Wall clock time and date at job start Sat Mar 6 2021 23:52:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.42905 * 109.46722 * 2 1 4 4 C 1.35900 * 116.99738 * 275.31661 * 3 2 1 5 5 C 1.38732 * 120.05818 * 5.09110 * 4 3 2 6 6 C 1.38151 * 119.94488 * 179.69499 * 5 4 3 7 7 C 1.38265 * 120.05104 * 0.59436 * 6 5 4 8 8 C 1.50703 * 119.93923 * 179.69859 * 7 6 5 9 9 O 1.42898 * 109.46593 * 119.98366 * 8 7 6 10 10 Si 1.86298 * 109.47387 * 359.97438 * 8 7 6 11 11 C 1.38261 * 120.11516 * 359.67945 * 7 6 5 12 12 C 1.38144 * 120.05526 * 0.02562 * 11 7 6 13 13 C 1.50693 * 109.47137 * 119.99570 * 2 1 3 14 14 O 1.21284 * 120.00244 * 245.00367 * 13 2 1 15 15 N 1.34785 * 120.00069 * 65.00051 * 13 2 1 16 16 C 1.46492 * 119.99987 * 180.27386 * 15 13 2 17 17 H 1.09003 * 109.47187 * 34.72972 * 16 15 13 18 18 C 1.53003 * 109.47141 * 154.72987 * 16 15 13 19 19 C 1.52998 * 109.47281 * 59.99371 * 18 16 15 20 20 C 1.53006 * 109.46479 * 60.00730 * 19 18 16 21 21 H 1.08993 * 109.47466 * 59.99872 * 20 19 18 22 22 O 1.42906 * 109.47016 * 180.02562 * 20 19 18 23 23 C 1.53007 * 109.47059 * 299.99391 * 20 19 18 24 24 C 1.52997 * 109.46589 * 60.00536 * 23 20 19 25 25 H 1.08999 * 109.47042 * 60.00685 * 1 2 3 26 26 H 1.09002 * 109.46810 * 180.02562 * 1 2 3 27 27 H 1.08993 * 109.47166 * 300.00221 * 1 2 3 28 28 H 1.09001 * 109.47434 * 239.99858 * 2 1 3 29 29 H 1.08001 * 120.02394 * 359.97438 * 5 4 3 30 30 H 1.07997 * 119.97346 * 180.27505 * 6 5 4 31 31 H 1.09000 * 109.46834 * 239.97992 * 8 7 6 32 32 H 0.96703 * 114.00308 * 299.99218 * 9 8 7 33 33 H 1.48499 * 109.99944 * 180.02562 * 10 8 7 34 34 H 1.48506 * 109.99764 * 301.32093 * 10 8 7 35 35 H 1.08001 * 119.97222 * 179.97438 * 11 7 6 36 36 H 1.08004 * 120.03201 * 179.97438 * 12 11 7 37 37 H 0.97002 * 119.99329 * 0.02562 * 15 13 2 38 38 H 1.08994 * 109.47552 * 180.02562 * 18 16 15 39 39 H 1.09005 * 109.46997 * 300.00227 * 18 16 15 40 40 H 1.09002 * 109.47445 * 180.02562 * 19 18 16 41 41 H 1.08994 * 109.47699 * 300.00978 * 19 18 16 42 42 H 0.96702 * 113.99791 * 180.02562 * 22 20 19 43 43 H 1.08993 * 109.46949 * 180.02562 * 23 20 19 44 44 H 1.08993 * 109.47375 * 300.00537 * 23 20 19 45 45 H 1.09002 * 109.47057 * 180.02562 * 24 23 20 46 46 H 1.08999 * 109.47914 * 59.99838 * 24 23 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3474 0.0000 4 6 2.1061 1.9664 -1.2057 5 6 1.6545 1.3303 -2.3529 6 6 1.7513 1.9643 -3.5765 7 6 2.3090 3.2268 -3.6600 8 6 2.4196 3.9133 -4.9970 9 8 1.6856 5.1389 -4.9651 10 14 1.7226 2.8060 -6.3232 11 6 2.7650 3.8605 -2.5189 12 6 2.6649 3.2333 -1.2922 13 6 2.0323 -0.7103 1.2305 14 8 2.6529 -0.0977 2.0734 15 7 1.7919 -2.0264 1.3943 16 6 2.2750 -2.7155 2.5933 17 1 2.2280 -2.0378 3.4457 18 6 1.3985 -3.9396 2.8660 19 6 1.4644 -4.8908 1.6695 20 6 2.9115 -5.3380 1.4527 21 1 3.2709 -5.8508 2.3447 22 8 2.9732 -6.2260 0.3347 23 6 3.7881 -4.1139 1.1799 24 6 3.7221 -3.1627 2.3764 25 1 -0.3633 0.5137 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8899 28 1 1.8934 -0.5138 -0.8900 29 1 1.2235 0.3421 -2.2888 30 1 1.3959 1.4714 -4.4693 31 1 3.4674 4.1227 -5.2123 32 1 0.7433 5.0284 -4.7783 33 1 1.8264 3.4714 -7.6467 34 1 2.4570 1.5154 -6.3451 35 1 3.2006 4.8465 -2.5868 36 1 3.0216 3.7285 -0.4011 37 1 1.2958 -2.5163 0.7199 38 1 1.7577 -4.4521 3.7584 39 1 0.3676 -3.6211 3.0205 40 1 0.8396 -5.7627 1.8636 41 1 1.1050 -4.3781 0.7774 42 1 3.8629 -6.5505 0.1388 43 1 4.8188 -4.4325 1.0250 44 1 3.4286 -3.6011 0.2878 45 1 4.3462 -2.2904 2.1819 46 1 4.0815 -3.6754 3.2686 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_10157680.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:50 Heat of formation + Delta-G solvation = -129.182765 kcal Electronic energy + Delta-G solvation = -27676.403670 eV Core-core repulsion = 23725.707451 eV Total energy + Delta-G solvation = -3950.696219 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.89566 -41.07686 -39.78941 -38.87056 -37.22012 -36.96023 -34.49524 -33.10302 -32.06426 -31.88859 -31.53656 -29.78106 -26.73907 -25.57833 -24.21825 -23.94787 -23.32308 -22.54045 -21.65883 -20.37019 -19.51528 -18.79573 -18.33377 -18.12358 -17.06423 -16.93831 -16.88581 -16.64716 -16.23080 -16.01104 -15.75232 -15.58994 -15.42594 -15.12143 -14.69327 -14.67616 -14.41633 -14.20580 -14.10981 -14.06226 -13.67360 -13.56489 -13.45296 -13.36759 -13.01013 -12.94912 -12.38726 -12.35522 -12.13921 -12.13738 -12.04700 -11.89049 -11.68735 -11.37999 -10.90265 -10.80988 -10.42582 -10.18806 -10.04699 -9.19709 -5.06497 0.28577 0.29323 1.28997 1.46652 1.47841 1.60267 1.95731 2.45387 2.66062 3.02737 3.35417 3.47205 3.48863 3.52322 3.56358 3.66586 3.71021 3.81550 3.85894 3.87501 3.90251 4.02791 4.17258 4.21508 4.23561 4.28640 4.34595 4.41358 4.44645 4.49563 4.50943 4.65554 4.66527 4.83951 4.87285 4.90055 4.91018 4.94885 4.96430 5.07883 5.16268 5.16705 5.25303 5.36279 5.50150 5.68664 6.22446 6.37651 6.57067 6.58421 7.07990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.065 3.935 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.208 4.208 6 C -0.076 4.076 7 C -0.158 4.158 8 C -0.063 4.063 9 O -0.541 6.541 10 Si 0.686 3.314 11 C -0.051 4.051 12 C -0.146 4.146 13 C 0.519 3.481 14 O -0.512 6.512 15 N -0.720 5.720 16 C 0.145 3.855 17 H 0.095 0.905 18 C -0.126 4.126 19 C -0.114 4.114 20 C 0.103 3.897 21 H 0.058 0.942 22 O -0.569 6.569 23 C -0.151 4.151 24 C -0.131 4.131 25 H 0.079 0.921 26 H 0.079 0.921 27 H 0.077 0.923 28 H 0.099 0.901 29 H 0.133 0.867 30 H 0.129 0.871 31 H 0.113 0.887 32 H 0.379 0.621 33 H -0.255 1.255 34 H -0.259 1.259 35 H 0.134 0.866 36 H 0.135 0.865 37 H 0.400 0.600 38 H 0.085 0.915 39 H 0.079 0.921 40 H 0.077 0.923 41 H 0.067 0.933 42 H 0.380 0.620 43 H 0.066 0.934 44 H 0.069 0.931 45 H 0.073 0.927 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.573 -4.717 -0.481 5.937 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.005 3.995 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.227 4.227 6 C -0.093 4.093 7 C -0.158 4.158 8 C -0.174 4.174 9 O -0.346 6.346 10 Si 0.589 3.411 11 C -0.069 4.069 12 C -0.165 4.165 13 C 0.304 3.696 14 O -0.385 6.385 15 N -0.375 5.375 16 C 0.041 3.959 17 H 0.113 0.887 18 C -0.164 4.164 19 C -0.152 4.152 20 C 0.044 3.956 21 H 0.076 0.924 22 O -0.375 6.375 23 C -0.189 4.189 24 C -0.169 4.169 25 H 0.098 0.902 26 H 0.098 0.902 27 H 0.096 0.904 28 H 0.117 0.883 29 H 0.151 0.849 30 H 0.146 0.854 31 H 0.130 0.870 32 H 0.226 0.774 33 H -0.180 1.180 34 H -0.184 1.184 35 H 0.152 0.848 36 H 0.153 0.847 37 H 0.236 0.764 38 H 0.103 0.897 39 H 0.098 0.902 40 H 0.095 0.905 41 H 0.086 0.914 42 H 0.227 0.773 43 H 0.085 0.915 44 H 0.088 0.912 45 H 0.092 0.908 46 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -2.962 -4.264 -0.540 5.220 hybrid contribution 0.897 -0.371 -0.095 0.976 sum -2.065 -4.635 -0.635 5.114 Atomic orbital electron populations 1.22356 0.92203 1.03947 1.04972 1.22205 0.96031 0.83234 0.98009 1.86233 1.80873 1.25414 1.27043 1.19087 0.95114 0.92823 0.83975 1.21210 1.07357 1.01708 0.92421 1.20786 0.97394 0.94170 0.96982 1.20245 1.03504 0.95739 0.96337 1.24973 1.00148 0.92335 0.99957 1.86501 1.24816 1.29000 1.94313 0.94817 0.90766 0.77766 0.77765 1.20853 0.96116 0.99347 0.90560 1.20544 1.03287 0.93601 0.99042 1.20076 0.79946 0.82175 0.87440 1.90774 1.38749 1.65765 1.43226 1.46000 1.58437 1.08708 1.24358 1.21019 0.93277 0.93615 0.87978 0.88701 1.21827 1.00794 0.94872 0.98861 1.21482 0.95572 0.99739 0.98416 1.21841 0.95879 0.89189 0.88687 0.92439 1.86507 1.34704 1.65363 1.50914 1.22247 1.00351 0.96947 0.99320 1.21899 0.96585 0.99723 0.98721 0.90162 0.90218 0.90382 0.88349 0.84947 0.85351 0.86998 0.77389 1.17993 1.18397 0.84781 0.84688 0.76361 0.89651 0.90197 0.90474 0.91444 0.77250 0.91484 0.91202 0.90820 0.90461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.45 9.12 37.16 0.34 0.79 16 2 C 0.07 -0.02 2.64 -27.88 -0.07 -0.09 16 3 O -0.28 -0.84 9.34 -39.29 -0.37 -1.20 16 4 C 0.14 0.25 6.60 -39.22 -0.26 -0.01 16 5 C -0.21 0.03 8.24 -39.43 -0.32 -0.29 16 6 C -0.08 0.04 8.66 -39.60 -0.34 -0.31 16 7 C -0.16 -0.05 5.39 -104.60 -0.56 -0.62 16 8 C -0.06 0.01 2.82 36.01 0.10 0.11 16 9 O -0.54 -0.18 12.77 -35.23 -0.45 -0.63 16 10 Si 0.69 -0.75 29.78 -169.99 -5.06 -5.82 16 11 C -0.05 -0.05 9.60 -39.61 -0.38 -0.43 16 12 C -0.15 -0.28 9.99 -39.43 -0.39 -0.67 16 13 C 0.52 0.76 7.15 -10.99 -0.08 0.68 16 14 O -0.51 -3.14 16.17 -14.31 -0.23 -3.37 16 15 N -0.72 1.17 4.19 -53.81 -0.23 0.95 16 16 C 0.15 -0.21 2.78 -67.93 -0.19 -0.40 16 17 H 0.09 0.02 7.57 -51.93 -0.39 -0.37 16 18 C -0.13 0.40 5.61 -26.73 -0.15 0.25 16 19 C -0.11 0.29 5.40 -26.73 -0.14 0.14 16 20 C 0.10 -0.19 3.47 -26.72 -0.09 -0.28 16 21 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 22 O -0.57 0.28 13.32 -35.23 -0.47 -0.19 16 23 C -0.15 0.27 5.39 -26.73 -0.14 0.13 16 24 C -0.13 0.15 5.61 -26.73 -0.15 0.00 16 25 H 0.08 -0.24 6.91 -51.93 -0.36 -0.60 16 26 H 0.08 -0.38 7.92 -51.93 -0.41 -0.79 16 27 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.10 -0.24 6.31 -51.93 -0.33 -0.56 16 29 H 0.13 -0.34 5.43 -52.49 -0.29 -0.62 16 30 H 0.13 -0.32 4.87 -52.49 -0.26 -0.57 16 31 H 0.11 0.04 7.96 -51.93 -0.41 -0.37 16 32 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 33 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 34 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 35 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 36 H 0.14 0.20 8.06 -52.48 -0.42 -0.22 16 37 H 0.40 -1.55 6.65 -40.82 -0.27 -1.82 16 38 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 39 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.07 -0.19 6.50 -51.93 -0.34 -0.53 16 42 H 0.38 -1.48 9.08 45.56 0.41 -1.07 16 43 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 44 H 0.07 -0.08 7.60 -51.93 -0.39 -0.48 16 45 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 46 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 LS Contribution 365.01 15.07 5.50 5.50 Total: 0.00 -9.49 365.01 -10.22 -19.70 By element: Atomic # 1 Polarization: -7.89 SS G_CDS: -6.06 Total: -13.95 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -2.85 Total: -1.00 kcal Atomic # 7 Polarization: 1.17 SS G_CDS: -0.23 Total: 0.95 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -1.52 Total: -5.39 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.06 Total: -5.82 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -9.49 -10.22 -19.70 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_10157680.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.480 kcal (2) G-P(sol) polarization free energy of solvation -9.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.702 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.183 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds