Wall clock time and date at job start Sat Mar 6 2021 23:51:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35897 * 116.99768 * 2 1 4 4 C 1.38621 * 120.02400 * 179.97438 * 3 2 1 5 5 C 1.38652 * 119.88760 * 180.29303 * 4 3 2 6 6 O 1.35895 * 120.02538 * 179.69939 * 5 4 3 7 7 C 1.42905 * 117.00239 * 0.02562 * 6 5 4 8 8 C 1.50704 * 109.47490 * 180.02562 * 7 6 5 9 9 O 1.21280 * 119.99781 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99752 * 180.02562 * 8 7 6 11 11 C 1.46505 * 119.99467 * 174.78292 * 10 8 7 12 12 C 1.50705 * 112.84620 * 291.81902 * 11 10 8 13 13 C 1.38229 * 119.99488 * 165.26695 * 12 11 10 14 14 C 1.38243 * 119.99877 * 179.79063 * 13 12 11 15 15 C 1.38235 * 119.99403 * 0.43879 * 14 13 12 16 16 C 1.38235 * 120.00611 * 359.81262 * 15 14 13 17 17 C 1.38233 * 119.99645 * 359.97438 * 16 15 14 18 18 C 1.53785 * 113.61067 * 160.51828 * 11 10 8 19 19 C 1.53780 * 87.07648 * 270.87895 * 18 11 10 20 20 H 1.09007 * 113.61256 * 220.01952 * 19 18 11 21 21 O 1.42900 * 113.69126 * 89.13082 * 19 18 11 22 22 C 1.53779 * 87.08683 * 334.56839 * 19 18 11 23 23 C 1.38748 * 119.94897 * 359.45014 * 5 4 3 24 24 C 1.50698 * 119.97873 * 180.27151 * 23 5 4 25 25 O 1.42902 * 109.46703 * 75.27431 * 24 23 5 26 26 Si 1.86298 * 109.47621 * 195.27688 * 24 23 5 27 27 C 1.38201 * 120.05148 * 0.55393 * 23 5 4 28 28 C 1.38155 * 120.10951 * 359.71649 * 27 23 5 29 29 H 1.09005 * 109.47330 * 300.00963 * 1 2 3 30 30 H 1.09000 * 109.46948 * 60.00314 * 1 2 3 31 31 H 1.08997 * 109.47339 * 179.97438 * 1 2 3 32 32 H 1.08003 * 120.05172 * 0.02562 * 4 3 2 33 33 H 1.09008 * 109.46712 * 299.99697 * 7 6 5 34 34 H 1.08990 * 109.47017 * 59.99567 * 7 6 5 35 35 H 0.96994 * 120.00174 * 354.77129 * 10 8 7 36 36 H 1.08001 * 120.00559 * 0.02562 * 13 12 11 37 37 H 1.07995 * 120.00042 * 180.27456 * 14 13 12 38 38 H 1.08001 * 119.99677 * 179.83830 * 15 14 13 39 39 H 1.07994 * 120.00197 * 180.02562 * 16 15 14 40 40 H 1.07999 * 120.00275 * 180.02562 * 17 16 15 41 41 H 1.08994 * 113.61565 * 25.42766 * 18 11 10 42 42 H 1.09000 * 113.60820 * 156.33527 * 18 11 10 43 43 H 0.96706 * 113.99787 * 82.45632 * 21 19 18 44 44 H 1.08996 * 113.61677 * 270.88714 * 22 19 18 45 45 H 1.08996 * 113.68995 * 139.98821 * 22 19 18 46 46 H 1.08998 * 109.47182 * 315.28146 * 24 23 5 47 47 H 0.96706 * 113.99997 * 60.00916 * 25 24 23 48 48 H 1.48504 * 109.99615 * 58.68161 * 26 24 23 49 49 H 1.48498 * 109.99991 * 180.02562 * 26 24 23 50 50 H 1.08002 * 119.94760 * 179.74594 * 27 23 5 51 51 H 1.08000 * 119.97146 * 179.97438 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4302 1.2841 0.0005 5 6 4.0566 2.5210 0.0067 6 8 5.4135 2.5960 0.0134 7 6 6.1316 1.3604 0.0132 8 6 7.6125 1.6400 0.0217 9 8 8.0134 2.7846 0.0270 10 7 8.4911 0.6181 0.0225 11 6 9.9273 0.8869 -0.0846 12 6 10.3221 1.4291 -1.4342 13 6 11.5613 2.0165 -1.6074 14 6 11.9252 2.5100 -2.8464 15 6 11.0462 2.4242 -3.9098 16 6 9.8048 1.8415 -3.7353 17 6 9.4427 1.3441 -2.4975 18 6 10.8094 -0.2777 0.3955 19 6 10.7419 0.3524 1.7967 20 1 11.6864 0.3122 2.3395 21 8 9.6337 -0.1004 2.5770 22 6 10.4920 1.6973 1.0941 23 6 3.2972 3.6821 0.0007 24 6 3.9774 5.0268 0.0012 25 8 4.5041 5.2946 -1.2999 26 14 2.7437 6.3468 0.4555 27 6 1.9172 3.6065 0.0003 28 6 1.2906 2.3753 -0.0002 29 1 -0.3634 0.5140 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 4.0196 0.3791 0.0005 33 1 5.8657 0.7855 0.9003 34 1 5.8742 0.7908 -0.8797 35 1 8.1727 -0.2953 0.0941 36 1 12.2468 2.0865 -0.7758 37 1 12.8951 2.9650 -2.9828 38 1 11.3294 2.8121 -4.8771 39 1 9.1183 1.7742 -4.5662 40 1 8.4731 0.8884 -2.3611 41 1 10.3220 -1.2504 0.3302 42 1 11.8100 -0.2745 -0.0369 43 1 9.7850 -0.9459 3.0214 44 1 11.4057 2.2402 0.8527 45 1 9.7486 2.3199 1.5918 46 1 4.7896 5.0229 0.7282 47 1 3.8358 5.3132 -1.9986 48 1 2.1652 6.0624 1.7933 49 1 3.4022 7.6779 0.4589 50 1 1.3277 4.5114 -0.0002 51 1 0.2121 2.3188 -0.0001 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_4974312.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:51:58 Heat of formation + Delta-G solvation = -86.430151 kcal Electronic energy + Delta-G solvation = -36588.476974 eV Core-core repulsion = 31808.047894 eV Total energy + Delta-G solvation = -4780.429080 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -42.24880 -41.70834 -40.35926 -39.59376 -39.22188 -38.26286 -36.94225 -36.25133 -34.26514 -32.30873 -31.89391 -31.69260 -31.37080 -29.47295 -28.35848 -27.01165 -26.13501 -25.74395 -23.86962 -23.48982 -22.58026 -22.47714 -21.72118 -20.37440 -19.91321 -18.78189 -18.63815 -18.12028 -17.85176 -17.71213 -17.48729 -17.23834 -16.83564 -16.66570 -16.53039 -16.44966 -15.97995 -15.74082 -15.66157 -15.45328 -15.17094 -15.13120 -14.85316 -14.54758 -14.47887 -14.38691 -14.04578 -13.88609 -13.66698 -13.48151 -13.33886 -13.26026 -13.16937 -12.98247 -12.51228 -12.36874 -12.28579 -12.27328 -12.03643 -11.96462 -11.88683 -11.64623 -11.50186 -10.99917 -10.91802 -10.37724 -10.15002 -9.88070 -9.72478 -9.62418 -9.12125 -5.06016 0.18534 0.28124 0.35713 0.43663 1.29419 1.37668 1.43326 1.62876 1.96672 2.23026 2.50713 2.55658 2.74363 3.09320 3.39101 3.47228 3.57990 3.59000 3.66225 3.71256 3.78819 3.80455 3.87030 3.96448 4.02462 4.06378 4.06503 4.14189 4.20067 4.32542 4.33630 4.38006 4.43011 4.45016 4.55988 4.58224 4.59165 4.65149 4.78868 4.79157 4.82373 4.93924 4.95739 5.00349 5.01841 5.09617 5.21392 5.25653 5.34366 5.45953 5.50475 5.56624 5.68208 6.04261 6.10104 6.34564 6.42003 6.83985 6.88608 7.11804 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.164 3.836 4 C -0.255 4.255 5 C 0.172 3.828 6 O -0.304 6.304 7 C 0.037 3.963 8 C 0.517 3.483 9 O -0.553 6.553 10 N -0.682 5.682 11 C 0.193 3.807 12 C -0.085 4.085 13 C -0.123 4.123 14 C -0.125 4.125 15 C -0.134 4.134 16 C -0.132 4.132 17 C -0.123 4.123 18 C -0.143 4.143 19 C 0.088 3.912 20 H 0.093 0.907 21 O -0.565 6.565 22 C -0.143 4.143 23 C -0.203 4.203 24 C -0.070 4.070 25 O -0.558 6.558 26 Si 0.798 3.202 27 C -0.031 4.031 28 C -0.236 4.236 29 H 0.068 0.932 30 H 0.072 0.928 31 H 0.116 0.884 32 H 0.149 0.851 33 H 0.115 0.885 34 H 0.118 0.882 35 H 0.419 0.581 36 H 0.141 0.859 37 H 0.142 0.858 38 H 0.137 0.863 39 H 0.130 0.870 40 H 0.115 0.885 41 H 0.100 0.900 42 H 0.119 0.881 43 H 0.399 0.601 44 H 0.113 0.887 45 H 0.050 0.950 46 H 0.077 0.923 47 H 0.390 0.610 48 H -0.279 1.279 49 H -0.303 1.303 50 H 0.168 0.832 51 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.630 -7.798 -1.097 8.672 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.118 3.882 4 C -0.274 4.274 5 C 0.126 3.874 6 O -0.216 6.216 7 C -0.041 4.041 8 C 0.303 3.697 9 O -0.429 6.429 10 N -0.336 5.336 11 C 0.106 3.894 12 C -0.086 4.086 13 C -0.141 4.141 14 C -0.143 4.143 15 C -0.151 4.151 16 C -0.150 4.150 17 C -0.141 4.141 18 C -0.181 4.181 19 C 0.029 3.971 20 H 0.111 0.889 21 O -0.373 6.373 22 C -0.181 4.181 23 C -0.204 4.204 24 C -0.178 4.178 25 O -0.365 6.365 26 Si 0.702 3.298 27 C -0.048 4.048 28 C -0.255 4.255 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.134 0.866 32 H 0.166 0.834 33 H 0.133 0.867 34 H 0.136 0.864 35 H 0.257 0.743 36 H 0.158 0.842 37 H 0.160 0.840 38 H 0.155 0.845 39 H 0.148 0.852 40 H 0.133 0.867 41 H 0.118 0.882 42 H 0.137 0.863 43 H 0.249 0.751 44 H 0.131 0.869 45 H 0.069 0.931 46 H 0.095 0.905 47 H 0.239 0.761 48 H -0.206 1.206 49 H -0.232 1.232 50 H 0.185 0.815 51 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -3.070 -5.851 -0.420 6.620 hybrid contribution 0.514 -1.192 0.387 1.355 sum -2.556 -7.043 -0.033 7.492 Atomic orbital electron populations 1.23418 0.75883 1.05723 1.02821 1.86057 1.23877 1.26552 1.87926 1.18864 0.91495 0.85156 0.92694 1.20529 0.93622 0.97234 1.16008 1.18662 0.81675 0.93405 0.93701 1.86224 1.15718 1.31493 1.88146 1.22681 0.88856 0.86500 1.06080 1.20317 0.88155 0.85322 0.75923 1.90772 1.80464 1.22919 1.48789 1.45145 1.04594 1.09543 1.74331 1.19987 0.80571 0.98278 0.90592 1.19997 0.94869 0.99129 0.94644 1.21188 0.96206 0.98452 0.98231 1.21452 1.00553 0.99467 0.92833 1.21463 0.94152 0.99457 1.00073 1.21392 0.97343 0.98693 0.97609 1.21037 0.99265 1.00561 0.93224 1.23983 1.00722 0.97220 0.96169 1.22675 0.90016 0.93703 0.90746 0.88893 1.86479 1.40070 1.44053 1.66738 1.23590 1.01921 0.96927 0.95686 1.19752 0.93892 0.93933 1.12855 1.25172 1.04377 0.99848 0.88409 1.86550 1.39272 1.93715 1.16981 0.94137 0.80226 0.72948 0.82491 1.20870 0.91409 0.98687 0.93839 1.21453 1.01834 0.91064 1.11113 0.91295 0.90982 0.86619 0.83367 0.86711 0.86440 0.74330 0.84165 0.83993 0.84521 0.85183 0.86711 0.88162 0.86277 0.75082 0.86930 0.93074 0.90498 0.76062 1.20553 1.23166 0.81533 0.81930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.53 10.49 -92.40 -0.97 -1.50 16 3 C 0.16 0.46 6.68 22.49 0.15 0.61 16 4 C -0.25 -1.14 8.97 22.46 0.20 -0.93 16 5 C 0.17 1.42 6.66 22.49 0.15 1.57 16 6 O -0.30 -3.65 8.99 -73.34 -0.66 -4.31 16 7 C 0.04 0.15 5.22 71.24 0.37 0.52 16 8 C 0.52 4.57 6.43 87.66 0.56 5.14 16 9 O -0.55 -10.92 14.94 16.01 0.24 -10.68 16 10 N -0.68 -1.16 3.76 -423.90 -1.59 -2.76 16 11 C 0.19 0.47 0.94 3.39 0.00 0.47 16 12 C -0.09 -0.51 4.85 -19.87 -0.10 -0.61 16 13 C -0.12 -0.53 8.79 22.27 0.20 -0.34 16 14 C -0.13 -0.52 10.05 22.27 0.22 -0.30 16 15 C -0.13 -0.70 10.05 22.27 0.22 -0.47 16 16 C -0.13 -0.89 10.05 22.27 0.22 -0.67 16 17 C -0.12 -0.92 8.97 22.27 0.20 -0.72 16 18 C -0.14 0.67 7.13 31.12 0.22 0.89 16 19 C 0.09 -0.21 5.27 31.12 0.16 -0.05 16 20 H 0.09 -0.56 8.14 -2.38 -0.02 -0.58 16 21 O -0.57 0.80 13.09 -148.98 -1.95 -1.15 16 22 C -0.14 -0.65 6.56 31.12 0.20 -0.45 16 23 C -0.20 -1.24 5.27 -19.75 -0.10 -1.35 16 24 C -0.07 -0.57 2.38 71.24 0.17 -0.40 16 25 O -0.56 -5.42 12.88 -148.98 -1.92 -7.34 16 26 Si 0.80 1.55 29.91 68.60 2.05 3.60 16 27 C -0.03 0.00 8.65 22.24 0.19 0.20 16 28 C -0.24 0.19 9.04 22.38 0.20 0.39 16 29 H 0.07 -0.55 7.66 -2.38 -0.02 -0.57 16 30 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 31 H 0.12 -1.04 8.14 -2.39 -0.02 -1.06 16 32 H 0.15 0.11 6.30 -2.91 -0.02 0.09 16 33 H 0.12 -0.11 7.66 -2.38 -0.02 -0.13 16 34 H 0.12 -0.19 7.66 -2.39 -0.02 -0.21 16 35 H 0.42 -2.07 8.68 -92.71 -0.80 -2.88 16 36 H 0.14 -0.05 6.45 -2.91 -0.02 -0.07 16 37 H 0.14 -0.06 8.06 -2.91 -0.02 -0.09 16 38 H 0.14 0.16 8.06 -2.91 -0.02 0.13 16 39 H 0.13 0.46 8.06 -2.91 -0.02 0.43 16 40 H 0.11 0.67 6.78 -2.91 -0.02 0.65 16 41 H 0.10 -0.79 8.10 -2.39 -0.02 -0.80 16 42 H 0.12 -0.79 7.84 -2.39 -0.02 -0.81 16 43 H 0.40 -4.15 9.12 -74.05 -0.68 -4.83 16 44 H 0.11 0.24 6.15 -2.39 -0.01 0.22 16 45 H 0.05 0.67 7.00 -2.39 -0.02 0.65 16 46 H 0.08 1.11 7.82 -2.39 -0.02 1.10 16 47 H 0.39 -0.20 8.70 -74.05 -0.64 -0.84 16 48 H -0.28 -1.52 7.11 99.48 0.71 -0.82 16 49 H -0.30 -3.02 7.11 99.48 0.71 -2.31 16 50 H 0.17 -1.15 5.12 -2.91 -0.01 -1.16 16 51 H 0.16 -1.11 6.29 -2.91 -0.02 -1.13 16 Total: 0.00 -33.95 415.50 -1.30 -35.25 By element: Atomic # 1 Polarization: -14.56 SS G_CDS: -1.07 Total: -15.63 kcal Atomic # 6 Polarization: -0.04 SS G_CDS: 4.57 Total: 4.53 kcal Atomic # 7 Polarization: -1.16 SS G_CDS: -1.59 Total: -2.76 kcal Atomic # 8 Polarization: -19.73 SS G_CDS: -5.26 Total: -24.99 kcal Atomic # 14 Polarization: 1.55 SS G_CDS: 2.05 Total: 3.60 kcal Total: -33.95 -1.30 -35.25 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_4974312.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.185 kcal (2) G-P(sol) polarization free energy of solvation -33.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.131 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.245 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds