Wall clock time and date at job start Sat Mar 6 2021 23:52:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50710 * 1 3 3 C 1.37935 * 120.07583 * 2 1 4 4 C 1.38380 * 120.14360 * 179.97438 * 3 2 1 5 5 C 1.50701 * 119.85306 * 179.97438 * 4 3 2 6 6 C 1.38342 * 120.29407 * 359.97438 * 4 3 2 7 7 C 1.50692 * 119.92546 * 180.02562 * 6 4 3 8 8 O 1.42902 * 109.47440 * 74.99915 * 7 6 4 9 9 Si 1.86297 * 109.46889 * 194.99650 * 7 6 4 10 10 C 1.37976 * 120.14134 * 0.28860 * 6 4 3 11 11 C 1.39553 * 119.85646 * 359.46572 * 10 6 4 12 12 C 1.47843 * 120.14680 * 180.29433 * 11 10 6 13 13 O 1.21559 * 119.99946 * 186.51740 * 12 11 10 14 14 N 1.34776 * 120.00006 * 6.51122 * 12 11 10 15 15 C 1.46503 * 119.99838 * 185.30627 * 14 12 11 16 16 C 1.50702 * 112.84651 * 283.58650 * 15 14 12 17 17 C 1.38237 * 119.99926 * 2.69384 * 16 15 14 18 18 C 1.38237 * 119.99737 * 179.76414 * 17 16 15 19 19 C 1.38238 * 120.00218 * 0.50642 * 18 17 16 20 20 C 1.38236 * 119.99723 * 359.74618 * 19 18 17 21 21 C 1.38231 * 119.99870 * 182.96319 * 16 15 14 22 22 C 1.53782 * 113.61352 * 152.28839 * 15 14 12 23 23 C 1.53784 * 87.07785 * 270.87669 * 22 15 14 24 24 H 1.09001 * 113.69498 * 220.00497 * 23 22 15 25 25 O 1.42905 * 113.61148 * 89.11776 * 23 22 15 26 26 C 1.53778 * 113.61698 * 54.78603 * 15 14 12 27 27 H 1.08996 * 109.46694 * 96.97429 * 1 2 3 28 28 H 1.08997 * 109.47152 * 216.98070 * 1 2 3 29 29 H 1.09000 * 109.46482 * 336.97586 * 1 2 3 30 30 H 1.07999 * 119.92815 * 359.95516 * 3 2 1 31 31 H 1.09002 * 109.47044 * 269.98389 * 5 4 3 32 32 H 1.09007 * 109.46932 * 29.97806 * 5 4 3 33 33 H 1.09000 * 109.46895 * 149.98050 * 5 4 3 34 34 H 1.08999 * 109.47434 * 314.99514 * 7 6 4 35 35 H 0.96696 * 113.99680 * 180.02562 * 8 7 6 36 36 H 1.48499 * 110.00147 * 299.99906 * 9 7 6 37 37 H 1.48500 * 110.00271 * 61.31896 * 9 7 6 38 38 H 1.08000 * 120.06919 * 179.70568 * 10 6 4 39 39 H 0.97000 * 119.99865 * 5.30491 * 14 12 11 40 40 H 1.07998 * 120.00254 * 359.97438 * 17 16 15 41 41 H 1.07995 * 120.00376 * 180.23174 * 18 17 16 42 42 H 1.08001 * 120.00288 * 179.72664 * 19 18 17 43 43 H 1.07999 * 120.00144 * 179.97438 * 20 19 18 44 44 H 1.07996 * 120.00423 * 0.02562 * 21 16 15 45 45 H 1.09003 * 113.61486 * 25.42420 * 22 15 14 46 46 H 1.08999 * 113.61672 * 156.33239 * 22 15 14 47 47 H 0.96697 * 114.00291 * 82.50037 * 25 23 22 48 48 H 1.09007 * 113.61294 * 203.66487 * 26 15 14 49 49 H 1.09000 * 113.61529 * 334.48186 * 26 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1984 1.1936 0.0000 4 6 3.5822 1.1953 0.0005 5 6 4.3308 2.5032 -0.0001 6 6 4.2814 0.0016 0.0016 7 6 5.7883 0.0131 0.0028 8 8 6.2610 0.3660 1.3043 9 14 6.4225 -1.6790 -0.4505 10 6 3.6021 -1.1993 -0.0039 11 6 2.2066 -1.2081 0.0008 12 6 1.4722 -2.4912 0.0016 13 8 0.2621 -2.4990 -0.1139 14 7 2.1443 -3.6523 0.1301 15 6 1.4323 -4.9275 0.0145 16 6 0.6332 -5.2653 1.2468 17 6 0.5856 -4.3768 2.3048 18 6 -0.1513 -4.6845 3.4331 19 6 -0.8322 -5.8853 3.5077 20 6 -0.7804 -6.7760 2.4519 21 6 -0.0476 -6.4660 1.3214 22 6 2.3156 -6.0831 -0.4850 23 6 1.9144 -5.6690 -1.9107 24 1 1.7258 -6.5123 -2.5751 25 8 2.7816 -4.6909 -2.4881 26 6 0.6379 -5.0731 -1.2940 27 1 -0.3632 -0.1248 -1.0200 28 1 -0.3633 -0.8209 0.6182 29 1 -0.3632 0.9458 0.4020 30 1 1.6584 2.1290 -0.0007 31 1 4.5119 2.8177 -1.0279 32 1 3.7384 3.2611 0.5127 33 1 5.2833 2.3768 0.5145 34 1 6.1467 0.7421 -0.7240 35 1 7.2247 0.3935 1.3786 36 1 5.9408 -2.6821 0.5328 37 1 5.9642 -2.0445 -1.8149 38 1 4.1491 -2.1305 -0.0078 39 1 3.0994 -3.6437 0.2992 40 1 1.1215 -3.4408 2.2484 41 1 -0.1916 -3.9888 4.2581 42 1 -1.4044 -6.1276 4.3911 43 1 -1.3120 -7.7143 2.5103 44 1 -0.0066 -7.1622 0.4968 45 1 3.3758 -5.9457 -0.2725 46 1 1.9493 -7.0685 -0.1972 47 1 3.5862 -5.0596 -2.8776 48 1 -0.1871 -5.7825 -1.2274 49 1 0.3424 -4.1205 -1.7338 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_9599494.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:39 Heat of formation + Delta-G solvation = -20.852269 kcal Electronic energy + Delta-G solvation = -32792.182626 eV Core-core repulsion = 28651.961600 eV Total energy + Delta-G solvation = -4140.221026 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.25516 -41.04995 -39.45401 -39.14143 -37.60881 -36.29086 -34.52971 -34.35302 -32.98307 -31.66337 -31.58479 -29.30839 -28.50386 -27.01484 -25.92680 -25.30138 -23.70053 -23.48295 -22.72972 -22.13091 -20.80143 -20.19545 -18.75953 -18.54142 -18.47828 -17.92192 -17.31921 -16.65032 -16.42700 -16.35460 -16.08740 -15.91025 -15.50156 -15.36456 -15.09983 -14.92083 -14.83217 -14.64078 -14.43400 -14.23924 -14.02798 -13.87252 -13.78522 -13.54426 -13.42160 -13.23734 -13.07328 -12.93787 -12.80672 -12.62708 -12.48843 -12.36954 -12.15235 -12.01689 -11.88422 -11.84201 -11.44345 -11.05788 -10.44130 -10.35073 -10.02814 -9.83914 -9.73890 -9.54446 -9.49674 -5.07243 -0.14290 0.21994 0.47640 0.58004 1.18665 1.54411 1.87046 1.88342 2.06071 2.72325 2.83930 3.00383 3.30716 3.38093 3.50380 3.59719 3.63895 3.67810 3.77765 3.82848 3.91549 4.07647 4.13997 4.15841 4.20194 4.27619 4.32185 4.39857 4.53235 4.55253 4.58635 4.59486 4.65752 4.66795 4.73123 4.78994 4.80050 4.92460 4.94167 5.00159 5.07815 5.11642 5.13037 5.15298 5.17768 5.35062 5.47859 5.52003 5.61597 5.62897 5.70103 5.83254 5.86982 6.14814 6.51271 6.55646 6.57582 7.30488 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C -0.009 4.009 3 C -0.132 4.132 4 C -0.025 4.025 5 C -0.125 4.125 6 C -0.093 4.093 7 C -0.067 4.067 8 O -0.543 6.543 9 Si 0.676 3.324 10 C -0.077 4.077 11 C -0.143 4.143 12 C 0.566 3.434 13 O -0.516 6.516 14 N -0.700 5.700 15 C 0.199 3.801 16 C -0.076 4.076 17 C -0.097 4.097 18 C -0.118 4.118 19 C -0.120 4.120 20 C -0.118 4.118 21 C -0.114 4.114 22 C -0.166 4.166 23 C 0.079 3.921 24 H 0.075 0.925 25 O -0.545 6.545 26 C -0.125 4.125 27 H 0.078 0.922 28 H 0.096 0.904 29 H 0.060 0.940 30 H 0.134 0.866 31 H 0.075 0.925 32 H 0.071 0.929 33 H 0.083 0.917 34 H 0.075 0.925 35 H 0.381 0.619 36 H -0.251 1.251 37 H -0.250 1.250 38 H 0.121 0.879 39 H 0.399 0.601 40 H 0.114 0.886 41 H 0.120 0.880 42 H 0.122 0.878 43 H 0.123 0.877 44 H 0.122 0.878 45 H 0.080 0.920 46 H 0.108 0.892 47 H 0.379 0.621 48 H 0.106 0.894 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.184 -1.204 -1.011 6.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C -0.010 4.010 3 C -0.150 4.150 4 C -0.025 4.025 5 C -0.182 4.182 6 C -0.093 4.093 7 C -0.178 4.178 8 O -0.349 6.349 9 Si 0.577 3.423 10 C -0.095 4.095 11 C -0.146 4.146 12 C 0.355 3.645 13 O -0.393 6.393 14 N -0.351 5.351 15 C 0.112 3.888 16 C -0.078 4.078 17 C -0.116 4.116 18 C -0.136 4.136 19 C -0.138 4.138 20 C -0.136 4.136 21 C -0.132 4.132 22 C -0.204 4.204 23 C 0.019 3.981 24 H 0.093 0.907 25 O -0.350 6.350 26 C -0.163 4.163 27 H 0.096 0.904 28 H 0.115 0.885 29 H 0.078 0.922 30 H 0.152 0.848 31 H 0.093 0.907 32 H 0.090 0.910 33 H 0.101 0.899 34 H 0.093 0.907 35 H 0.229 0.771 36 H -0.176 1.176 37 H -0.174 1.174 38 H 0.139 0.861 39 H 0.234 0.766 40 H 0.132 0.868 41 H 0.139 0.861 42 H 0.140 0.860 43 H 0.141 0.859 44 H 0.140 0.860 45 H 0.098 0.902 46 H 0.126 0.874 47 H 0.226 0.774 48 H 0.124 0.876 49 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 3.990 -1.604 -1.028 4.421 hybrid contribution 0.587 0.029 -0.046 0.590 sum 4.577 -1.575 -1.074 4.958 Atomic orbital electron populations 1.21110 0.89544 1.03256 1.03893 1.20099 0.97073 0.91186 0.92665 1.21031 0.93293 0.97877 1.02838 1.19990 0.93470 0.95102 0.93971 1.20976 1.01159 0.93310 1.02727 1.19034 0.93442 0.92687 1.04180 1.24596 0.93139 1.11194 0.88878 1.86518 1.26827 1.92801 1.28772 0.95383 0.90790 0.75927 0.80164 1.21037 0.93462 0.97142 0.97879 1.19605 0.92807 0.93422 1.08811 1.18099 0.87094 0.83200 0.76095 1.90756 1.13184 1.86860 1.48470 1.45396 1.11647 1.04285 1.73775 1.19835 0.92876 0.83764 0.92361 1.19784 0.98416 0.94741 0.94829 1.20923 0.98731 0.98817 0.93087 1.21167 0.97332 0.97081 0.98029 1.21186 0.99496 0.94313 0.98855 1.21115 0.99170 0.99666 0.93660 1.20856 0.97841 0.96182 0.98365 1.24095 1.00616 0.98293 0.97393 1.22750 0.91836 0.91162 0.92323 0.90688 1.86540 1.35622 1.35170 1.77687 1.23436 0.95627 1.03704 0.93518 0.90369 0.88531 0.92152 0.84803 0.90667 0.91011 0.89866 0.90711 0.77097 1.17625 1.17436 0.86143 0.76581 0.86810 0.86148 0.86022 0.85859 0.86030 0.90152 0.87358 0.77354 0.87582 0.88823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.40 8.72 36.01 0.31 -0.09 16 2 C -0.01 -0.04 5.91 -104.22 -0.62 -0.65 16 3 C -0.13 -0.33 9.31 -39.64 -0.37 -0.70 16 4 C -0.02 -0.06 5.89 -104.53 -0.62 -0.67 16 5 C -0.13 0.01 9.31 36.01 0.34 0.35 16 6 C -0.09 -0.24 5.29 -104.68 -0.55 -0.79 16 7 C -0.07 0.02 1.87 36.00 0.07 0.09 16 8 O -0.54 0.24 11.89 -35.23 -0.42 -0.18 16 9 Si 0.68 -0.97 30.18 -169.99 -5.13 -6.10 16 10 C -0.08 -0.25 8.11 -39.19 -0.32 -0.56 16 11 C -0.14 -0.61 5.87 -104.97 -0.62 -1.22 16 12 C 0.57 2.62 5.77 -12.33 -0.07 2.55 16 13 O -0.52 -3.41 11.32 5.31 0.06 -3.35 16 14 N -0.70 -1.84 3.78 -48.85 -0.18 -2.03 16 15 C 0.20 0.37 0.97 -132.16 -0.13 0.24 16 16 C -0.08 -0.22 5.14 -104.62 -0.54 -0.76 16 17 C -0.10 -0.38 8.79 -39.58 -0.35 -0.73 16 18 C -0.12 -0.36 10.05 -39.58 -0.40 -0.76 16 19 C -0.12 -0.26 10.05 -39.58 -0.40 -0.66 16 20 C -0.12 -0.20 10.05 -39.58 -0.40 -0.59 16 21 C -0.11 -0.19 8.41 -39.58 -0.33 -0.52 16 22 C -0.17 0.12 7.07 -25.92 -0.18 -0.06 16 23 C 0.08 -0.01 5.28 -25.92 -0.14 -0.15 16 24 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 25 O -0.55 -0.49 13.09 -35.23 -0.46 -0.95 16 26 C -0.13 -0.25 6.56 -25.92 -0.17 -0.42 16 27 H 0.08 0.28 8.14 -51.93 -0.42 -0.14 16 28 H 0.10 0.48 5.89 -51.93 -0.31 0.17 16 29 H 0.06 0.09 8.04 -51.93 -0.42 -0.32 16 30 H 0.13 0.06 8.05 -52.49 -0.42 -0.36 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.07 -0.05 8.08 -51.93 -0.42 -0.47 16 33 H 0.08 -0.01 6.18 -51.93 -0.32 -0.33 16 34 H 0.07 -0.14 7.37 -51.93 -0.38 -0.53 16 35 H 0.38 -2.06 8.74 45.56 0.40 -1.67 16 36 H -0.25 -0.22 6.75 56.52 0.38 0.16 16 37 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 38 H 0.12 0.26 3.34 -52.49 -0.18 0.08 16 39 H 0.40 0.60 6.89 -40.82 -0.28 0.31 16 40 H 0.11 0.51 6.16 -52.49 -0.32 0.18 16 41 H 0.12 0.20 8.06 -52.49 -0.42 -0.22 16 42 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 43 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 44 H 0.12 -0.08 6.74 -52.49 -0.35 -0.43 16 45 H 0.08 -0.10 8.13 -51.93 -0.42 -0.52 16 46 H 0.11 -0.22 6.78 -51.93 -0.35 -0.57 16 47 H 0.38 -1.19 9.12 45.56 0.42 -0.78 16 48 H 0.11 0.08 7.16 -51.92 -0.37 -0.29 16 49 H 0.09 0.47 6.64 -51.93 -0.34 0.13 16 LS Contribution 384.43 15.07 5.79 5.79 Total: 0.00 -8.71 384.43 -11.65 -20.36 By element: Atomic # 1 Polarization: -1.58 SS G_CDS: -5.83 Total: -7.42 kcal Atomic # 6 Polarization: -0.64 SS G_CDS: -5.47 Total: -6.12 kcal Atomic # 7 Polarization: -1.84 SS G_CDS: -0.18 Total: -2.03 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.82 Total: -4.49 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.13 Total: -6.10 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -8.71 -11.65 -20.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_9599494.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.496 kcal (2) G-P(sol) polarization free energy of solvation -8.708 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.204 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.649 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.357 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds