Wall clock time and date at job start Sat Mar 6 2021 23:52:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.35534 * 125.67397 * 2 1 4 4 C 1.35451 * 108.86900 * 180.26939 * 3 2 1 5 5 C 1.50701 * 126.07225 * 179.79107 * 4 3 2 6 6 O 1.42891 * 109.47402 * 119.97279 * 5 4 3 7 7 Si 1.86305 * 109.46773 * 359.96943 * 5 4 3 8 8 C 1.39837 * 107.86640 * 359.76744 * 4 3 2 9 9 C 1.37642 * 125.67978 * 179.87479 * 2 1 3 10 10 C 1.46682 * 126.23214 * 359.97438 * 9 2 1 11 11 O 1.21695 * 119.99957 * 4.41295 * 10 9 2 12 12 N 1.34776 * 120.00105 * 184.40807 * 10 9 2 13 13 C 1.46498 * 120.00045 * 174.41160 * 12 10 9 14 14 H 1.08997 * 109.47246 * 35.00448 * 13 12 10 15 15 C 1.53002 * 109.47296 * 155.00363 * 13 12 10 16 16 C 1.52998 * 109.47347 * 59.99578 * 15 13 12 17 17 C 1.53001 * 109.46835 * 60.00137 * 16 15 13 18 18 H 1.08998 * 109.46928 * 60.00308 * 17 16 15 19 19 O 1.42902 * 109.47159 * 179.97438 * 17 16 15 20 20 C 1.52996 * 109.47484 * 300.00244 * 17 16 15 21 21 C 1.53000 * 109.47270 * 275.00065 * 13 12 10 22 22 H 1.09000 * 109.47148 * 270.81760 * 1 2 3 23 23 H 1.09000 * 109.47550 * 30.81451 * 1 2 3 24 24 H 1.08999 * 109.47508 * 150.81778 * 1 2 3 25 25 H 1.07997 * 125.57052 * 359.97438 * 3 2 1 26 26 H 1.09000 * 109.47201 * 239.97896 * 5 4 3 27 27 H 0.96708 * 114.00251 * 300.00087 * 6 5 4 28 28 H 1.48500 * 109.99882 * 179.97438 * 7 5 4 29 29 H 1.48494 * 110.00127 * 301.32408 * 7 5 4 30 30 H 1.08004 * 126.45998 * 180.02562 * 8 4 3 31 31 H 0.97000 * 120.00056 * 354.41145 * 12 10 9 32 32 H 1.09005 * 109.46496 * 299.99986 * 15 13 12 33 33 H 1.08998 * 109.47470 * 179.97438 * 15 13 12 34 34 H 1.08998 * 109.47111 * 300.00557 * 16 15 13 35 35 H 1.08997 * 109.47273 * 179.97438 * 16 15 13 36 36 H 0.96699 * 113.99715 * 179.97438 * 19 17 16 37 37 H 1.08996 * 109.47445 * 180.02562 * 20 17 16 38 38 H 1.08998 * 109.47090 * 299.99965 * 20 17 16 39 39 H 1.09000 * 109.47240 * 59.99854 * 21 13 12 40 40 H 1.08998 * 109.47252 * 180.02562 * 21 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5520 0.7094 -0.0060 5 6 4.7536 1.6189 -0.0126 6 8 5.5453 1.3707 1.1508 7 14 4.1886 3.3942 -0.0121 8 6 3.5779 -0.6887 -0.0046 9 6 2.2678 -1.1180 0.0024 10 6 1.8124 -2.5124 0.0060 11 8 0.6246 -2.7647 -0.0740 12 7 2.7094 -3.5141 0.0979 13 6 2.2500 -4.8994 0.2248 14 1 1.3368 -5.0339 -0.3548 15 6 3.3316 -5.8455 -0.3005 16 6 4.6135 -5.6567 0.5130 17 6 4.3341 -5.9685 1.9846 18 1 3.9924 -6.9992 2.0791 19 8 5.5316 -5.7927 2.7444 20 6 3.2526 -5.0224 2.5100 21 6 1.9707 -5.2112 1.6964 22 1 -0.3633 0.0147 1.0276 23 1 -0.3634 0.8826 -0.5264 24 1 -0.3634 -0.8972 -0.5011 25 1 1.9081 2.1236 -0.0004 26 1 5.3493 1.4276 -0.9051 27 1 5.0781 1.5211 1.9840 28 1 5.3642 4.3014 -0.0179 29 1 3.3378 3.6568 -1.2005 30 1 4.4583 -1.3143 -0.0078 31 1 3.6591 -3.3178 0.0799 32 1 3.5305 -5.6233 -1.3490 33 1 2.9900 -6.8763 -0.2057 34 1 4.9552 -4.6260 0.4185 35 1 5.3838 -6.3311 0.1390 36 1 5.4282 -5.9733 3.6888 37 1 3.0539 -5.2442 3.5585 38 1 3.5943 -3.9917 2.4156 39 1 1.2002 -4.5372 2.0708 40 1 1.6293 -6.2420 1.7909 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_10803934.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:55 Heat of formation + Delta-G solvation = -71.876785 kcal Electronic energy + Delta-G solvation = -22939.292182 eV Core-core repulsion = 19528.100978 eV Total energy + Delta-G solvation = -3411.191205 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.55575 -41.02136 -39.25694 -37.68025 -36.95844 -34.46064 -33.58300 -31.98911 -31.18200 -29.48705 -28.27675 -25.73462 -24.27018 -23.87371 -23.03599 -21.37215 -20.60640 -20.17297 -18.91782 -18.26338 -17.73436 -16.96112 -16.83286 -16.77849 -16.32575 -15.80036 -15.72042 -15.41498 -15.21913 -14.98019 -14.57812 -14.36338 -14.12397 -14.06120 -14.00024 -13.49846 -13.37827 -13.28704 -13.18502 -12.90096 -12.29298 -12.27122 -12.19831 -11.89760 -11.82773 -11.29409 -10.98513 -10.81896 -10.32692 -10.11467 -9.67105 -9.23915 -5.01915 0.46035 1.35945 1.51862 1.58647 1.69399 2.02002 2.32660 2.39807 3.11407 3.53940 3.59424 3.60780 3.72331 3.79431 3.91463 3.95862 3.98667 4.10359 4.18954 4.25596 4.27560 4.31739 4.38034 4.42285 4.52126 4.65387 4.67800 4.74191 4.78641 4.91161 4.95130 5.00514 5.03175 5.16807 5.19317 5.24265 5.45901 5.68130 5.91056 6.12816 6.47528 6.65949 6.70884 7.19097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.404 5.404 3 C 0.026 3.974 4 C -0.207 4.207 5 C -0.031 4.031 6 O -0.543 6.543 7 Si 0.684 3.316 8 C -0.113 4.113 9 C -0.054 4.054 10 C 0.592 3.408 11 O -0.548 6.548 12 N -0.712 5.712 13 C 0.146 3.854 14 H 0.095 0.905 15 C -0.126 4.126 16 C -0.115 4.115 17 C 0.104 3.896 18 H 0.056 0.944 19 O -0.568 6.568 20 C -0.151 4.151 21 C -0.129 4.129 22 H 0.079 0.921 23 H 0.085 0.915 24 H 0.107 0.893 25 H 0.173 0.827 26 H 0.110 0.890 27 H 0.377 0.623 28 H -0.256 1.256 29 H -0.258 1.258 30 H 0.144 0.856 31 H 0.403 0.597 32 H 0.079 0.921 33 H 0.084 0.916 34 H 0.068 0.932 35 H 0.076 0.924 36 H 0.379 0.621 37 H 0.066 0.934 38 H 0.072 0.928 39 H 0.071 0.929 40 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.742 -0.144 2.262 2.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.076 5.076 3 C -0.111 4.111 4 C -0.214 4.214 5 C -0.143 4.143 6 O -0.348 6.348 7 Si 0.586 3.414 8 C -0.139 4.139 9 C -0.167 4.167 10 C 0.381 3.619 11 O -0.428 6.428 12 N -0.365 5.365 13 C 0.041 3.959 14 H 0.113 0.887 15 C -0.164 4.164 16 C -0.153 4.153 17 C 0.045 3.955 18 H 0.074 0.926 19 O -0.374 6.374 20 C -0.189 4.189 21 C -0.167 4.167 22 H 0.097 0.903 23 H 0.104 0.896 24 H 0.125 0.875 25 H 0.190 0.810 26 H 0.128 0.872 27 H 0.224 0.776 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.162 0.838 31 H 0.240 0.760 32 H 0.098 0.902 33 H 0.103 0.897 34 H 0.087 0.913 35 H 0.095 0.905 36 H 0.227 0.773 37 H 0.085 0.915 38 H 0.091 0.909 39 H 0.090 0.910 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -2.321 0.410 0.745 2.472 hybrid contribution 0.283 -0.472 0.257 0.608 sum -2.038 -0.062 1.002 2.272 Atomic orbital electron populations 1.22385 0.75561 1.05747 1.04259 1.43803 1.06989 1.04693 1.52070 1.21861 0.90071 0.91666 1.07497 1.19786 0.93701 0.94860 1.13044 1.24316 0.91872 1.07203 0.90862 1.86483 1.40609 1.92185 1.15496 0.95062 0.82870 0.75602 0.87873 1.21181 0.94272 0.94642 1.03794 1.20033 0.90278 0.87641 1.18795 1.16966 0.85600 0.83540 0.75818 1.90785 1.16243 1.84804 1.50933 1.45768 1.09878 1.06094 1.74731 1.21007 0.98396 0.79860 0.96590 0.88685 1.21824 0.94335 1.00097 1.00115 1.21488 0.97895 1.02858 0.93073 1.21823 0.84465 0.97548 0.91668 0.92554 1.86519 1.34312 1.92757 1.23784 1.22250 0.95637 1.01272 0.99771 1.21890 0.97630 1.02569 0.94637 0.90253 0.89638 0.87496 0.81027 0.87230 0.77570 1.18016 1.18259 0.83812 0.76041 0.90247 0.89703 0.91320 0.90509 0.77323 0.91545 0.90924 0.91014 0.90540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.04 10.65 59.85 0.64 0.60 16 2 N -0.40 -0.45 3.16 -120.24 -0.38 -0.83 16 3 C 0.03 0.00 9.94 -16.91 -0.17 -0.17 16 4 C -0.21 -0.12 5.44 -105.02 -0.57 -0.69 16 5 C -0.03 0.00 3.02 36.01 0.11 0.11 16 6 O -0.54 -0.33 12.88 -35.23 -0.45 -0.79 16 7 Si 0.68 -0.80 30.59 -169.99 -5.20 -6.00 16 8 C -0.11 -0.13 10.29 -39.12 -0.40 -0.54 16 9 C -0.05 -0.11 6.89 -81.98 -0.56 -0.67 16 10 C 0.59 1.51 7.74 -12.85 -0.10 1.41 16 11 O -0.55 -2.79 14.26 5.19 0.07 -2.72 16 12 N -0.71 0.00 4.22 -55.11 -0.23 -0.24 16 13 C 0.15 -0.09 2.83 -67.93 -0.19 -0.29 16 14 H 0.10 0.07 7.50 -51.93 -0.39 -0.32 16 15 C -0.13 0.27 5.61 -26.73 -0.15 0.12 16 16 C -0.12 0.15 5.40 -26.73 -0.14 0.00 16 17 C 0.10 -0.10 3.47 -26.73 -0.09 -0.19 16 18 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 19 O -0.57 -0.24 13.32 -35.23 -0.47 -0.71 16 20 C -0.15 0.17 5.39 -26.73 -0.14 0.03 16 21 C -0.13 0.11 5.60 -26.73 -0.15 -0.04 16 22 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 23 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 24 H 0.11 0.12 6.19 -51.93 -0.32 -0.20 16 25 H 0.17 -0.50 6.19 -52.49 -0.32 -0.82 16 26 H 0.11 0.07 7.96 -51.93 -0.41 -0.34 16 27 H 0.38 -1.16 8.70 45.56 0.40 -0.77 16 28 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 29 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 30 H 0.14 -0.01 7.45 -52.48 -0.39 -0.40 16 31 H 0.40 -0.50 5.77 -40.82 -0.24 -0.74 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 34 H 0.07 -0.07 6.51 -51.93 -0.34 -0.41 16 35 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.38 -1.20 9.08 45.56 0.41 -0.78 16 37 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 38 H 0.07 0.00 7.60 -51.93 -0.39 -0.39 16 39 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 LS Contribution 321.12 15.07 4.84 4.84 Total: 0.00 -8.16 321.12 -8.75 -16.91 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -5.00 Total: -10.14 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -1.93 Total: -0.34 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: -0.61 Total: -1.06 kcal Atomic # 8 Polarization: -3.37 SS G_CDS: -0.85 Total: -4.21 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.20 Total: -6.00 kcal Total LS contribution 4.84 Total: 4.84 kcal Total: -8.16 -8.75 -16.91 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_10803934.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.964 kcal (2) G-P(sol) polarization free energy of solvation -8.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.755 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.913 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds