Wall clock time and date at job start Sat Mar 6 2021 23:52:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37638 * 125.67487 * 2 1 4 4 C 1.46669 * 126.22812 * 0.02562 * 3 2 1 5 5 O 1.21692 * 119.99843 * 187.45533 * 4 3 2 6 6 N 1.34769 * 119.99822 * 7.45254 * 4 3 2 7 7 C 1.46506 * 119.99980 * 184.39189 * 6 4 3 8 8 C 1.50701 * 112.84609 * 65.36893 * 7 6 4 9 9 C 1.38240 * 119.99684 * 194.92405 * 8 7 6 10 10 C 1.38238 * 119.99772 * 179.79074 * 9 8 7 11 11 C 1.38238 * 119.99859 * 0.43576 * 10 9 8 12 12 C 1.38227 * 120.00129 * 359.81763 * 11 10 9 13 13 C 1.38237 * 120.00284 * 15.19588 * 8 7 6 14 14 C 1.53782 * 113.61562 * 294.17427 * 7 6 4 15 15 C 1.53782 * 87.07856 * 270.88120 * 14 7 6 16 16 H 1.09001 * 113.61644 * 220.01877 * 15 14 7 17 17 O 1.42897 * 113.61324 * 89.11805 * 15 14 7 18 18 C 1.53783 * 113.61610 * 196.56437 * 7 6 4 19 19 C 1.37890 * 107.54421 * 180.29265 * 3 2 1 20 20 C 1.39878 * 107.09493 * 359.74272 * 19 3 2 21 21 Br 1.89094 * 126.07322 * 179.97438 * 20 19 3 22 22 C 1.35498 * 107.85128 * 0.02562 * 20 19 3 23 23 C 1.50704 * 125.57141 * 179.97438 * 22 20 19 24 24 O 1.42899 * 109.47446 * 210.02503 * 23 22 20 25 25 Si 1.86295 * 109.47145 * 330.02768 * 23 22 20 26 26 H 1.08991 * 109.47326 * 277.63725 * 1 2 3 27 27 H 1.08995 * 109.47302 * 37.64031 * 1 2 3 28 28 H 1.09000 * 109.47203 * 157.63557 * 1 2 3 29 29 H 0.96999 * 120.00793 * 4.39360 * 6 4 3 30 30 H 1.07997 * 120.00060 * 0.02562 * 9 8 7 31 31 H 1.07999 * 119.99741 * 180.27846 * 10 9 8 32 32 H 1.07999 * 119.99600 * 179.83638 * 11 10 9 33 33 H 1.07999 * 120.00211 * 179.97438 * 12 11 10 34 34 H 1.08000 * 119.99714 * 359.97438 * 13 8 7 35 35 H 1.09003 * 113.61490 * 25.42958 * 14 7 6 36 36 H 1.08996 * 113.61504 * 156.25063 * 14 7 6 37 37 H 0.96707 * 114.00110 * 180.02562 * 17 15 14 38 38 H 1.09000 * 113.60997 * 203.66733 * 18 7 6 39 39 H 1.08997 * 113.61152 * 334.56517 * 18 7 6 40 40 H 1.08004 * 126.45010 * 179.72665 * 19 3 2 41 41 H 1.08998 * 109.46920 * 90.02594 * 23 22 20 42 42 H 0.96698 * 113.99859 * 59.99681 * 24 23 22 43 43 H 1.48500 * 110.00169 * 179.97438 * 25 23 22 44 44 H 1.48504 * 110.00090 * 301.31491 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 0.0005 5 8 2.6164 3.4152 -0.1363 6 7 0.5028 2.7932 0.1525 7 6 0.0349 4.1782 0.0569 8 6 0.2155 4.7631 -1.3202 9 6 0.1195 6.1292 -1.5089 10 6 0.2894 6.6661 -2.7714 11 6 0.5463 5.8362 -3.8466 12 6 0.6370 4.4697 -3.6588 13 6 0.4714 3.9331 -2.3956 14 6 0.5575 5.0842 1.1843 15 6 -0.6834 4.6644 1.9898 16 1 -1.1342 5.4806 2.5544 17 8 -0.4845 3.4878 2.7759 18 6 -1.3721 4.3947 0.6385 19 6 3.5781 0.6890 -0.0067 20 6 3.5529 -0.7095 -0.0048 21 35 5.0609 -1.8504 -0.0124 22 6 2.2559 -1.1015 0.0023 23 6 1.7713 -2.5286 0.0061 24 8 0.5101 -2.6052 -0.6614 25 14 3.0078 -3.6065 -0.8769 26 1 -0.3633 0.1366 1.0185 27 1 -0.3633 0.8137 -0.6276 28 1 -0.3633 -0.9504 -0.3910 29 1 -0.1298 2.0785 0.3251 30 1 -0.0844 6.7773 -0.6694 31 1 0.2189 7.7338 -2.9180 32 1 0.6764 6.2555 -4.8333 33 1 0.8373 3.8213 -4.4989 34 1 0.5424 2.8655 -2.2488 35 1 1.4966 4.7423 1.6194 36 1 0.5725 6.1422 0.9227 37 1 -1.2617 3.2185 3.2846 38 1 -1.8849 5.2647 0.2284 39 1 -1.9897 3.4966 0.6331 40 1 4.4583 1.3150 -0.0126 41 1 1.6594 -2.8715 1.0347 42 1 0.5348 -2.3147 -1.5833 43 1 2.5419 -5.0166 -0.8795 44 1 3.1931 -3.1298 -2.2711 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_5000100.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:02 Heat of formation + Delta-G solvation = 15.406546 kcal Electronic energy + Delta-G solvation = -31503.116819 eV Core-core repulsion = 27242.987939 eV Total energy + Delta-G solvation = -4260.128880 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.057 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -43.08166 -41.96230 -39.70044 -39.23209 -38.06013 -36.36223 -35.22283 -33.81939 -32.43702 -31.87460 -31.69418 -31.08531 -27.73546 -27.22553 -26.97969 -25.61545 -23.72853 -23.32443 -22.32778 -21.68964 -21.01938 -20.31866 -18.99099 -18.68686 -18.38429 -17.87352 -17.26852 -17.07039 -16.64222 -16.42600 -16.12984 -15.73586 -15.61016 -15.51051 -15.42798 -15.22826 -14.95196 -14.63303 -14.50077 -14.29626 -14.13410 -13.97639 -13.80467 -13.63037 -13.33517 -13.23767 -12.94749 -12.80492 -12.46643 -12.37042 -12.27151 -12.05781 -11.97943 -11.68409 -11.58317 -11.17786 -11.01610 -10.85837 -10.23216 -9.91610 -9.88448 -9.63182 -9.38553 -4.68540 0.09230 0.30833 0.35661 0.43206 0.87117 1.20006 1.44985 1.60102 1.87818 1.96659 2.11288 2.73836 2.99418 3.09171 3.20429 3.39135 3.45969 3.57414 3.60947 3.65554 3.78542 3.98478 4.00080 4.05462 4.15808 4.20115 4.30404 4.34155 4.48039 4.53362 4.56071 4.58160 4.62360 4.65857 4.77146 4.79210 4.93364 4.95784 5.00828 5.09453 5.16424 5.30572 5.44873 5.50542 5.56776 5.66458 5.73607 6.03745 6.19039 6.30917 6.87675 7.00639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.394 5.394 3 C -0.055 4.055 4 C 0.594 3.406 5 O -0.552 6.552 6 N -0.691 5.691 7 C 0.186 3.814 8 C -0.080 4.080 9 C -0.120 4.120 10 C -0.123 4.123 11 C -0.133 4.133 12 C -0.132 4.132 13 C -0.122 4.122 14 C -0.140 4.140 15 C 0.087 3.913 16 H 0.096 0.904 17 O -0.566 6.566 18 C -0.147 4.147 19 C -0.087 4.087 20 C -0.193 4.193 21 Br 0.086 6.914 22 C 0.070 3.930 23 C -0.029 4.029 24 O -0.533 6.533 25 Si 0.615 3.385 26 H 0.103 0.897 27 H 0.095 0.905 28 H 0.139 0.861 29 H 0.410 0.590 30 H 0.144 0.856 31 H 0.143 0.857 32 H 0.136 0.864 33 H 0.127 0.873 34 H 0.107 0.893 35 H 0.053 0.947 36 H 0.117 0.883 37 H 0.398 0.602 38 H 0.122 0.878 39 H 0.096 0.904 40 H 0.156 0.844 41 H 0.148 0.852 42 H 0.389 0.611 43 H -0.263 1.263 44 H -0.282 1.282 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.918 0.730 2.090 7.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 N -0.069 5.069 3 C -0.168 4.168 4 C 0.382 3.618 5 O -0.429 6.429 6 N -0.346 5.346 7 C 0.099 3.901 8 C -0.081 4.081 9 C -0.138 4.138 10 C -0.141 4.141 11 C -0.151 4.151 12 C -0.150 4.150 13 C -0.141 4.141 14 C -0.178 4.178 15 C 0.028 3.972 16 H 0.114 0.886 17 O -0.374 6.374 18 C -0.185 4.185 19 C -0.114 4.114 20 C -0.279 4.279 21 Br 0.169 6.831 22 C -0.053 4.053 23 C -0.141 4.141 24 O -0.341 6.341 25 Si 0.517 3.483 26 H 0.121 0.879 27 H 0.114 0.886 28 H 0.156 0.844 29 H 0.252 0.748 30 H 0.161 0.839 31 H 0.161 0.839 32 H 0.154 0.846 33 H 0.145 0.855 34 H 0.125 0.875 35 H 0.072 0.928 36 H 0.135 0.865 37 H 0.249 0.751 38 H 0.140 0.860 39 H 0.114 0.886 40 H 0.173 0.827 41 H 0.166 0.834 42 H 0.239 0.761 43 H -0.188 1.188 44 H -0.208 1.208 Dipole moment (debyes) X Y Z Total from point charges -5.711 0.280 1.631 5.946 hybrid contribution -1.455 0.272 -0.675 1.626 sum -7.166 0.552 0.956 7.251 Atomic orbital electron populations 1.23167 0.73992 1.08391 1.05881 1.44045 1.07675 1.03484 1.51686 1.20442 0.90903 0.86733 1.18723 1.16966 0.82745 0.86066 0.76033 1.90861 1.54562 1.46742 1.50749 1.45801 1.07430 1.08995 1.72383 1.20086 0.97448 0.81749 0.90785 1.19912 0.99815 0.94195 0.94201 1.21193 1.00446 0.93958 0.98195 1.21460 0.99056 1.00960 0.92593 1.21446 0.99905 0.93588 1.00118 1.21343 1.00214 0.96156 0.97277 1.20949 1.00629 0.99375 0.93117 1.23599 0.98479 1.00638 0.95120 1.22751 0.95423 0.88404 0.90642 0.88602 1.86489 1.42895 1.44826 1.63219 1.24075 0.93239 1.05035 0.96118 1.21206 0.95924 0.92597 1.01641 1.20641 0.91230 0.94134 1.21874 1.96300 1.33593 1.55787 1.97402 1.20921 0.89108 0.90520 1.04748 1.24567 0.92913 0.91775 1.04804 1.86490 1.29144 1.88375 1.30068 0.92555 0.93120 0.78485 0.84103 0.87898 0.88640 0.84365 0.74800 0.83865 0.83897 0.84606 0.85515 0.87510 0.92778 0.86456 0.75138 0.85969 0.88558 0.82683 0.83442 0.76100 1.18814 1.20765 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.18 9.21 127.77 1.18 1.00 16 2 N -0.39 -0.02 3.16 -519.62 -1.64 -1.67 16 3 C -0.06 -0.32 6.88 40.35 0.28 -0.04 16 4 C 0.59 4.77 6.16 86.45 0.53 5.30 16 5 O -0.55 -8.76 15.36 -4.32 -0.07 -8.82 16 6 N -0.69 -0.83 3.47 -427.84 -1.48 -2.31 16 7 C 0.19 0.11 0.93 3.38 0.00 0.11 16 8 C -0.08 -0.30 4.71 -19.86 -0.09 -0.39 16 9 C -0.12 -0.21 8.80 22.27 0.20 -0.02 16 10 C -0.12 -0.23 10.05 22.27 0.22 -0.01 16 11 C -0.13 -0.43 10.05 22.27 0.22 -0.21 16 12 C -0.13 -0.66 10.05 22.27 0.22 -0.44 16 13 C -0.12 -0.71 8.82 22.27 0.20 -0.51 16 14 C -0.14 -0.25 6.60 31.12 0.21 -0.05 16 15 C 0.09 -0.39 5.28 31.21 0.16 -0.23 16 16 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 17 O -0.57 1.74 13.09 -148.98 -1.95 -0.21 16 18 C -0.15 0.95 7.14 31.21 0.22 1.17 16 19 C -0.09 -0.59 10.64 22.58 0.24 -0.35 16 20 C -0.19 -0.70 6.16 22.03 0.14 -0.56 16 21 Br 0.09 0.08 28.24 -20.37 -0.58 -0.49 16 22 C 0.07 0.08 6.15 41.34 0.25 0.33 16 23 C -0.03 0.04 2.99 71.24 0.21 0.26 16 24 O -0.53 1.62 9.86 -148.98 -1.47 0.15 16 25 Si 0.62 1.39 27.10 68.60 1.86 3.25 16 26 H 0.10 -0.99 7.99 -2.39 -0.02 -1.01 16 27 H 0.10 -0.85 6.23 -2.39 -0.01 -0.87 16 28 H 0.14 -1.24 4.84 -2.39 -0.01 -1.25 16 29 H 0.41 -1.59 4.65 -92.71 -0.43 -2.02 16 30 H 0.14 -0.46 6.44 -2.91 -0.02 -0.48 16 31 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 32 H 0.14 -0.07 8.06 -2.91 -0.02 -0.09 16 33 H 0.13 0.30 8.06 -2.91 -0.02 0.27 16 34 H 0.11 0.56 6.72 -2.91 -0.02 0.54 16 35 H 0.05 0.52 7.26 -2.39 -0.02 0.51 16 36 H 0.12 -0.14 6.14 -2.39 -0.01 -0.16 16 37 H 0.40 -4.75 9.12 -74.05 -0.68 -5.43 16 38 H 0.12 -1.07 7.85 -2.39 -0.02 -1.08 16 39 H 0.10 -0.90 8.09 -2.39 -0.02 -0.92 16 40 H 0.16 1.13 8.06 -2.91 -0.02 1.11 16 41 H 0.15 -0.63 7.96 -2.39 -0.02 -0.65 16 42 H 0.39 -2.85 8.50 -74.06 -0.63 -3.48 16 43 H -0.26 -2.00 7.11 99.48 0.71 -1.29 16 44 H -0.28 -2.25 7.11 99.48 0.71 -1.54 16 Total: 0.00 -22.26 367.27 -1.54 -23.80 By element: Atomic # 1 Polarization: -18.46 SS G_CDS: -0.61 Total: -19.06 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: 4.40 Total: 5.37 kcal Atomic # 7 Polarization: -0.85 SS G_CDS: -3.13 Total: -3.98 kcal Atomic # 8 Polarization: -5.40 SS G_CDS: -3.49 Total: -8.88 kcal Atomic # 14 Polarization: 1.39 SS G_CDS: 1.86 Total: 3.25 kcal Atomic # 35 Polarization: 0.08 SS G_CDS: -0.58 Total: -0.49 kcal Total: -22.26 -1.54 -23.80 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_5000100.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.202 kcal (2) G-P(sol) polarization free energy of solvation -22.256 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.946 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.795 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds