Wall clock time and date at job start Sat Mar 6 2021 23:52:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33820 * 122.44760 * 2 1 4 4 C 1.50696 * 124.52491 * 0.03419 * 3 2 1 5 5 O 1.42901 * 109.46929 * 245.18197 * 4 3 2 6 6 Si 1.86299 * 109.47557 * 125.17766 * 4 3 2 7 7 S 1.70621 * 110.95222 * 179.78506 * 3 2 1 8 8 C 1.75836 * 91.56399 * 0.31131 * 7 3 2 9 9 C 1.46575 * 125.45458 * 179.97438 * 8 7 3 10 10 O 1.21711 * 119.99706 * 179.69385 * 9 8 7 11 11 N 1.34770 * 120.00796 * 359.69332 * 9 8 7 12 12 C 1.46494 * 120.00550 * 185.45310 * 11 9 8 13 13 C 1.50696 * 112.85176 * 284.46569 * 12 11 9 14 14 C 1.38235 * 120.00195 * 166.76028 * 13 12 11 15 15 C 1.38233 * 120.00033 * 179.81530 * 14 13 12 16 16 C 1.38243 * 120.00150 * 0.39293 * 15 14 13 17 17 C 1.38235 * 119.99542 * 359.86140 * 16 15 14 18 18 C 1.38232 * 119.99940 * 347.03746 * 13 12 11 19 19 C 1.53782 * 113.61536 * 153.16018 * 12 11 9 20 20 C 1.53783 * 87.08296 * 270.88364 * 19 12 11 21 21 H 1.08995 * 113.68911 * 220.00560 * 20 19 12 22 22 O 1.42901 * 113.61112 * 89.11638 * 20 19 12 23 23 C 1.53785 * 87.08061 * 334.56790 * 20 19 12 24 24 C 1.36652 * 109.08097 * 359.69460 * 8 7 3 25 25 H 1.09000 * 109.46765 * 265.32323 * 1 2 3 26 26 H 1.08999 * 109.47192 * 25.31746 * 1 2 3 27 27 H 1.08993 * 109.47232 * 145.32453 * 1 2 3 28 28 H 1.09000 * 109.47133 * 5.17155 * 4 3 2 29 29 H 0.96702 * 113.99534 * 299.99893 * 5 4 3 30 30 H 1.48501 * 109.99760 * 58.68132 * 6 4 3 31 31 H 1.48499 * 109.99678 * 179.97438 * 6 4 3 32 32 H 0.97006 * 119.99538 * 5.45652 * 11 9 8 33 33 H 1.07999 * 119.99953 * 0.02562 * 14 13 12 34 34 H 1.08000 * 120.00520 * 180.23251 * 15 14 13 35 35 H 1.07991 * 119.99880 * 179.83748 * 16 15 14 36 36 H 1.07999 * 119.99645 * 179.97438 * 17 16 15 37 37 H 1.08002 * 120.00119 * 359.97438 * 18 13 12 38 38 H 1.08996 * 113.61594 * 156.33411 * 19 12 11 39 39 H 1.09004 * 113.61582 * 25.43575 * 19 12 11 40 40 H 0.96694 * 114.00078 * 82.50136 * 22 20 19 41 41 H 1.08998 * 113.61228 * 139.97682 * 23 20 19 42 42 H 1.09002 * 113.61191 * 270.88380 * 23 20 19 43 43 H 1.07998 * 123.35087 * 180.20610 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6355 2.5162 0.0007 5 8 1.9691 3.1761 -1.2221 6 14 2.3245 3.4832 1.4363 7 16 3.8970 0.7893 0.0060 8 6 3.5938 -0.9427 -0.0010 9 6 4.6232 -1.9861 -0.0007 10 8 4.3002 -3.1596 -0.0002 11 7 5.9274 -1.6463 -0.0008 12 6 6.9547 -2.6836 -0.1210 13 6 7.1502 -3.4640 1.1532 14 6 7.8723 -4.6427 1.1380 15 6 8.0548 -5.3566 2.3076 16 6 7.5085 -4.8961 3.4910 17 6 6.7820 -3.7201 3.5052 18 6 6.6027 -3.0042 2.3363 19 6 8.2673 -2.1813 -0.7454 20 6 7.6644 -2.5451 -2.1125 21 1 8.3790 -2.9977 -2.7999 22 8 6.9165 -1.4835 -2.7091 23 6 6.7926 -3.5697 -1.3674 24 6 2.2446 -1.1601 -0.0006 25 1 -0.3633 -0.0838 1.0243 26 1 -0.3633 0.9289 -0.4395 27 1 -0.3633 -0.8451 -0.5846 28 1 0.5515 2.4502 0.0939 29 1 2.9198 3.2702 -1.3715 30 1 3.8046 3.5532 1.3378 31 1 1.7513 4.8530 1.4477 32 1 6.1857 -0.7146 0.0788 33 1 8.2966 -5.0041 0.2129 34 1 8.6221 -6.2756 2.2964 35 1 7.6489 -5.4552 4.4041 36 1 6.3548 -3.3605 4.4296 37 1 6.0351 -2.0854 2.3475 38 1 9.1362 -2.7823 -0.4776 39 1 8.4333 -1.1123 -0.6119 40 1 7.4593 -0.8359 -3.1792 41 1 5.7682 -3.6215 -1.7360 42 1 7.2585 -4.5503 -1.2696 43 1 1.8019 -2.1451 -0.0011 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_6739946.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:27 Heat of formation + Delta-G solvation = -17.179779 kcal Electronic energy + Delta-G solvation = -28302.240177 eV Core-core repulsion = 24406.868267 eV Total energy + Delta-G solvation = -3895.371909 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.107 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.11107 -40.21572 -39.43738 -39.09456 -37.65578 -36.23957 -34.12943 -32.38066 -31.64701 -31.60262 -29.85526 -27.24267 -26.98077 -25.51941 -24.25837 -23.40922 -22.46627 -21.74235 -20.43533 -20.06579 -19.41997 -18.67899 -17.99393 -17.74204 -17.45262 -16.81348 -16.43966 -16.26157 -15.90155 -15.77427 -15.47903 -15.44933 -15.20536 -14.88028 -14.66184 -14.38577 -14.23668 -14.03854 -13.99757 -13.59988 -13.49803 -13.29561 -13.14850 -13.03687 -12.93549 -12.45238 -12.39069 -12.28050 -12.19080 -11.87963 -11.76175 -11.50637 -11.06162 -10.95098 -10.87157 -10.07860 -9.75625 -9.65534 -9.52439 -9.42816 -5.10229 -0.58400 0.33485 0.46772 0.56517 0.74638 1.06857 1.31834 1.45300 1.83601 1.97663 2.27448 2.82713 2.99792 3.17489 3.36320 3.51055 3.54864 3.63839 3.66488 3.85737 4.07756 4.13469 4.14593 4.21447 4.24133 4.29722 4.38865 4.49810 4.54040 4.59897 4.63988 4.69653 4.70071 4.76833 4.85608 4.92584 4.99045 5.07905 5.10734 5.17148 5.29279 5.40051 5.42128 5.61655 5.68601 5.78845 6.13654 6.18624 6.43263 6.59018 7.20983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 C -0.092 4.092 3 C -0.230 4.230 4 C -0.043 4.043 5 O -0.522 6.522 6 Si 0.673 3.327 7 S 0.185 5.815 8 C -0.251 4.251 9 C 0.598 3.402 10 O -0.514 6.514 11 N -0.697 5.697 12 C 0.200 3.800 13 C -0.075 4.075 14 C -0.113 4.113 15 C -0.117 4.117 16 C -0.121 4.121 17 C -0.117 4.117 18 C -0.103 4.103 19 C -0.163 4.163 20 C 0.079 3.921 21 H 0.075 0.925 22 O -0.544 6.544 23 C -0.129 4.129 24 C -0.047 4.047 25 H 0.078 0.922 26 H 0.071 0.929 27 H 0.072 0.928 28 H 0.131 0.869 29 H 0.374 0.626 30 H -0.244 1.244 31 H -0.241 1.241 32 H 0.399 0.601 33 H 0.123 0.877 34 H 0.123 0.877 35 H 0.122 0.878 36 H 0.121 0.879 37 H 0.115 0.885 38 H 0.107 0.893 39 H 0.082 0.918 40 H 0.380 0.620 41 H 0.092 0.908 42 H 0.108 0.892 43 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.989 1.930 1.576 3.891 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.105 4.105 3 C -0.349 4.349 4 C -0.154 4.154 5 O -0.328 6.328 6 Si 0.571 3.429 7 S 0.454 5.546 8 C -0.371 4.371 9 C 0.384 3.616 10 O -0.390 6.390 11 N -0.348 5.348 12 C 0.113 3.887 13 C -0.076 4.076 14 C -0.131 4.131 15 C -0.135 4.135 16 C -0.139 4.139 17 C -0.135 4.135 18 C -0.121 4.121 19 C -0.201 4.201 20 C 0.020 3.980 21 H 0.093 0.907 22 O -0.350 6.350 23 C -0.167 4.167 24 C -0.080 4.080 25 H 0.096 0.904 26 H 0.090 0.910 27 H 0.091 0.909 28 H 0.148 0.852 29 H 0.222 0.778 30 H -0.168 1.168 31 H -0.165 1.165 32 H 0.234 0.766 33 H 0.141 0.859 34 H 0.141 0.859 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.133 0.867 38 H 0.126 0.874 39 H 0.100 0.900 40 H 0.228 0.772 41 H 0.111 0.889 42 H 0.126 0.874 43 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 3.411 2.406 2.009 4.633 hybrid contribution -0.146 -0.085 -1.153 1.165 sum 3.265 2.321 0.856 4.097 Atomic orbital electron populations 1.20635 0.88971 1.03411 1.02985 1.18657 0.98134 0.90695 1.03033 1.24363 0.98475 1.00715 1.11371 1.24606 1.05313 0.89712 0.95774 1.86675 1.28952 1.79028 1.38172 0.94716 0.81273 0.81820 0.85061 1.82869 1.03430 0.99106 1.69204 1.24472 0.97969 0.96434 1.18243 1.16817 0.81287 0.87419 0.76043 1.90866 1.81438 1.17930 1.48780 1.45276 1.04589 1.09600 1.75336 1.19829 0.88395 0.88639 0.91879 1.19766 0.98248 0.95534 0.94077 1.20894 0.99393 0.94419 0.98395 1.21130 0.99923 0.99813 0.92634 1.21191 0.97957 0.96491 0.98245 1.21157 0.98848 0.95427 0.98100 1.20898 0.99058 0.99918 0.92227 1.24052 0.96177 1.02929 0.96931 1.22736 0.93646 0.89223 0.92441 0.90699 1.86535 1.36965 1.38524 1.72931 1.23499 1.02904 0.97078 0.93225 1.20686 0.90878 1.00092 0.96375 0.90384 0.91018 0.90894 0.85172 0.77846 1.16780 1.16452 0.76566 0.85946 0.85854 0.86020 0.86078 0.86710 0.87426 0.89977 0.77247 0.88919 0.87417 0.82624 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.12 9.75 36.01 0.35 0.47 16 2 C -0.09 -0.07 5.78 -106.45 -0.62 -0.68 16 3 C -0.23 -0.07 4.80 -35.86 -0.17 -0.24 16 4 C -0.04 0.02 2.78 36.00 0.10 0.12 16 5 O -0.52 -0.51 12.88 -35.23 -0.45 -0.96 16 6 Si 0.67 -0.89 32.18 -169.99 -5.47 -6.37 16 7 S 0.18 -0.01 20.90 -107.50 -2.25 -2.26 16 8 C -0.25 -0.57 6.45 -36.79 -0.24 -0.81 16 9 C 0.60 2.17 6.65 -12.90 -0.09 2.09 16 10 O -0.51 -3.55 15.24 5.18 0.08 -3.48 16 11 N -0.70 -0.83 3.55 -49.25 -0.17 -1.01 16 12 C 0.20 0.18 0.95 -132.16 -0.13 0.06 16 13 C -0.07 -0.15 4.98 -104.63 -0.52 -0.67 16 14 C -0.11 -0.14 8.72 -39.58 -0.35 -0.49 16 15 C -0.12 -0.14 10.05 -39.58 -0.40 -0.54 16 16 C -0.12 -0.18 10.05 -39.58 -0.40 -0.58 16 17 C -0.12 -0.24 10.05 -39.58 -0.40 -0.64 16 18 C -0.10 -0.27 9.15 -39.58 -0.36 -0.63 16 19 C -0.16 0.27 7.14 -25.92 -0.19 0.08 16 20 C 0.08 -0.07 5.28 -25.92 -0.14 -0.21 16 21 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 22 O -0.54 0.09 13.09 -35.23 -0.46 -0.37 16 23 C -0.13 -0.17 6.52 -25.91 -0.17 -0.34 16 24 C -0.05 -0.10 9.80 -40.43 -0.40 -0.49 16 25 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 26 H 0.07 -0.10 6.45 -51.93 -0.34 -0.44 16 27 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.13 -0.19 5.99 -51.93 -0.31 -0.50 16 29 H 0.37 -0.65 8.70 45.56 0.40 -0.25 16 30 H -0.24 -0.01 7.11 56.52 0.40 0.40 16 31 H -0.24 -0.33 7.11 56.52 0.40 0.07 16 32 H 0.40 -0.24 7.88 -40.82 -0.32 -0.56 16 33 H 0.12 -0.10 6.54 -52.49 -0.34 -0.44 16 34 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 35 H 0.12 -0.03 8.06 -52.49 -0.42 -0.46 16 36 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 37 H 0.11 0.25 6.94 -52.49 -0.36 -0.12 16 38 H 0.11 -0.28 7.79 -51.93 -0.40 -0.68 16 39 H 0.08 -0.20 8.13 -51.93 -0.42 -0.62 16 40 H 0.38 -1.61 9.12 45.56 0.42 -1.20 16 41 H 0.09 0.41 6.72 -51.93 -0.35 0.07 16 42 H 0.11 -0.01 6.22 -51.93 -0.32 -0.33 16 43 H 0.16 0.30 8.06 -52.49 -0.42 -0.13 16 LS Contribution 368.06 15.07 5.55 5.55 Total: 0.00 -8.42 368.06 -11.79 -20.21 By element: Atomic # 1 Polarization: -3.29 SS G_CDS: -4.52 Total: -7.81 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -4.09 Total: -3.50 kcal Atomic # 7 Polarization: -0.83 SS G_CDS: -0.17 Total: -1.01 kcal Atomic # 8 Polarization: -3.97 SS G_CDS: -0.84 Total: -4.81 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.47 Total: -6.37 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.25 Total: -2.26 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -8.42 -11.79 -20.21 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_6739946.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.031 kcal (2) G-P(sol) polarization free energy of solvation -8.417 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.386 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.794 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds