Wall clock time and date at job start Sat Mar 6 2021 23:52:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.35534 * 125.67397 * 2 1 4 4 C 1.35451 * 108.86900 * 180.26939 * 3 2 1 5 5 C 1.50701 * 126.07225 * 179.79107 * 4 3 2 6 6 O 1.42891 * 109.47402 * 119.97279 * 5 4 3 7 7 Si 1.86305 * 109.46773 * 359.96943 * 5 4 3 8 8 C 1.39837 * 107.86640 * 359.76744 * 4 3 2 9 9 C 1.37642 * 125.67978 * 179.87479 * 2 1 3 10 10 C 1.46682 * 126.23214 * 359.97438 * 9 2 1 11 11 O 1.21695 * 119.99957 * 4.41295 * 10 9 2 12 12 N 1.34776 * 120.00105 * 184.40807 * 10 9 2 13 13 C 1.46498 * 120.00045 * 174.41160 * 12 10 9 14 14 H 1.08997 * 109.47246 * 35.00448 * 13 12 10 15 15 C 1.53002 * 109.47296 * 155.00363 * 13 12 10 16 16 C 1.52998 * 109.47347 * 59.99578 * 15 13 12 17 17 C 1.53001 * 109.46835 * 60.00137 * 16 15 13 18 18 H 1.08998 * 109.46928 * 60.00308 * 17 16 15 19 19 O 1.42902 * 109.47159 * 179.97438 * 17 16 15 20 20 C 1.52996 * 109.47484 * 300.00244 * 17 16 15 21 21 C 1.53000 * 109.47270 * 275.00065 * 13 12 10 22 22 H 1.09000 * 109.47148 * 270.81760 * 1 2 3 23 23 H 1.09000 * 109.47550 * 30.81451 * 1 2 3 24 24 H 1.08999 * 109.47508 * 150.81778 * 1 2 3 25 25 H 1.07997 * 125.57052 * 359.97438 * 3 2 1 26 26 H 1.09000 * 109.47201 * 239.97896 * 5 4 3 27 27 H 0.96708 * 114.00251 * 300.00087 * 6 5 4 28 28 H 1.48500 * 109.99882 * 179.97438 * 7 5 4 29 29 H 1.48494 * 110.00127 * 301.32408 * 7 5 4 30 30 H 1.08004 * 126.45998 * 180.02562 * 8 4 3 31 31 H 0.97000 * 120.00056 * 354.41145 * 12 10 9 32 32 H 1.09005 * 109.46496 * 299.99986 * 15 13 12 33 33 H 1.08998 * 109.47470 * 179.97438 * 15 13 12 34 34 H 1.08998 * 109.47111 * 300.00557 * 16 15 13 35 35 H 1.08997 * 109.47273 * 179.97438 * 16 15 13 36 36 H 0.96699 * 113.99715 * 179.97438 * 19 17 16 37 37 H 1.08996 * 109.47445 * 180.02562 * 20 17 16 38 38 H 1.08998 * 109.47090 * 299.99965 * 20 17 16 39 39 H 1.09000 * 109.47240 * 59.99854 * 21 13 12 40 40 H 1.08998 * 109.47252 * 180.02562 * 21 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5520 0.7094 -0.0060 5 6 4.7536 1.6189 -0.0126 6 8 5.5453 1.3707 1.1508 7 14 4.1886 3.3942 -0.0121 8 6 3.5779 -0.6887 -0.0046 9 6 2.2678 -1.1180 0.0024 10 6 1.8124 -2.5124 0.0060 11 8 0.6246 -2.7647 -0.0740 12 7 2.7094 -3.5141 0.0979 13 6 2.2500 -4.8994 0.2248 14 1 1.3368 -5.0339 -0.3548 15 6 3.3316 -5.8455 -0.3005 16 6 4.6135 -5.6567 0.5130 17 6 4.3341 -5.9685 1.9846 18 1 3.9924 -6.9992 2.0791 19 8 5.5316 -5.7927 2.7444 20 6 3.2526 -5.0224 2.5100 21 6 1.9707 -5.2112 1.6964 22 1 -0.3633 0.0147 1.0276 23 1 -0.3634 0.8826 -0.5264 24 1 -0.3634 -0.8972 -0.5011 25 1 1.9081 2.1236 -0.0004 26 1 5.3493 1.4276 -0.9051 27 1 5.0781 1.5211 1.9840 28 1 5.3642 4.3014 -0.0179 29 1 3.3378 3.6568 -1.2005 30 1 4.4583 -1.3143 -0.0078 31 1 3.6591 -3.3178 0.0799 32 1 3.5305 -5.6233 -1.3490 33 1 2.9900 -6.8763 -0.2057 34 1 4.9552 -4.6260 0.4185 35 1 5.3838 -6.3311 0.1390 36 1 5.4282 -5.9733 3.6888 37 1 3.0539 -5.2442 3.5585 38 1 3.5943 -3.9917 2.4156 39 1 1.2002 -4.5372 2.0708 40 1 1.6293 -6.2420 1.7909 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_10803934.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:54 Heat of formation + Delta-G solvation = -73.530292 kcal Electronic energy + Delta-G solvation = -22939.363884 eV Core-core repulsion = 19528.100978 eV Total energy + Delta-G solvation = -3411.262906 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.59459 -41.04011 -39.32555 -37.68619 -36.97864 -34.49586 -33.61282 -31.91369 -31.20604 -29.46700 -28.25768 -25.75250 -24.29565 -23.79423 -23.01281 -21.40308 -20.64519 -20.16192 -18.93944 -18.21525 -17.77947 -16.94925 -16.87373 -16.82917 -16.30292 -15.84546 -15.72099 -15.39247 -15.21484 -14.99067 -14.61566 -14.43198 -14.09839 -14.09156 -13.94900 -13.49623 -13.30068 -13.26238 -13.14878 -12.83675 -12.27813 -12.23044 -12.20127 -11.93578 -11.78804 -11.22157 -11.15601 -10.77271 -10.33270 -10.19402 -9.70821 -9.27622 -4.94479 0.37682 1.39298 1.52165 1.58437 1.72371 2.04075 2.26049 2.32162 3.23717 3.56984 3.65708 3.68731 3.72718 3.82410 4.01784 4.02386 4.04328 4.17841 4.23251 4.34209 4.36016 4.38269 4.41869 4.47453 4.58998 4.65538 4.71710 4.75255 4.84495 4.95792 5.01535 5.09041 5.10838 5.17542 5.24974 5.29838 5.44374 5.64902 5.86082 6.15312 6.41640 6.86383 6.89077 7.08122 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.411 5.411 3 C 0.034 3.966 4 C -0.219 4.219 5 C -0.039 4.039 6 O -0.560 6.560 7 Si 0.781 3.219 8 C -0.115 4.115 9 C -0.078 4.078 10 C 0.588 3.412 11 O -0.581 6.581 12 N -0.702 5.702 13 C 0.144 3.856 14 H 0.081 0.919 15 C -0.116 4.116 16 C -0.116 4.116 17 C 0.104 3.896 18 H 0.067 0.933 19 O -0.588 6.588 20 C -0.144 4.144 21 C -0.124 4.124 22 H 0.086 0.914 23 H 0.111 0.889 24 H 0.085 0.915 25 H 0.202 0.798 26 H 0.100 0.900 27 H 0.393 0.607 28 H -0.304 1.304 29 H -0.281 1.281 30 H 0.150 0.850 31 H 0.409 0.591 32 H 0.082 0.918 33 H 0.098 0.902 34 H 0.063 0.937 35 H 0.075 0.925 36 H 0.393 0.607 37 H 0.073 0.927 38 H 0.059 0.941 39 H 0.051 0.949 40 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.752 0.064 2.588 3.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.083 5.083 3 C -0.103 4.103 4 C -0.225 4.225 5 C -0.150 4.150 6 O -0.368 6.368 7 Si 0.687 3.313 8 C -0.142 4.142 9 C -0.191 4.191 10 C 0.377 3.623 11 O -0.464 6.464 12 N -0.354 5.354 13 C 0.040 3.960 14 H 0.099 0.901 15 C -0.154 4.154 16 C -0.154 4.154 17 C 0.046 3.954 18 H 0.085 0.915 19 O -0.396 6.396 20 C -0.182 4.182 21 C -0.162 4.162 22 H 0.104 0.896 23 H 0.130 0.870 24 H 0.104 0.896 25 H 0.218 0.782 26 H 0.117 0.883 27 H 0.242 0.758 28 H -0.232 1.232 29 H -0.208 1.208 30 H 0.167 0.833 31 H 0.247 0.753 32 H 0.101 0.899 33 H 0.117 0.883 34 H 0.082 0.918 35 H 0.094 0.906 36 H 0.242 0.758 37 H 0.091 0.909 38 H 0.078 0.922 39 H 0.070 0.930 40 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -2.322 0.574 1.102 2.633 hybrid contribution 0.348 -0.528 0.166 0.653 sum -1.974 0.046 1.267 2.346 Atomic orbital electron populations 1.22454 0.74776 1.05924 1.04844 1.44024 1.07658 1.04736 1.51882 1.22324 0.89698 0.92538 1.05697 1.19904 0.94296 0.94639 1.13668 1.24505 0.91520 1.08422 0.90509 1.86442 1.41482 1.92377 1.16468 0.93938 0.79654 0.71950 0.85785 1.21358 0.94209 0.95311 1.03285 1.20091 0.90878 0.87743 1.20414 1.17175 0.85399 0.84247 0.75502 1.90761 1.17495 1.85311 1.52787 1.45748 1.09917 1.06075 1.73639 1.21061 0.98438 0.79785 0.96685 0.90129 1.21769 0.93333 1.00304 0.99997 1.21499 0.98124 1.02555 0.93185 1.21863 0.84025 0.97966 0.91573 0.91536 1.86483 1.35069 1.92924 1.25132 1.22169 0.95346 1.00539 1.00116 1.21835 0.97237 1.02831 0.94328 0.89556 0.87027 0.89625 0.78179 0.88294 0.75776 1.23180 1.20759 0.83265 0.75312 0.89922 0.88336 0.91796 0.90614 0.75760 0.90874 0.92237 0.93033 0.89160 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.07 10.65 127.77 1.36 1.29 16 2 N -0.41 -0.97 3.16 -534.33 -1.69 -2.66 16 3 C 0.03 -0.04 9.94 83.48 0.83 0.79 16 4 C -0.22 -0.22 5.44 -20.12 -0.11 -0.33 16 5 C -0.04 0.00 3.02 71.24 0.22 0.22 16 6 O -0.56 -0.63 12.88 -148.98 -1.92 -2.55 16 7 Si 0.78 -2.31 30.59 68.60 2.10 -0.21 16 8 C -0.12 -0.35 10.29 22.57 0.23 -0.11 16 9 C -0.08 -0.40 6.89 40.35 0.28 -0.12 16 10 C 0.59 3.97 7.74 86.45 0.67 4.64 16 11 O -0.58 -7.18 14.26 -4.33 -0.06 -7.24 16 12 N -0.70 -0.92 4.22 -446.50 -1.88 -2.80 16 13 C 0.14 -0.06 2.83 44.99 0.13 0.07 16 14 H 0.08 0.24 7.50 -2.39 -0.02 0.22 16 15 C -0.12 0.50 5.61 30.59 0.17 0.68 16 16 C -0.12 0.30 5.40 30.59 0.17 0.47 16 17 C 0.10 -0.23 3.47 30.59 0.11 -0.12 16 18 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 19 O -0.59 -0.39 13.32 -148.98 -1.98 -2.37 16 20 C -0.14 0.28 5.39 30.59 0.16 0.45 16 21 C -0.12 0.12 5.60 30.59 0.17 0.29 16 22 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 23 H 0.11 -0.76 8.14 -2.39 -0.02 -0.78 16 24 H 0.09 0.33 6.19 -2.39 -0.01 0.31 16 25 H 0.20 -1.58 6.19 -2.91 -0.02 -1.60 16 26 H 0.10 0.18 7.96 -2.39 -0.02 0.16 16 27 H 0.39 -2.62 8.70 -74.05 -0.64 -3.26 16 28 H -0.30 -1.57 7.11 99.48 0.71 -0.87 16 29 H -0.28 -0.27 7.11 99.48 0.71 0.43 16 30 H 0.15 0.11 7.45 -2.91 -0.02 0.09 16 31 H 0.41 -0.56 5.77 -92.71 -0.53 -1.10 16 32 H 0.08 -0.38 8.14 -2.38 -0.02 -0.40 16 33 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 34 H 0.06 -0.11 6.51 -2.39 -0.02 -0.13 16 35 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.39 -2.57 9.08 -74.06 -0.67 -3.25 16 37 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 38 H 0.06 0.05 7.60 -2.39 -0.02 0.03 16 39 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 40 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 Total: 0.00 -19.82 321.12 -1.79 -21.62 By element: Atomic # 1 Polarization: -11.25 SS G_CDS: -0.74 Total: -11.98 kcal Atomic # 6 Polarization: 3.83 SS G_CDS: 4.38 Total: 8.21 kcal Atomic # 7 Polarization: -1.89 SS G_CDS: -3.57 Total: -5.47 kcal Atomic # 8 Polarization: -8.20 SS G_CDS: -3.97 Total: -12.16 kcal Atomic # 14 Polarization: -2.31 SS G_CDS: 2.10 Total: -0.21 kcal Total: -19.82 -1.79 -21.62 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_10803934.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.915 kcal (2) G-P(sol) polarization free energy of solvation -19.821 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.795 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.615 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds