Wall clock time and date at job start Sat Mar 6 2021 23:52:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86303 * 109.47340 * 2 1 4 4 C 1.50710 * 109.47096 * 119.99674 * 2 1 3 5 5 C 1.34225 * 126.50159 * 255.02466 * 4 2 1 6 6 N 1.36835 * 109.93816 * 180.02562 * 5 4 2 7 7 C 1.46505 * 125.06569 * 180.02562 * 6 5 4 8 8 C 1.50699 * 109.46614 * 265.02382 * 7 6 5 9 9 O 1.21279 * 120.00395 * 359.97438 * 8 7 6 10 10 N 1.34778 * 119.99831 * 179.97438 * 8 7 6 11 11 C 1.46494 * 120.00451 * 185.22848 * 10 8 7 12 12 C 1.50705 * 112.90415 * 54.36536 * 11 10 8 13 13 C 1.38233 * 120.00230 * 215.71797 * 12 11 10 14 14 C 1.38234 * 119.99941 * 179.81724 * 13 12 11 15 15 C 1.38231 * 119.99911 * 0.39131 * 14 13 12 16 16 C 1.38237 * 120.00215 * 359.86485 * 15 14 13 17 17 C 1.38235 * 119.99922 * 359.94924 * 16 15 14 18 18 C 1.53954 * 113.61583 * 283.04570 * 11 10 8 19 19 C 1.53779 * 87.11063 * 270.83982 * 18 11 10 20 20 H 1.09001 * 113.68554 * 220.07612 * 19 18 11 21 21 O 1.42897 * 113.61569 * 89.18622 * 19 18 11 22 22 C 1.53777 * 113.61814 * 185.62019 * 11 10 8 23 23 C 1.37690 * 109.87478 * 0.26225 * 6 5 4 24 24 C 1.39079 * 133.51699 * 179.73449 * 23 6 5 25 25 C 1.37788 * 119.78323 * 180.02562 * 24 23 6 26 26 C 1.38795 * 120.66142 * 359.97438 * 25 24 23 27 27 C 1.36667 * 120.52883 * 359.58408 * 26 25 24 28 28 C 1.39586 * 119.76133 * 0.65025 * 27 26 25 29 29 H 0.96702 * 113.99672 * 59.99990 * 1 2 3 30 30 H 1.08994 * 109.47609 * 239.99882 * 2 1 3 31 31 H 1.48490 * 110.00022 * 298.67997 * 3 2 1 32 32 H 1.48497 * 110.00013 * 59.99974 * 3 2 1 33 33 H 1.08004 * 125.03738 * 359.97438 * 5 4 2 34 34 H 1.08994 * 109.46913 * 145.02156 * 7 6 5 35 35 H 1.09001 * 109.46938 * 25.02355 * 7 6 5 36 36 H 0.97007 * 119.99394 * 5.23177 * 10 8 7 37 37 H 1.08003 * 119.99864 * 359.97438 * 13 12 11 38 38 H 1.07997 * 119.99657 * 180.23366 * 14 13 12 39 39 H 1.08003 * 119.99684 * 179.83808 * 15 14 13 40 40 H 1.07995 * 119.99788 * 179.97438 * 16 15 14 41 41 H 1.07997 * 120.00164 * 180.02562 * 17 16 15 42 42 H 1.08998 * 113.53745 * 156.28540 * 18 11 10 43 43 H 1.09000 * 113.73977 * 25.42097 * 18 11 10 44 44 H 0.96707 * 113.99920 * 82.49797 * 21 19 18 45 45 H 1.08996 * 113.61287 * 334.56861 * 22 11 10 46 46 H 1.09007 * 113.61346 * 203.74933 * 22 11 10 47 47 H 1.08005 * 120.11072 * 359.97438 * 24 23 6 48 48 H 1.07994 * 119.67195 * 179.97438 * 25 24 23 49 49 H 1.08001 * 119.73009 * 179.97438 * 26 25 24 50 50 H 1.08004 * 120.11420 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.4603 -0.1376 2.3231 6 7 2.8030 -1.0990 3.2345 7 6 3.4071 -0.8403 4.5439 8 6 4.9055 -0.9606 4.4383 9 8 5.4183 -1.2358 3.3742 10 7 5.6758 -0.7624 5.5263 11 6 7.1354 -0.7659 5.4011 12 6 7.6374 0.2059 4.3643 13 6 8.7391 -0.1141 3.5931 14 6 9.1972 0.7758 2.6395 15 6 8.5586 1.9889 2.4628 16 6 7.4601 2.3111 3.2378 17 6 6.9996 1.4197 4.1887 18 6 7.7399 -2.1758 5.2704 19 6 7.8197 -2.1991 6.8060 20 1 8.7340 -2.6517 7.1900 21 8 6.6418 -2.7105 7.4327 22 6 7.8697 -0.6632 6.7483 23 6 2.5004 -2.3461 2.7355 24 6 2.6428 -3.6370 3.2330 25 6 2.2347 -4.7120 2.4738 26 6 1.6812 -4.5204 1.2155 27 6 1.5236 -3.2601 0.7110 28 6 1.9349 -2.1571 1.4610 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5138 -0.8899 31 1 1.5880 2.4585 -1.2242 32 1 1.5615 2.4679 1.2085 33 1 2.5962 0.9248 2.4621 34 1 3.0342 -1.5668 5.2659 35 1 3.1455 0.1655 4.8724 36 1 5.2637 -0.6175 6.3924 37 1 9.2403 -1.0603 3.7337 38 1 10.0556 0.5241 2.0344 39 1 8.9181 2.6852 1.7196 40 1 6.9615 3.2591 3.1000 41 1 6.1412 1.6713 4.7938 42 1 8.7143 -2.1880 4.7822 43 1 7.0504 -2.9123 4.8578 44 1 6.6046 -3.6760 7.4719 45 1 7.2839 -0.1778 7.5289 46 1 8.8798 -0.2620 6.6656 47 1 3.0728 -3.7965 4.2109 48 1 2.3465 -5.7137 2.8617 49 1 1.3667 -5.3739 0.6331 50 1 1.0925 -3.1188 -0.2692 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:43 Heat of formation + Delta-G solvation = 31.304914 kcal Electronic energy + Delta-G solvation = -35665.246066 eV Core-core repulsion = 31205.408554 eV Total energy + Delta-G solvation = -4459.837513 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.47262 -41.93940 -39.70596 -39.26107 -37.92034 -37.54254 -36.28957 -34.30863 -33.77512 -31.79965 -31.66602 -31.21096 -30.10345 -28.92603 -27.12337 -26.10923 -25.23687 -23.62213 -23.37176 -22.81893 -22.34622 -21.56156 -20.38476 -20.32496 -18.80142 -18.39936 -18.26831 -18.12247 -17.82221 -17.56766 -16.90540 -16.35694 -16.26940 -16.08324 -15.73795 -15.66466 -15.44873 -15.35325 -15.08589 -14.74593 -14.65324 -14.54293 -14.33605 -14.26492 -13.97686 -13.83356 -13.65337 -13.64337 -13.38177 -13.20744 -12.93599 -12.60850 -12.49165 -12.38438 -12.31567 -12.06277 -11.93531 -11.89404 -11.58650 -11.54852 -11.04157 -10.88116 -10.34394 -10.22943 -10.08620 -9.75551 -9.52755 -8.94413 -8.45102 -4.85360 0.34908 0.46852 0.56595 0.86560 1.39762 1.51066 1.54827 1.64947 1.73468 2.01510 2.17908 2.85371 2.87415 3.16331 3.39672 3.44789 3.52099 3.57136 3.64746 3.72911 3.75006 3.80572 3.92003 3.94108 4.07467 4.12576 4.14005 4.21811 4.26277 4.37252 4.41706 4.52361 4.53275 4.57203 4.62605 4.64598 4.76027 4.77251 4.86302 4.88107 4.93531 4.97263 5.05540 5.10480 5.17437 5.31784 5.41496 5.60783 5.68661 5.70991 5.75013 5.87096 5.92781 5.96508 6.13639 6.26917 6.40695 6.46360 6.51044 6.64720 7.18055 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.036 4.036 3 Si 0.677 3.323 4 C -0.151 4.151 5 C 0.073 3.927 6 N -0.463 5.463 7 C 0.091 3.909 8 C 0.493 3.507 9 O -0.498 6.498 10 N -0.700 5.700 11 C 0.202 3.798 12 C -0.067 4.067 13 C -0.108 4.108 14 C -0.116 4.116 15 C -0.119 4.119 16 C -0.117 4.117 17 C -0.107 4.107 18 C -0.173 4.173 19 C 0.080 3.920 20 H 0.074 0.926 21 O -0.550 6.550 22 C -0.125 4.125 23 C 0.111 3.889 24 C -0.126 4.126 25 C -0.098 4.098 26 C -0.146 4.146 27 C -0.066 4.066 28 C -0.085 4.085 29 H 0.375 0.625 30 H 0.071 0.929 31 H -0.259 1.259 32 H -0.255 1.255 33 H 0.167 0.833 34 H 0.117 0.883 35 H 0.120 0.880 36 H 0.406 0.594 37 H 0.123 0.877 38 H 0.122 0.878 39 H 0.121 0.879 40 H 0.121 0.879 41 H 0.113 0.887 42 H 0.102 0.898 43 H 0.081 0.919 44 H 0.384 0.616 45 H 0.086 0.914 46 H 0.112 0.888 47 H 0.114 0.886 48 H 0.124 0.876 49 H 0.122 0.878 50 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.758 0.691 3.757 5.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.147 4.147 3 Si 0.578 3.422 4 C -0.159 4.159 5 C -0.052 4.052 6 N -0.146 5.146 7 C -0.035 4.035 8 C 0.276 3.724 9 O -0.370 6.370 10 N -0.353 5.353 11 C 0.115 3.885 12 C -0.068 4.068 13 C -0.127 4.127 14 C -0.134 4.134 15 C -0.137 4.137 16 C -0.135 4.135 17 C -0.125 4.125 18 C -0.212 4.212 19 C 0.020 3.980 20 H 0.092 0.908 21 O -0.356 6.356 22 C -0.162 4.162 23 C 0.006 3.994 24 C -0.146 4.146 25 C -0.117 4.117 26 C -0.165 4.165 27 C -0.084 4.084 28 C -0.090 4.090 29 H 0.222 0.778 30 H 0.089 0.911 31 H -0.184 1.184 32 H -0.179 1.179 33 H 0.184 0.816 34 H 0.135 0.865 35 H 0.138 0.862 36 H 0.242 0.758 37 H 0.141 0.859 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.131 0.869 42 H 0.120 0.880 43 H 0.100 0.900 44 H 0.232 0.768 45 H 0.104 0.896 46 H 0.130 0.870 47 H 0.132 0.868 48 H 0.142 0.858 49 H 0.140 0.860 50 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 3.991 1.757 3.880 5.837 hybrid contribution -1.109 -0.622 -0.135 1.279 sum 2.882 1.135 3.745 4.860 Atomic orbital electron populations 1.86644 1.18368 1.79989 1.49343 1.23997 0.83753 1.09723 0.97186 0.95078 0.91882 0.74766 0.80493 1.19393 1.08746 0.91614 0.96116 1.21477 1.00923 0.93902 0.88861 1.43174 1.52566 1.04574 1.14327 1.21583 0.91089 1.05694 0.85103 1.20895 0.89152 0.77724 0.84582 1.90822 1.74220 1.44294 1.27675 1.45530 1.04856 1.74083 1.10876 1.19822 0.80168 0.94243 0.94273 1.19552 0.95956 0.94405 0.96927 1.21005 0.96590 0.99351 0.95714 1.21138 1.00032 0.94199 0.98032 1.21176 0.96087 0.97005 0.99437 1.21116 0.96897 0.99453 0.96049 1.20826 0.99501 0.93732 0.98466 1.24200 1.02526 0.97206 0.97253 1.22692 0.88246 0.95063 0.91979 0.90774 1.86386 1.41672 1.26687 1.80860 1.23408 1.02049 0.95214 0.95548 1.18135 1.01208 0.85854 0.94167 1.19941 1.04888 0.89221 1.00575 1.20798 0.98586 0.97869 0.94477 1.20646 1.02540 0.96831 0.96515 1.20258 0.98112 0.90946 0.99093 1.18931 1.03236 0.92724 0.94076 0.77806 0.91059 1.18380 1.17935 0.81569 0.86544 0.86220 0.75834 0.85923 0.85973 0.86048 0.86115 0.86872 0.87987 0.90015 0.76769 0.89561 0.87023 0.86766 0.85812 0.86013 0.86165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.68 12.86 -35.23 -0.45 -2.13 16 2 C -0.04 -0.08 3.05 36.01 0.11 0.03 16 3 Si 0.68 0.42 30.79 -169.99 -5.23 -4.81 16 4 C -0.15 -0.63 5.61 -102.71 -0.58 -1.21 16 5 C 0.07 0.21 9.89 -16.73 -0.17 0.04 16 6 N -0.46 -1.21 2.27 -115.71 -0.26 -1.47 16 7 C 0.09 -0.09 6.48 -5.19 -0.03 -0.12 16 8 C 0.49 0.40 7.12 -10.98 -0.08 0.32 16 9 O -0.50 -2.57 15.43 5.56 0.09 -2.48 16 10 N -0.70 0.94 4.15 -47.84 -0.20 0.74 16 11 C 0.20 -0.13 0.89 -132.07 -0.12 -0.24 16 12 C -0.07 -0.07 3.95 -104.62 -0.41 -0.49 16 13 C -0.11 -0.14 9.28 -39.58 -0.37 -0.50 16 14 C -0.12 -0.14 10.05 -39.59 -0.40 -0.53 16 15 C -0.12 -0.13 10.05 -39.58 -0.40 -0.52 16 16 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 17 C -0.11 -0.12 8.94 -39.58 -0.35 -0.48 16 18 C -0.17 0.13 6.79 -25.83 -0.18 -0.05 16 19 C 0.08 -0.18 5.28 -25.92 -0.14 -0.32 16 20 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 21 O -0.55 1.15 13.08 -35.23 -0.46 0.69 16 22 C -0.12 0.27 7.16 -25.92 -0.19 0.09 16 23 C 0.11 0.50 6.80 -83.99 -0.57 -0.07 16 24 C -0.13 -0.42 9.99 -39.43 -0.39 -0.81 16 25 C -0.10 -0.27 10.01 -39.54 -0.40 -0.67 16 26 C -0.15 -0.47 9.97 -39.94 -0.40 -0.87 16 27 C -0.07 -0.29 10.05 -39.65 -0.40 -0.69 16 28 C -0.09 -0.46 6.35 -105.14 -0.67 -1.12 16 29 H 0.37 -0.42 8.74 45.56 0.40 -0.02 16 30 H 0.07 0.09 7.96 -51.93 -0.41 -0.32 16 31 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 32 H -0.25 -0.68 7.04 56.52 0.40 -0.28 16 33 H 0.17 0.06 6.30 -52.48 -0.33 -0.27 16 34 H 0.12 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.12 -0.46 8.12 -51.93 -0.42 -0.88 16 36 H 0.41 -1.35 8.61 -40.82 -0.35 -1.70 16 37 H 0.12 -0.03 5.67 -52.48 -0.30 -0.32 16 38 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 39 H 0.12 -0.08 8.06 -52.48 -0.42 -0.50 16 40 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 41 H 0.11 -0.02 7.74 -52.49 -0.41 -0.42 16 42 H 0.10 -0.14 5.66 -51.93 -0.29 -0.44 16 43 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 44 H 0.38 -1.93 9.12 45.56 0.42 -1.52 16 45 H 0.09 -0.21 8.10 -51.93 -0.42 -0.63 16 46 H 0.11 -0.32 8.09 -51.92 -0.42 -0.74 16 47 H 0.11 0.16 8.06 -52.48 -0.42 -0.26 16 48 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 49 H 0.12 0.14 8.06 -52.49 -0.42 -0.29 16 50 H 0.12 0.37 8.06 -52.48 -0.42 -0.05 16 LS Contribution 415.43 15.07 6.26 6.26 Total: 0.00 -11.11 415.43 -12.75 -23.86 By element: Atomic # 1 Polarization: -5.95 SS G_CDS: -5.97 Total: -11.93 kcal Atomic # 6 Polarization: -2.22 SS G_CDS: -6.51 Total: -8.73 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -0.46 Total: -0.73 kcal Atomic # 8 Polarization: -3.09 SS G_CDS: -0.83 Total: -3.92 kcal Atomic # 14 Polarization: 0.42 SS G_CDS: -5.23 Total: -4.81 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -11.11 -12.75 -23.86 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.164 kcal (2) G-P(sol) polarization free energy of solvation -11.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.052 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.747 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds