Wall clock time and date at job start Sat Mar 6 2021 23:52:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.42905 * 109.46722 * 2 1 4 4 C 1.35900 * 116.99738 * 275.31661 * 3 2 1 5 5 C 1.38732 * 120.05818 * 5.09110 * 4 3 2 6 6 C 1.38151 * 119.94488 * 179.69499 * 5 4 3 7 7 C 1.38265 * 120.05104 * 0.59436 * 6 5 4 8 8 C 1.50703 * 119.93923 * 179.69859 * 7 6 5 9 9 O 1.42898 * 109.46593 * 119.98366 * 8 7 6 10 10 Si 1.86298 * 109.47387 * 359.97438 * 8 7 6 11 11 C 1.38261 * 120.11516 * 359.67945 * 7 6 5 12 12 C 1.38144 * 120.05526 * 0.02562 * 11 7 6 13 13 C 1.50693 * 109.47137 * 119.99570 * 2 1 3 14 14 O 1.21284 * 120.00244 * 245.00367 * 13 2 1 15 15 N 1.34785 * 120.00069 * 65.00051 * 13 2 1 16 16 C 1.46492 * 119.99987 * 180.27386 * 15 13 2 17 17 H 1.09003 * 109.47187 * 34.72972 * 16 15 13 18 18 C 1.53003 * 109.47141 * 154.72987 * 16 15 13 19 19 C 1.52998 * 109.47281 * 59.99371 * 18 16 15 20 20 C 1.53006 * 109.46479 * 60.00730 * 19 18 16 21 21 H 1.08993 * 109.47466 * 59.99872 * 20 19 18 22 22 O 1.42906 * 109.47016 * 180.02562 * 20 19 18 23 23 C 1.53007 * 109.47059 * 299.99391 * 20 19 18 24 24 C 1.52997 * 109.46589 * 60.00536 * 23 20 19 25 25 H 1.08999 * 109.47042 * 60.00685 * 1 2 3 26 26 H 1.09002 * 109.46810 * 180.02562 * 1 2 3 27 27 H 1.08993 * 109.47166 * 300.00221 * 1 2 3 28 28 H 1.09001 * 109.47434 * 239.99858 * 2 1 3 29 29 H 1.08001 * 120.02394 * 359.97438 * 5 4 3 30 30 H 1.07997 * 119.97346 * 180.27505 * 6 5 4 31 31 H 1.09000 * 109.46834 * 239.97992 * 8 7 6 32 32 H 0.96703 * 114.00308 * 299.99218 * 9 8 7 33 33 H 1.48499 * 109.99944 * 180.02562 * 10 8 7 34 34 H 1.48506 * 109.99764 * 301.32093 * 10 8 7 35 35 H 1.08001 * 119.97222 * 179.97438 * 11 7 6 36 36 H 1.08004 * 120.03201 * 179.97438 * 12 11 7 37 37 H 0.97002 * 119.99329 * 0.02562 * 15 13 2 38 38 H 1.08994 * 109.47552 * 180.02562 * 18 16 15 39 39 H 1.09005 * 109.46997 * 300.00227 * 18 16 15 40 40 H 1.09002 * 109.47445 * 180.02562 * 19 18 16 41 41 H 1.08994 * 109.47699 * 300.00978 * 19 18 16 42 42 H 0.96702 * 113.99791 * 180.02562 * 22 20 19 43 43 H 1.08993 * 109.46949 * 180.02562 * 23 20 19 44 44 H 1.08993 * 109.47375 * 300.00537 * 23 20 19 45 45 H 1.09002 * 109.47057 * 180.02562 * 24 23 20 46 46 H 1.08999 * 109.47914 * 59.99838 * 24 23 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3474 0.0000 4 6 2.1061 1.9664 -1.2057 5 6 1.6545 1.3303 -2.3529 6 6 1.7513 1.9643 -3.5765 7 6 2.3090 3.2268 -3.6600 8 6 2.4196 3.9133 -4.9970 9 8 1.6856 5.1389 -4.9651 10 14 1.7226 2.8060 -6.3232 11 6 2.7650 3.8605 -2.5189 12 6 2.6649 3.2333 -1.2922 13 6 2.0323 -0.7103 1.2305 14 8 2.6529 -0.0977 2.0734 15 7 1.7919 -2.0264 1.3943 16 6 2.2750 -2.7155 2.5933 17 1 2.2280 -2.0378 3.4457 18 6 1.3985 -3.9396 2.8660 19 6 1.4644 -4.8908 1.6695 20 6 2.9115 -5.3380 1.4527 21 1 3.2709 -5.8508 2.3447 22 8 2.9732 -6.2260 0.3347 23 6 3.7881 -4.1139 1.1799 24 6 3.7221 -3.1627 2.3764 25 1 -0.3633 0.5137 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8899 28 1 1.8934 -0.5138 -0.8900 29 1 1.2235 0.3421 -2.2888 30 1 1.3959 1.4714 -4.4693 31 1 3.4674 4.1227 -5.2123 32 1 0.7433 5.0284 -4.7783 33 1 1.8264 3.4714 -7.6467 34 1 2.4570 1.5154 -6.3451 35 1 3.2006 4.8465 -2.5868 36 1 3.0216 3.7285 -0.4011 37 1 1.2958 -2.5163 0.7199 38 1 1.7577 -4.4521 3.7584 39 1 0.3676 -3.6211 3.0205 40 1 0.8396 -5.7627 1.8636 41 1 1.1050 -4.3781 0.7774 42 1 3.8629 -6.5505 0.1388 43 1 4.8188 -4.4325 1.0250 44 1 3.4286 -3.6011 0.2878 45 1 4.3462 -2.2904 2.1819 46 1 4.0815 -3.6754 3.2686 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_10157680.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:49 Heat of formation + Delta-G solvation = -130.962388 kcal Electronic energy + Delta-G solvation = -27676.480840 eV Core-core repulsion = 23725.707451 eV Total energy + Delta-G solvation = -3950.773389 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.92500 -41.06449 -39.76362 -38.91035 -37.19831 -36.94292 -34.51337 -33.03645 -31.92215 -31.87638 -31.53838 -29.66882 -26.71376 -25.52465 -24.21885 -23.79365 -23.22585 -22.54455 -21.64466 -20.31209 -19.51313 -18.78780 -18.20247 -18.12364 -17.10861 -16.90005 -16.87789 -16.61693 -16.18981 -16.00785 -15.72632 -15.56697 -15.38321 -15.07439 -14.67939 -14.65812 -14.43410 -14.12364 -14.08840 -13.94600 -13.62172 -13.57101 -13.29664 -13.23131 -12.91673 -12.84103 -12.26366 -12.20703 -12.19408 -12.10155 -12.06017 -11.78837 -11.68525 -11.22176 -10.93285 -10.78082 -10.41339 -10.19247 -10.06795 -9.23818 -4.99371 0.24837 0.27672 1.33781 1.39787 1.49030 1.64153 1.98318 2.48265 2.63359 3.23418 3.42196 3.55332 3.61042 3.66682 3.68077 3.70906 3.82182 3.85505 3.92676 4.01212 4.02984 4.17859 4.26869 4.33376 4.35790 4.41460 4.47398 4.49462 4.56640 4.58778 4.63615 4.69730 4.85060 4.94423 4.95858 5.01700 5.07946 5.08487 5.12767 5.16782 5.23369 5.26303 5.28861 5.42199 5.47428 5.67947 6.23519 6.42158 6.79667 6.84600 7.07082 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.062 3.938 3 O -0.313 6.313 4 C 0.121 3.879 5 C -0.203 4.203 6 C -0.074 4.074 7 C -0.160 4.160 8 C -0.073 4.073 9 O -0.558 6.558 10 Si 0.782 3.218 11 C -0.059 4.059 12 C -0.166 4.166 13 C 0.516 3.484 14 O -0.569 6.569 15 N -0.702 5.702 16 C 0.143 3.857 17 H 0.075 0.925 18 C -0.115 4.115 19 C -0.114 4.114 20 C 0.103 3.897 21 H 0.062 0.938 22 O -0.586 6.586 23 C -0.144 4.144 24 C -0.128 4.128 25 H 0.090 0.910 26 H 0.108 0.892 27 H 0.060 0.940 28 H 0.124 0.876 29 H 0.161 0.839 30 H 0.154 0.846 31 H 0.103 0.897 32 H 0.395 0.605 33 H -0.303 1.303 34 H -0.282 1.282 35 H 0.134 0.866 36 H 0.126 0.874 37 H 0.415 0.585 38 H 0.093 0.907 39 H 0.089 0.911 40 H 0.076 0.924 41 H 0.073 0.927 42 H 0.392 0.608 43 H 0.069 0.931 44 H 0.065 0.935 45 H 0.046 0.954 46 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.003 -6.547 -1.529 8.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.003 3.997 3 O -0.226 6.226 4 C 0.076 3.924 5 C -0.221 4.221 6 C -0.092 4.092 7 C -0.161 4.161 8 C -0.183 4.183 9 O -0.366 6.366 10 Si 0.688 3.312 11 C -0.077 4.077 12 C -0.185 4.185 13 C 0.302 3.698 14 O -0.447 6.447 15 N -0.357 5.357 16 C 0.039 3.961 17 H 0.093 0.907 18 C -0.153 4.153 19 C -0.152 4.152 20 C 0.045 3.955 21 H 0.080 0.920 22 O -0.395 6.395 23 C -0.182 4.182 24 C -0.166 4.166 25 H 0.109 0.891 26 H 0.127 0.873 27 H 0.079 0.921 28 H 0.141 0.859 29 H 0.178 0.822 30 H 0.171 0.829 31 H 0.120 0.880 32 H 0.245 0.755 33 H -0.231 1.231 34 H -0.209 1.209 35 H 0.151 0.849 36 H 0.144 0.856 37 H 0.253 0.747 38 H 0.111 0.889 39 H 0.107 0.893 40 H 0.095 0.905 41 H 0.091 0.909 42 H 0.242 0.758 43 H 0.087 0.913 44 H 0.083 0.917 45 H 0.065 0.935 46 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -4.419 -6.126 -1.579 7.717 hybrid contribution 1.393 0.204 0.219 1.425 sum -3.026 -5.922 -1.360 6.788 Atomic orbital electron populations 1.22374 0.90225 1.05710 1.04639 1.22448 0.97435 0.82073 0.97773 1.86197 1.81461 1.27007 1.27984 1.19240 0.95803 0.92944 0.84433 1.21487 1.06418 1.02633 0.91567 1.21059 0.96618 0.93692 0.97802 1.20358 1.03392 0.96221 0.96091 1.25180 1.00037 0.92642 1.00402 1.86463 1.26323 1.29444 1.94372 0.93753 0.88970 0.74679 0.73804 1.20905 0.96566 0.99543 0.90713 1.20623 1.04349 0.94380 0.99152 1.20527 0.79069 0.82782 0.87426 1.90747 1.41518 1.67099 1.45303 1.45893 1.57446 1.07831 1.24487 1.21031 0.93723 0.93962 0.87371 0.90690 1.21763 1.00803 0.93683 0.99035 1.21498 0.95139 0.99801 0.98736 1.21875 0.96237 0.88852 0.88583 0.91977 1.86472 1.36093 1.65580 1.51316 1.22178 1.00659 0.96783 0.98545 1.21848 0.96293 0.98924 0.99580 0.89075 0.87349 0.92128 0.85888 0.82188 0.82927 0.87982 0.75502 1.23102 1.20860 0.84853 0.85639 0.74671 0.88870 0.89268 0.90487 0.90891 0.75803 0.91254 0.91665 0.93474 0.89583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.07 9.12 71.98 0.66 1.72 16 2 C 0.06 -0.04 2.64 29.85 0.08 0.04 16 3 O -0.31 -2.26 9.34 -73.44 -0.69 -2.95 16 4 C 0.12 0.53 6.60 22.51 0.15 0.68 16 5 C -0.20 0.31 8.24 22.37 0.18 0.50 16 6 C -0.07 0.17 8.66 22.26 0.19 0.37 16 7 C -0.16 -0.09 5.39 -19.85 -0.11 -0.20 16 8 C -0.07 0.02 2.82 71.24 0.20 0.22 16 9 O -0.56 -0.35 12.77 -148.98 -1.90 -2.25 16 10 Si 0.78 -2.42 29.78 68.60 2.04 -0.38 16 11 C -0.06 -0.20 9.60 22.25 0.21 0.01 16 12 C -0.17 -0.94 9.99 22.37 0.22 -0.72 16 13 C 0.52 2.01 7.15 87.65 0.63 2.64 16 14 O -0.57 -8.46 16.17 15.95 0.26 -8.21 16 15 N -0.70 2.31 4.19 -442.53 -1.86 0.46 16 16 C 0.14 -0.35 2.78 44.99 0.13 -0.22 16 17 H 0.07 0.16 7.57 -2.39 -0.02 0.14 16 18 C -0.12 0.84 5.61 30.59 0.17 1.01 16 19 C -0.11 0.73 5.40 30.60 0.17 0.89 16 20 C 0.10 -0.47 3.47 30.60 0.11 -0.37 16 21 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 22 O -0.59 1.20 13.32 -148.98 -1.98 -0.79 16 23 C -0.14 0.56 5.39 30.60 0.16 0.72 16 24 C -0.13 0.20 5.61 30.59 0.17 0.37 16 25 H 0.09 -0.73 6.91 -2.39 -0.02 -0.74 16 26 H 0.11 -1.32 7.92 -2.39 -0.02 -1.34 16 27 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 28 H 0.12 -0.77 6.31 -2.39 -0.02 -0.79 16 29 H 0.16 -1.26 5.43 -2.91 -0.02 -1.27 16 30 H 0.15 -1.16 4.87 -2.91 -0.01 -1.17 16 31 H 0.10 0.14 7.96 -2.39 -0.02 0.12 16 32 H 0.40 -2.98 8.70 -74.05 -0.64 -3.63 16 33 H -0.30 -1.50 7.11 99.48 0.71 -0.79 16 34 H -0.28 -0.23 7.11 99.48 0.71 0.48 16 35 H 0.13 0.33 8.06 -2.91 -0.02 0.31 16 36 H 0.13 0.78 8.06 -2.91 -0.02 0.76 16 37 H 0.41 -3.78 6.65 -92.71 -0.62 -4.40 16 38 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 39 H 0.09 -0.77 8.14 -2.38 -0.02 -0.78 16 40 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 41 H 0.07 -0.55 6.50 -2.39 -0.02 -0.56 16 42 H 0.39 -3.38 9.08 -74.06 -0.67 -4.05 16 43 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 44 H 0.06 -0.18 7.60 -2.39 -0.02 -0.20 16 45 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 46 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 Total: 0.00 -24.89 365.01 -1.68 -26.57 By element: Atomic # 1 Polarization: -19.26 SS G_CDS: -0.87 Total: -20.13 kcal Atomic # 6 Polarization: 4.35 SS G_CDS: 3.32 Total: 7.67 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -1.86 Total: 0.46 kcal Atomic # 8 Polarization: -9.88 SS G_CDS: -4.31 Total: -14.19 kcal Atomic # 14 Polarization: -2.42 SS G_CDS: 2.04 Total: -0.38 kcal Total: -24.89 -1.68 -26.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_10157680.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.392 kcal (2) G-P(sol) polarization free energy of solvation -24.894 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.286 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.570 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds