1 -0.2747 -9.1684 -7.1491 24 8 0.1838 -7.1124 -7.1925 25 6 0.2710 -8.4769 -5.1194 26 6 1.5973 -2.0332 -1.4486 27 1 -0.3933 0.4416 0.7650 28 1 1.7923 -0.5138 0.8900 29 1 1.5613 2.4679 -1.2085 30 1 1.5878 2.4586 1.2242 31 1 2.9865 0.9960 -1.9677 32 1 3.8101 -0.1596 -3.9789 33 1 3.2299 -2.5195 -4.3689 34 1 1.8835 -4.0544 -4.8569 35 1 3.3364 -4.5677 -3.9658 36 1 2.6461 -6.4224 -5.8337 37 1 3.9429 -7.4774 -3.6632 38 1 5.1458 -8.7846 -1.9581 39 1 4.4134 -11.0725 -1.4175 40 1 2.4734 -12.0504 -2.5765 41 1 1.2658 -10.7404 -4.2760 42 1 2.4923 -8.3433 -7.2048 43 1 1.9625 -9.9341 -6.5049 44 1 0.2330 -7.0736 -8.1575 45 1 -0.0114 -9.4547 -4.7294 46 1 -0.3093 -7.6630 -4.6848 47 1 0.9758 -2.5578 -0.7381 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_4860298.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:51:51 Heat of formation + Delta-G solvation = -47.152826 kcal Electronic energy + Delta-G solvation = -31350.116642 eV Core-core repulsion = 27045.610565 eV Total energy + Delta-G solvation = -4304.506077 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.17074 -41.23922 -39.80373 -39.27449 -38.63286 -37.31989 -36.25496 -34.15820 -32.54568 -31.86251 -31.62898 -31.47559 -29.23295 -27.04604 -26.77971 -25.63992 -23.58975 -23.52595 -22.83584 -22.23611 -21.43149 -20.29454 -19.10018 -18.71418 -18.49524 -18.34783 -17.80003 -17.32914 -17.26707 -16.82564 -16.76025 -16.42658 -15.80288 -15.67356 -15.61215 -15.44657 -15.19499 -14.93957 -14.57977 -14.50122 -14.32843 -14.02373 -13.98366 -13.67894 -13.66161 -13.48326 -13.34701 -13.20539 -12.94572 -12.43686 -12.41437 -12.22201 -12.10975 -11.96567 -11.90370 -11.64733 -11.47639 -11.07520 -10.69699 -10.52313 -10.06935 -9.82788 -9.77479 -9.53959 -9.18867 -4.94164 0.26605 0.44996 0.47881 0.54427 1.27410 1.48395 1.60860 1.62386 1.98027 2.56737 2.69201 2.81357 2.98553 3.34235 3.35752 3.49103 3.54244 3.64683 3.75904 3.79246 3.84054 3.94544 3.98187 4.06927 4.09763 4.12058 4.22417 4.26304 4.28560 4.29329 4.53189 4.57119 4.58010 4.62174 4.65587 4.68030 4.76767 4.91193 5.03664 5.08729 5.09264 5.15063 5.29636 5.40111 5.41345 5.52618 5.59464 5.66748 5.69939 5.76998 6.11628 6.32206 6.46622 6.47429 6.56615 7.21836 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.687 3.313 4 C -0.033 4.033 5 C -0.152 4.152 6 C -0.072 4.072 7 C -0.207 4.207 8 C 0.130 3.870 9 O -0.287 6.287 10 C 0.041 3.959 11 C 0.520 3.480 12 O -0.500 6.500 13 N -0.699 5.699 14 C 0.202 3.798 15 C -0.075 4.075 16 C -0.105 4.105 17 C -0.117 4.117 18 C -0.121 4.121 19 C -0.116 4.116 20 C -0.113 4.113 21 C -0.161 4.161 22 C 0.079 3.921 23 H 0.075 0.925 24 O -0.546 6.546 25 C -0.131 4.131 26 C -0.119 4.119 27 H 0.381 0.619 28 H 0.079 0.921 29 H -0.255 1.255 30 H -0.261 1.261 31 H 0.130 0.870 32 H 0.132 0.868 33 H 0.130 0.870 34 H 0.094 0.906 35 H 0.093 0.907 36 H 0.404 0.596 37 H 0.114 0.886 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.124 0.876 41 H 0.123 0.877 42 H 0.083 0.917 43 H 0.107 0.893 44 H 0.381 0.619 45 H 0.106 0.894 46 H 0.092 0.908 47 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.353 -0.801 -4.428 6.993 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.034 4.034 5 C -0.170 4.170 6 C -0.090 4.090 7 C -0.225 4.225 8 C 0.084 3.916 9 O -0.199 6.199 10 C -0.038 4.038 11 C 0.304 3.696 12 O -0.372 6.372 13 N -0.352 5.352 14 C 0.115 3.885 15 C -0.077 4.077 16 C -0.123 4.123 17 C -0.135 4.135 18 C -0.139 4.139 19 C -0.134 4.134 20 C -0.131 4.131 21 C -0.199 4.199 22 C 0.019 3.981 23 H 0.093 0.907 24 O -0.351 6.351 25 C -0.169 4.169 26 C -0.138 4.138 27 H 0.228 0.772 28 H 0.097 0.903 29 H -0.179 1.179 30 H -0.187 1.187 31 H 0.147 0.853 32 H 0.150 0.850 33 H 0.148 0.852 34 H 0.112 0.888 35 H 0.111 0.889 36 H 0.239 0.761 37 H 0.132 0.868 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.142 0.858 41 H 0.141 0.859 42 H 0.101 0.899 43 H 0.125 0.875 44 H 0.228 0.772 45 H 0.124 0.876 46 H 0.111 0.889 47 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.538 -0.570 -3.565 5.799 hybrid contribution -0.588 -0.081 -0.592 0.838 sum 3.950 -0.650 -4.156 5.771 Atomic orbital electron populations 1.86602 1.17576 1.80217 1.49747 1.24864 0.84686 1.11133 0.98150 0.95018 0.91654 0.74263 0.80259 1.19032 0.96495 0.92917 0.94928 1.20864 1.01060 0.99861 0.95170 1.20870 0.97998 0.93588 0.96573 1.21283 1.03622 0.96611 1.01020 1.19013 0.94765 0.83052 0.94731 1.86170 1.70379 1.22473 1.40926 1.22449 0.99984 0.92393 0.88925 1.19924 0.80766 0.86731 0.82153 1.90787 1.34674 1.73913 1.37846 1.45250 1.58926 1.08328 1.22745 1.19803 0.94801 0.79957 0.93976 1.19751 0.95940 0.94438 0.97528 1.20876 0.95472 0.99445 0.96491 1.21157 0.99955 0.94743 0.97636 1.21193 0.97205 0.95642 0.99832 1.21136 0.95858 0.99970 0.96444 1.20896 0.99881 0.93813 0.98496 1.24042 0.98751 1.02271 0.94858 1.22739 0.94681 0.84984 0.95650 0.90745 1.86519 1.95078 1.27543 1.25952 1.23522 0.95199 1.04259 0.93919 1.20234 1.02462 0.94011 0.97110 0.77151 0.90294 1.17911 1.18660 0.85302 0.85001 0.85241 0.88797 0.88937 0.76059 0.86802 0.86073 0.85984 0.85812 0.85911 0.89881 0.87466 0.77197 0.87561 0.88947 0.84782 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.28 12.74 -35.23 -0.45 -1.73 16 2 C -0.08 -0.08 2.81 36.01 0.10 0.02 16 3 Si 0.69 -0.28 29.79 -169.99 -5.06 -5.34 16 4 C -0.03 -0.08 5.42 -104.64 -0.57 -0.65 16 5 C -0.15 -0.16 8.67 -39.56 -0.34 -0.50 16 6 C -0.07 -0.02 10.04 -39.60 -0.40 -0.42 16 7 C -0.21 -0.17 9.04 -39.43 -0.36 -0.53 16 8 C 0.13 0.43 6.69 -39.21 -0.26 0.17 16 9 O -0.29 -1.25 9.67 -39.32 -0.38 -1.63 16 10 C 0.04 0.02 5.22 36.00 0.19 0.21 16 11 C 0.52 1.39 6.40 -10.99 -0.07 1.32 16 12 O -0.50 -3.69 14.91 -14.35 -0.21 -3.91 16 13 N -0.70 0.17 3.76 -47.92 -0.18 -0.01 16 14 C 0.20 0.06 0.94 -132.15 -0.12 -0.06 16 15 C -0.08 -0.14 4.89 -104.62 -0.51 -0.65 16 16 C -0.10 -0.24 8.98 -39.58 -0.36 -0.59 16 17 C -0.12 -0.23 10.05 -39.58 -0.40 -0.63 16 18 C -0.12 -0.19 10.05 -39.59 -0.40 -0.59 16 19 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 20 C -0.11 -0.14 8.71 -39.58 -0.34 -0.49 16 21 C -0.16 0.37 7.13 -25.92 -0.18 0.18 16 22 C 0.08 -0.11 5.27 -25.91 -0.14 -0.24 16 23 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 24 O -0.55 0.48 13.09 -35.23 -0.46 0.02 16 25 C -0.13 -0.15 6.56 -25.91 -0.17 -0.32 16 26 C -0.12 -0.47 9.55 -39.43 -0.38 -0.84 16 27 H 0.38 -0.68 8.74 45.56 0.40 -0.28 16 28 H 0.08 -0.05 7.96 -51.93 -0.41 -0.46 16 29 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 30 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 31 H 0.13 -0.13 4.87 -52.49 -0.26 -0.38 16 32 H 0.13 -0.31 8.06 -52.49 -0.42 -0.74 16 33 H 0.13 -0.25 6.30 -52.49 -0.33 -0.58 16 34 H 0.09 -0.15 7.68 -51.92 -0.40 -0.55 16 35 H 0.09 -0.22 7.65 -51.93 -0.40 -0.61 16 36 H 0.40 -1.27 8.69 -40.82 -0.35 -1.63 16 37 H 0.11 0.15 6.73 -52.49 -0.35 -0.21 16 38 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 39 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 40 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 41 H 0.12 -0.10 6.55 -52.49 -0.34 -0.44 16 42 H 0.08 -0.28 8.10 -51.93 -0.42 -0.70 16 43 H 0.11 -0.32 7.79 -51.93 -0.40 -0.72 16 44 H 0.38 -1.90 9.12 45.56 0.42 -1.49 16 45 H 0.11 -0.01 6.22 -51.93 -0.32 -0.33 16 46 H 0.09 0.42 6.95 -51.93 -0.36 0.05 16 47 H 0.13 0.59 8.06 -52.49 -0.42 0.17 16 LS Contribution 386.41 15.07 5.82 5.82 Total: 0.00 -11.75 386.41 -11.31 -23.06 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -5.28 Total: -11.13 kcal Atomic # 6 Polarization: -0.04 SS G_CDS: -5.10 Total: -5.15 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.18 Total: -0.01 kcal Atomic # 8 Polarization: -5.74 SS G_CDS: -1.50 Total: -7.25 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: -5.06 Total: -5.34 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -11.75 -11.31 -23.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_4860298.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.093 kcal (2) G-P(sol) polarization free energy of solvation -11.754 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.060 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.153 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds