Wall clock time and date at job start Sat Mar 6 2021 23:52:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35987 * 116.99794 * 2 1 4 4 C 1.39152 * 120.07513 * 180.02562 * 3 2 1 5 5 O 1.36000 * 120.06931 * 359.97438 * 4 3 2 6 6 C 1.42904 * 116.99837 * 180.02562 * 5 4 3 7 7 C 1.50699 * 109.46905 * 179.97438 * 6 5 4 8 8 O 1.21279 * 120.00352 * 359.97438 * 7 6 5 9 9 N 1.34773 * 119.99766 * 179.97438 * 7 6 5 10 10 C 1.46502 * 120.00198 * 175.26486 * 9 7 6 11 11 C 1.50701 * 112.84690 * 72.62957 * 10 9 7 12 12 C 1.38241 * 119.99840 * 192.97446 * 11 10 9 13 13 C 1.38234 * 119.99395 * 179.79325 * 12 11 10 14 14 C 1.38230 * 120.00201 * 0.46345 * 13 12 11 15 15 C 1.38231 * 120.00288 * 359.76807 * 14 13 12 16 16 C 1.38228 * 119.99705 * 0.02562 * 15 14 13 17 17 C 1.53785 * 113.61354 * 301.44112 * 10 9 7 18 18 C 1.53775 * 87.08136 * 270.88114 * 17 10 9 19 19 H 1.08997 * 113.61811 * 220.02330 * 18 17 10 20 20 O 1.42902 * 113.61688 * 89.11546 * 18 17 10 21 21 C 1.53780 * 113.61911 * 203.94207 * 10 9 7 22 22 C 1.38562 * 119.85951 * 179.97438 * 4 3 2 23 23 C 1.38250 * 119.99764 * 359.72240 * 22 4 3 24 24 C 1.38254 * 120.14266 * 0.55251 * 23 22 4 25 25 C 1.50699 * 119.92601 * 179.72296 * 24 23 22 26 26 O 1.42904 * 109.47232 * 119.72159 * 25 24 23 27 27 Si 1.86299 * 109.47048 * 359.72612 * 25 24 23 28 28 C 1.38244 * 120.14814 * 359.44713 * 24 23 22 29 29 H 1.09011 * 109.47041 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47264 * 299.99898 * 1 2 3 31 31 H 1.08996 * 109.46926 * 60.00532 * 1 2 3 32 32 H 1.08997 * 109.46549 * 299.99470 * 6 5 4 33 33 H 1.08996 * 109.47154 * 59.99589 * 6 5 4 34 34 H 0.97001 * 120.00458 * 355.26687 * 9 7 6 35 35 H 1.07996 * 120.00106 * 0.02562 * 12 11 10 36 36 H 1.08003 * 119.99533 * 180.25237 * 13 12 11 37 37 H 1.08003 * 119.99825 * 179.79290 * 14 13 12 38 38 H 1.08001 * 119.99869 * 179.97438 * 15 14 13 39 39 H 1.08007 * 120.00068 * 179.97438 * 16 15 14 40 40 H 1.09002 * 113.61347 * 25.43107 * 17 10 9 41 41 H 1.08997 * 113.61547 * 156.32730 * 17 10 9 42 42 H 0.96699 * 113.99714 * 180.02562 * 20 18 17 43 43 H 1.08998 * 113.61175 * 203.66487 * 21 10 9 44 44 H 1.08999 * 113.60939 * 334.56771 * 21 10 9 45 45 H 1.08004 * 120.00359 * 179.97438 * 22 4 3 46 46 H 1.07997 * 119.92832 * 180.29396 * 23 22 4 47 47 H 1.08997 * 109.47390 * 239.72634 * 25 24 23 48 48 H 0.96694 * 114.00090 * 179.97438 * 26 25 24 49 49 H 1.48498 * 110.00187 * 59.99987 * 27 25 24 50 50 H 1.48500 * 110.00035 * 181.31908 * 27 25 24 51 51 H 1.08003 * 120.00054 * 180.25822 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1477 -0.0005 6 6 5.6003 0.3007 -0.0005 7 6 6.2519 -1.0581 0.0001 8 8 5.5671 -2.0591 0.0010 9 7 7.5957 -1.1611 -0.0003 10 6 8.2296 -2.4777 0.1050 11 6 8.1001 -3.2920 -1.1564 12 6 8.4000 -4.6414 -1.1417 13 6 8.2771 -5.3892 -2.2978 14 6 7.8636 -4.7857 -3.4707 15 6 7.5684 -3.4354 -3.4865 16 6 7.6871 -2.6885 -2.3294 17 6 7.8415 -3.2481 1.3781 18 6 9.0339 -2.5602 2.0634 19 1 9.5912 -3.2162 2.7320 20 8 8.7040 -1.3055 2.6625 21 6 9.6609 -2.4293 0.6652 22 6 4.0602 2.5234 -0.0011 23 6 3.3028 3.6799 -0.0069 24 6 1.9223 3.6057 -0.0006 25 6 1.1015 4.8696 -0.0007 26 8 0.2767 4.9019 -1.1672 27 14 2.2363 6.3470 -0.0015 28 6 1.2931 2.3748 -0.0001 29 1 -0.3634 -1.0278 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5137 -0.8900 32 1 5.9064 0.8504 -0.8906 33 1 5.9065 0.8506 0.8894 34 1 8.1432 -0.3635 -0.0703 35 1 8.7266 -5.1121 -0.2263 36 1 8.5075 -6.4443 -2.2854 37 1 7.7709 -5.3694 -4.3747 38 1 7.2457 -2.9639 -4.4030 39 1 7.4569 -1.6333 -2.3418 40 1 6.8745 -2.9559 1.7876 41 1 7.9543 -4.3283 1.2862 42 1 9.4502 -0.8678 3.0948 43 1 10.2711 -3.2857 0.3784 44 1 10.1627 -1.4760 0.4992 45 1 5.1386 2.5840 -0.0011 46 1 3.7906 4.6434 -0.0121 47 1 0.4730 4.8947 0.8895 48 1 -0.2806 5.6893 -1.2332 49 1 3.0986 6.3245 -1.2103 50 1 1.4394 7.5996 0.0306 51 1 0.2145 2.3196 0.0006 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_60476.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:07 Heat of formation + Delta-G solvation = -78.182870 kcal Electronic energy + Delta-G solvation = -36087.155744 eV Core-core repulsion = 31307.084293 eV Total energy + Delta-G solvation = -4780.071451 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -42.13734 -41.56995 -40.01452 -39.27799 -38.89548 -38.64054 -37.06193 -36.22104 -34.09778 -32.08585 -31.71359 -31.58396 -31.34916 -29.46036 -28.36514 -27.03065 -26.19045 -25.59022 -23.65243 -23.33932 -22.55466 -22.26376 -21.56036 -20.27303 -19.56703 -18.72527 -18.61010 -18.37630 -18.07381 -17.77863 -17.34379 -17.26114 -16.87648 -16.45173 -16.39262 -16.04429 -15.83342 -15.72133 -15.59300 -15.48591 -15.26476 -15.04395 -14.66772 -14.35392 -14.21438 -14.02685 -13.97517 -13.92712 -13.62267 -13.43527 -13.38952 -13.25392 -12.92686 -12.74729 -12.49394 -12.38104 -12.18229 -12.14615 -12.08129 -11.87459 -11.85372 -11.65775 -11.44902 -11.05241 -10.64716 -10.51912 -10.02680 -9.72679 -9.68019 -9.49197 -8.75415 -4.97829 0.26982 0.38665 0.49722 0.59418 1.26738 1.50624 1.58325 1.68283 1.94339 2.39889 2.58959 2.62122 2.85406 3.00637 3.31445 3.36841 3.54616 3.57432 3.67616 3.72783 3.79205 3.87607 3.91106 4.02477 4.05485 4.11569 4.16559 4.21208 4.25937 4.29307 4.31649 4.35026 4.38347 4.48755 4.55699 4.60915 4.65619 4.66430 4.70511 4.72069 4.79948 4.93923 5.07428 5.09138 5.13376 5.18236 5.19434 5.44309 5.47757 5.63206 5.64342 5.71372 5.81116 6.06272 6.16437 6.41965 6.46274 6.58332 6.64128 7.28264 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.106 3.894 4 C 0.105 3.895 5 O -0.276 6.276 6 C 0.039 3.961 7 C 0.520 3.480 8 O -0.497 6.497 9 N -0.699 5.699 10 C 0.202 3.798 11 C -0.075 4.075 12 C -0.113 4.113 13 C -0.117 4.117 14 C -0.121 4.121 15 C -0.118 4.118 16 C -0.102 4.102 17 C -0.130 4.130 18 C 0.080 3.920 19 H 0.075 0.925 20 O -0.545 6.545 21 C -0.162 4.162 22 C -0.169 4.169 23 C -0.111 4.111 24 C -0.070 4.070 25 C -0.074 4.074 26 O -0.536 6.536 27 Si 0.683 3.317 28 C -0.145 4.145 29 H 0.102 0.898 30 H 0.055 0.945 31 H 0.056 0.944 32 H 0.090 0.910 33 H 0.096 0.904 34 H 0.404 0.596 35 H 0.123 0.877 36 H 0.123 0.877 37 H 0.121 0.879 38 H 0.121 0.879 39 H 0.114 0.886 40 H 0.091 0.909 41 H 0.107 0.893 42 H 0.381 0.619 43 H 0.106 0.894 44 H 0.083 0.917 45 H 0.140 0.860 46 H 0.132 0.868 47 H 0.076 0.924 48 H 0.380 0.620 49 H -0.254 1.254 50 H -0.262 1.262 51 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.041 3.532 2.987 6.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.060 3.940 4 C 0.059 3.941 5 O -0.188 6.188 6 C -0.040 4.040 7 C 0.304 3.696 8 O -0.370 6.370 9 N -0.353 5.353 10 C 0.115 3.885 11 C -0.076 4.076 12 C -0.132 4.132 13 C -0.135 4.135 14 C -0.139 4.139 15 C -0.136 4.136 16 C -0.120 4.120 17 C -0.168 4.168 18 C 0.020 3.980 19 H 0.092 0.908 20 O -0.351 6.351 21 C -0.200 4.200 22 C -0.188 4.188 23 C -0.129 4.129 24 C -0.070 4.070 25 C -0.183 4.183 26 O -0.344 6.344 27 Si 0.584 3.416 28 C -0.163 4.163 29 H 0.121 0.879 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.108 0.892 33 H 0.114 0.886 34 H 0.239 0.761 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.139 0.861 38 H 0.139 0.861 39 H 0.132 0.868 40 H 0.109 0.891 41 H 0.125 0.875 42 H 0.228 0.772 43 H 0.125 0.875 44 H 0.101 0.899 45 H 0.158 0.842 46 H 0.150 0.850 47 H 0.094 0.906 48 H 0.227 0.773 49 H -0.179 1.179 50 H -0.187 1.187 51 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 4.470 2.408 2.249 5.553 hybrid contribution -0.430 1.072 -0.569 1.288 sum 4.040 3.480 1.680 5.591 Atomic orbital electron populations 1.23119 0.78255 1.04320 1.01299 1.86249 1.21233 1.25338 1.88598 1.18248 0.89024 0.85488 1.01212 1.18268 0.88287 0.85800 1.01704 1.86279 1.16058 1.27654 1.88805 1.22466 0.81223 0.96410 1.03862 1.19907 0.82241 0.90501 0.76908 1.90802 1.62465 1.37767 1.45922 1.45250 1.05704 1.08334 1.76017 1.19800 0.93739 0.83034 0.91916 1.19766 0.99664 0.94016 0.94181 1.20892 1.00813 0.93032 0.98416 1.21123 0.99709 0.99854 0.92803 1.21183 0.99436 0.95009 0.98279 1.21154 0.99794 0.94429 0.98196 1.20870 0.99008 0.99769 0.92348 1.23503 0.99937 0.99745 0.93644 1.22729 0.96743 0.86236 0.92275 0.90751 1.86514 1.39350 1.34306 1.74882 1.24041 0.94668 1.04218 0.97028 1.20960 1.00442 0.90583 1.06789 1.20611 0.92608 0.97910 1.01729 1.18928 0.92898 0.93162 1.02015 1.24779 0.99189 1.04162 0.90200 1.86593 1.57828 1.46611 1.43339 0.95058 0.82395 0.75152 0.88948 1.20897 1.00291 0.90432 1.04727 0.87928 0.92594 0.92559 0.89168 0.88595 0.76139 0.85961 0.85871 0.86052 0.86144 0.86769 0.89077 0.87504 0.77203 0.87525 0.89880 0.84223 0.85020 0.90560 0.77259 1.17877 1.18699 0.84336 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.03 9.81 101.05 0.99 1.02 16 2 O -0.30 -1.65 10.28 -34.20 -0.35 -2.00 16 3 C 0.11 0.49 6.70 -39.12 -0.26 0.23 16 4 C 0.11 0.42 6.70 -39.12 -0.26 0.15 16 5 O -0.28 -1.42 9.46 -47.37 -0.45 -1.86 16 6 C 0.04 0.03 5.22 36.01 0.19 0.22 16 7 C 0.52 1.53 6.58 -10.99 -0.07 1.46 16 8 O -0.50 -3.88 14.97 -14.35 -0.21 -4.09 16 9 N -0.70 0.10 3.64 -47.92 -0.17 -0.07 16 10 C 0.20 0.09 0.94 -132.15 -0.12 -0.04 16 11 C -0.07 -0.16 4.86 -104.62 -0.51 -0.67 16 12 C -0.11 -0.17 8.71 -39.58 -0.34 -0.52 16 13 C -0.12 -0.19 10.05 -39.59 -0.40 -0.59 16 14 C -0.12 -0.25 10.05 -39.59 -0.40 -0.65 16 15 C -0.12 -0.30 10.05 -39.59 -0.40 -0.70 16 16 C -0.10 -0.29 9.05 -39.59 -0.36 -0.65 16 17 C -0.13 -0.14 6.55 -25.92 -0.17 -0.31 16 18 C 0.08 -0.12 5.28 -25.92 -0.14 -0.26 16 19 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 20 O -0.55 0.67 13.09 -35.23 -0.46 0.20 16 21 C -0.16 0.36 7.14 -25.92 -0.18 0.18 16 22 C -0.17 -0.17 9.04 -39.46 -0.36 -0.53 16 23 C -0.11 -0.10 8.66 -39.57 -0.34 -0.44 16 24 C -0.07 -0.14 5.42 -104.61 -0.57 -0.70 16 25 C -0.07 -0.02 2.81 36.01 0.10 0.09 16 26 O -0.54 -0.74 12.74 -35.23 -0.45 -1.19 16 27 Si 0.68 -0.63 29.78 -169.99 -5.06 -5.70 16 28 C -0.14 -0.42 8.60 -39.46 -0.34 -0.76 16 29 H 0.10 -0.02 8.14 -51.92 -0.42 -0.44 16 30 H 0.06 -0.01 7.66 -51.93 -0.40 -0.41 16 31 H 0.06 0.03 7.66 -51.93 -0.40 -0.37 16 32 H 0.09 -0.18 7.66 -51.93 -0.40 -0.58 16 33 H 0.10 -0.17 7.66 -51.93 -0.40 -0.57 16 34 H 0.40 -1.27 8.72 -40.82 -0.36 -1.63 16 35 H 0.12 -0.07 6.56 -52.49 -0.34 -0.42 16 36 H 0.12 -0.04 8.06 -52.48 -0.42 -0.46 16 37 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 38 H 0.12 0.13 8.06 -52.49 -0.42 -0.30 16 39 H 0.11 0.23 6.86 -52.48 -0.36 -0.13 16 40 H 0.09 0.40 6.94 -51.93 -0.36 0.04 16 41 H 0.11 0.00 6.23 -51.93 -0.32 -0.32 16 42 H 0.38 -2.02 9.12 45.56 0.42 -1.61 16 43 H 0.11 -0.31 7.79 -51.93 -0.40 -0.71 16 44 H 0.08 -0.28 8.11 -51.93 -0.42 -0.70 16 45 H 0.14 -0.31 6.30 -52.48 -0.33 -0.64 16 46 H 0.13 -0.19 4.87 -52.49 -0.26 -0.45 16 47 H 0.08 -0.11 7.96 -51.93 -0.41 -0.53 16 48 H 0.38 -1.01 8.74 45.56 0.40 -0.61 16 49 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 50 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 51 H 0.14 0.23 6.30 -52.48 -0.33 -0.10 16 LS Contribution 415.96 15.07 6.27 6.27 Total: 0.00 -13.07 415.96 -10.82 -23.89 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -5.99 Total: -11.98 kcal Atomic # 6 Polarization: 0.47 SS G_CDS: -3.94 Total: -3.47 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.17 Total: -0.07 kcal Atomic # 8 Polarization: -7.02 SS G_CDS: -1.92 Total: -8.95 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.06 Total: -5.70 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -13.07 -10.82 -23.89 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_60476.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.294 kcal (2) G-P(sol) polarization free energy of solvation -13.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.360 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.823 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.889 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.183 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds