Wall clock time and date at job start Sat Mar 6 2021 23:52:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86306 * 109.47226 * 2 1 4 4 C 1.50696 * 109.47266 * 239.99960 * 2 1 3 5 5 C 1.35457 * 125.56709 * 120.02530 * 4 2 1 6 6 C 1.39830 * 107.86787 * 179.97438 * 5 4 2 7 7 C 1.37874 * 107.08534 * 359.97438 * 6 5 4 8 8 C 1.46673 * 126.23472 * 179.97438 * 7 6 5 9 9 O 1.21689 * 120.00322 * 0.03062 * 8 7 6 10 10 N 1.34780 * 119.99935 * 180.02562 * 8 7 6 11 11 C 1.46509 * 119.99928 * 174.76599 * 10 8 7 12 12 C 1.50693 * 112.85093 * 292.11252 * 11 10 8 13 13 C 1.38241 * 120.00085 * 165.14243 * 12 11 10 14 14 C 1.38235 * 120.00172 * 179.76457 * 13 12 11 15 15 C 1.38231 * 119.99657 * 0.51003 * 14 13 12 16 16 C 1.38236 * 120.00446 * 359.74343 * 15 14 13 17 17 C 1.38236 * 119.99917 * 0.02562 * 16 15 14 18 18 C 1.53777 * 113.61369 * 160.80314 * 11 10 8 19 19 C 1.53787 * 87.08261 * 270.88983 * 18 11 10 20 20 H 1.09004 * 113.61070 * 220.01949 * 19 18 11 21 21 O 1.42896 * 113.61675 * 89.11612 * 19 18 11 22 22 C 1.53784 * 113.60981 * 63.30755 * 11 10 8 23 23 N 1.35533 * 125.56306 * 299.71617 * 4 2 1 24 24 H 0.96705 * 113.99981 * 60.00273 * 1 2 3 25 25 H 1.08999 * 109.47430 * 119.99608 * 2 1 3 26 26 H 1.48496 * 110.00035 * 59.99710 * 3 2 1 27 27 H 1.48500 * 110.00149 * 181.31650 * 3 2 1 28 28 H 1.07999 * 126.06047 * 359.96343 * 5 4 2 29 29 H 1.08000 * 126.46085 * 179.97438 * 6 5 4 30 30 H 0.97002 * 120.00299 * 354.77660 * 10 8 7 31 31 H 1.08007 * 119.99510 * 0.02562 * 13 12 11 32 32 H 1.07994 * 120.00056 * 180.23145 * 14 13 12 33 33 H 1.08001 * 119.99804 * 179.72367 * 15 14 13 34 34 H 1.07994 * 120.00191 * 179.97438 * 16 15 14 35 35 H 1.07995 * 120.00177 * 179.97438 * 17 16 15 36 36 H 1.09003 * 113.61175 * 25.43516 * 18 11 10 37 37 H 1.09000 * 113.61542 * 156.34031 * 18 11 10 38 38 H 0.96698 * 114.00014 * 82.49934 * 21 19 18 39 39 H 1.08994 * 113.61086 * 203.66327 * 22 11 10 40 40 H 1.09003 * 113.61512 * 334.48616 * 22 11 10 41 41 H 0.96997 * 125.67609 * 0.02977 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7138 -0.1637 -2.1915 6 6 2.9578 -1.1461 -3.1563 7 6 2.3032 -2.2881 -2.7461 8 6 2.2798 -3.5744 -3.4505 9 8 2.8785 -3.7033 -4.5021 10 7 1.5953 -4.6137 -2.9330 11 6 1.4759 -5.8621 -3.6905 12 6 0.6320 -5.7160 -4.9303 13 6 0.6660 -6.6921 -5.9086 14 6 -0.1118 -6.5605 -7.0438 15 6 -0.9156 -5.4475 -7.2055 16 6 -0.9456 -4.4688 -6.2297 17 6 -0.1714 -4.6028 -5.0924 18 6 1.0962 -7.0745 -2.8239 19 6 2.6030 -7.2897 -2.6037 20 1 2.9017 -8.3378 -2.6230 21 8 3.1232 -6.5836 -1.4755 22 6 2.8223 -6.5619 -3.9406 23 7 1.6788 -2.0023 -1.5530 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5138 0.8900 26 1 1.5615 2.4679 1.2084 27 1 3.5346 1.7703 -0.0321 28 1 3.0834 0.8509 -2.2095 29 1 3.5478 -1.0318 -4.0536 30 1 1.1815 -4.5352 -2.0592 31 1 1.2971 -7.5597 -5.7840 32 1 -0.0881 -7.3249 -7.8063 33 1 -1.5199 -5.3425 -8.0944 34 1 -1.5733 -3.5992 -6.3563 35 1 -0.1946 -3.8380 -4.3302 36 1 0.5557 -6.8094 -1.9152 37 1 0.6175 -7.8782 -3.3833 38 1 2.9882 -7.0364 -0.6318 39 1 2.8154 -7.2255 -4.8052 40 1 3.6750 -5.8829 -3.9348 41 1 1.1453 -2.6218 -1.0311 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_6580494.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:20 Heat of formation + Delta-G solvation = -0.336773 kcal Electronic energy + Delta-G solvation = -26615.287803 eV Core-core repulsion = 22849.831863 eV Total energy + Delta-G solvation = -3765.455940 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.130 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.58457 -41.83271 -39.47707 -39.13657 -37.75818 -36.28534 -34.18790 -32.13484 -31.73525 -31.62360 -31.18366 -27.20949 -27.00815 -25.61294 -23.64748 -23.23074 -22.32161 -21.58854 -21.03814 -20.23315 -19.86206 -18.68689 -18.16531 -17.86237 -16.98321 -16.68204 -16.45119 -16.21656 -15.85316 -15.51994 -15.42751 -15.17179 -15.13614 -14.79441 -14.44043 -14.37768 -14.27603 -14.00770 -13.90293 -13.65648 -13.56443 -13.30040 -12.93829 -12.42875 -12.23468 -12.21790 -12.04337 -11.89422 -11.52999 -11.08836 -10.97203 -10.71011 -10.09069 -10.02591 -9.76796 -9.53873 -9.20034 -5.05146 0.43551 0.45891 0.55316 1.12912 1.57126 1.67093 1.85586 1.98476 2.18215 2.47482 2.81550 2.97055 3.28492 3.34576 3.51038 3.56457 3.64340 3.68959 3.88505 4.08457 4.12787 4.21881 4.24750 4.27795 4.31539 4.44598 4.52159 4.56656 4.62591 4.67760 4.75638 4.90785 5.04299 5.08203 5.09481 5.13630 5.15890 5.40165 5.59649 5.63888 5.67648 5.77562 5.87978 6.12333 6.25515 6.37108 6.50715 6.54423 7.24293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.055 4.055 3 Si 0.722 3.278 4 C 0.020 3.980 5 C -0.200 4.200 6 C -0.100 4.100 7 C -0.047 4.047 8 C 0.595 3.405 9 O -0.513 6.513 10 N -0.703 5.703 11 C 0.201 3.799 12 C -0.074 4.074 13 C -0.112 4.112 14 C -0.117 4.117 15 C -0.120 4.120 16 C -0.117 4.117 17 C -0.103 4.103 18 C -0.163 4.163 19 C 0.079 3.921 20 H 0.075 0.925 21 O -0.546 6.546 22 C -0.130 4.130 23 N -0.522 5.522 24 H 0.383 0.617 25 H 0.115 0.885 26 H -0.254 1.254 27 H -0.253 1.253 28 H 0.150 0.850 29 H 0.152 0.848 30 H 0.396 0.604 31 H 0.123 0.877 32 H 0.124 0.876 33 H 0.122 0.878 34 H 0.121 0.879 35 H 0.114 0.886 36 H 0.080 0.920 37 H 0.107 0.893 38 H 0.380 0.620 39 H 0.107 0.893 40 H 0.092 0.908 41 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.262 -1.129 1.683 3.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.165 4.165 3 Si 0.621 3.379 4 C -0.098 4.098 5 C -0.224 4.224 6 C -0.126 4.126 7 C -0.161 4.161 8 C 0.382 3.618 9 O -0.387 6.387 10 N -0.354 5.354 11 C 0.114 3.886 12 C -0.076 4.076 13 C -0.131 4.131 14 C -0.135 4.135 15 C -0.138 4.138 16 C -0.135 4.135 17 C -0.122 4.122 18 C -0.201 4.201 19 C 0.019 3.981 20 H 0.093 0.907 21 O -0.351 6.351 22 C -0.168 4.168 23 N -0.119 5.119 24 H 0.231 0.769 25 H 0.132 0.868 26 H -0.179 1.179 27 H -0.177 1.177 28 H 0.168 0.832 29 H 0.170 0.830 30 H 0.230 0.770 31 H 0.141 0.859 32 H 0.142 0.858 33 H 0.140 0.860 34 H 0.139 0.861 35 H 0.132 0.868 36 H 0.099 0.901 37 H 0.126 0.874 38 H 0.227 0.773 39 H 0.125 0.875 40 H 0.111 0.889 41 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -2.172 -0.649 1.491 2.713 hybrid contribution -0.623 -1.325 1.235 1.915 sum -2.795 -1.974 2.726 4.375 Atomic orbital electron populations 1.86494 1.17073 1.81771 1.49629 1.24962 0.85156 1.11051 0.95352 0.94000 0.81111 0.75993 0.86787 1.21120 1.03946 0.85143 0.99615 1.20697 1.05139 1.00594 0.96000 1.21311 1.00401 0.90662 1.00226 1.20492 1.07975 0.96629 0.91005 1.16968 0.78645 0.81688 0.84491 1.90874 1.42903 1.82707 1.22228 1.45344 1.56039 1.12676 1.21292 1.19802 0.95593 0.83622 0.89621 1.19726 0.97167 0.95353 0.95319 1.20903 0.99515 0.98901 0.93740 1.21131 0.96629 0.98132 0.97565 1.21193 0.99242 0.94327 0.99077 1.21150 0.99217 0.99040 0.94070 1.20880 0.96333 0.97108 0.97833 1.24049 0.98355 0.97235 1.00423 1.22747 0.92207 0.95367 0.87752 0.90701 1.86530 1.81565 1.50013 1.16964 1.23518 0.98120 0.99456 0.95706 1.41935 1.40391 1.10912 1.18627 0.76903 0.86800 1.17859 1.17686 0.83216 0.83047 0.76951 0.85914 0.85816 0.85983 0.86089 0.86841 0.90110 0.87427 0.77292 0.87500 0.88929 0.74688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.68 12.88 -35.23 -0.45 0.22 16 2 C -0.05 0.08 3.08 36.00 0.11 0.19 16 3 Si 0.72 -1.45 30.54 -169.99 -5.19 -6.64 16 4 C 0.02 0.00 6.47 -81.95 -0.53 -0.54 16 5 C -0.20 -0.09 9.32 -39.98 -0.37 -0.46 16 6 C -0.10 -0.23 10.65 -39.12 -0.42 -0.65 16 7 C -0.05 -0.10 7.05 -81.98 -0.58 -0.68 16 8 C 0.59 2.03 6.30 -12.85 -0.08 1.95 16 9 O -0.51 -3.59 15.33 5.20 0.08 -3.51 16 10 N -0.70 -0.44 3.76 -49.22 -0.19 -0.62 16 11 C 0.20 0.14 0.94 -132.16 -0.12 0.01 16 12 C -0.07 -0.15 4.84 -104.62 -0.51 -0.66 16 13 C -0.11 -0.15 8.80 -39.58 -0.35 -0.50 16 14 C -0.12 -0.15 10.05 -39.59 -0.40 -0.55 16 15 C -0.12 -0.19 10.05 -39.58 -0.40 -0.59 16 16 C -0.12 -0.24 10.05 -39.58 -0.40 -0.64 16 17 C -0.10 -0.27 8.97 -39.58 -0.35 -0.62 16 18 C -0.16 0.30 7.13 -25.92 -0.18 0.11 16 19 C 0.08 -0.08 5.28 -25.91 -0.14 -0.22 16 20 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 21 O -0.55 0.21 13.09 -35.23 -0.46 -0.25 16 22 C -0.13 -0.16 6.56 -25.92 -0.17 -0.33 16 23 N -0.52 0.14 5.99 -5.70 -0.03 0.10 16 24 H 0.38 -1.79 8.70 45.56 0.40 -1.39 16 25 H 0.11 -0.14 7.96 -51.93 -0.41 -0.55 16 26 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 27 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 28 H 0.15 -0.24 6.17 -52.49 -0.32 -0.56 16 29 H 0.15 0.34 8.06 -52.49 -0.42 -0.08 16 30 H 0.40 -0.64 7.82 -40.82 -0.32 -0.96 16 31 H 0.12 -0.09 6.45 -52.48 -0.34 -0.43 16 32 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 33 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 34 H 0.12 0.06 8.06 -52.49 -0.42 -0.37 16 35 H 0.11 0.24 6.78 -52.49 -0.36 -0.11 16 36 H 0.08 -0.22 8.10 -51.93 -0.42 -0.64 16 37 H 0.11 -0.28 7.85 -51.93 -0.41 -0.69 16 38 H 0.38 -1.69 9.12 45.56 0.42 -1.27 16 39 H 0.11 -0.02 6.14 -51.93 -0.32 -0.34 16 40 H 0.09 0.41 7.02 -51.93 -0.36 0.04 16 41 H 0.42 -0.98 8.20 -40.82 -0.33 -1.31 16 LS Contribution 342.00 15.07 5.15 5.15 Total: 0.00 -9.46 342.00 -10.07 -19.53 By element: Atomic # 1 Polarization: -5.73 SS G_CDS: -4.10 Total: -9.83 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -4.89 Total: -4.16 kcal Atomic # 7 Polarization: -0.30 SS G_CDS: -0.22 Total: -0.52 kcal Atomic # 8 Polarization: -2.70 SS G_CDS: -0.84 Total: -3.54 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.19 Total: -6.64 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -9.46 -10.07 -19.53 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_6580494.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.195 kcal (2) G-P(sol) polarization free energy of solvation -9.458 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.737 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.074 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.532 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.337 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds