Wall clock time and date at job start Sat Mar 6 2021 23:52:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.37656 * 125.67745 * 2 1 4 4 C 1.46680 * 126.23251 * 359.96128 * 3 2 1 5 5 O 1.21688 * 119.99782 * 4.29453 * 4 3 2 6 6 N 1.34770 * 119.99627 * 184.29219 * 4 3 2 7 7 C 1.46500 * 119.99877 * 174.61293 * 6 4 3 8 8 H 1.09000 * 109.47311 * 325.00655 * 7 6 4 9 9 C 1.53005 * 109.47010 * 85.00028 * 7 6 4 10 10 C 1.52997 * 109.47093 * 180.02562 * 9 7 6 11 11 C 1.52994 * 109.47361 * 299.99973 * 10 9 7 12 12 H 1.09002 * 109.47780 * 180.02562 * 11 10 9 13 13 O 1.42902 * 109.47425 * 300.00369 * 11 10 9 14 14 C 1.53004 * 109.47319 * 60.00165 * 11 10 9 15 15 C 1.52994 * 109.47414 * 204.99982 * 7 6 4 16 16 C 1.37866 * 107.53036 * 179.69935 * 3 2 1 17 17 C 1.39832 * 107.08992 * 0.26396 * 16 3 2 18 18 C 1.35456 * 107.86582 * 359.97438 * 17 16 3 19 19 C 1.50693 * 125.56657 * 180.02562 * 18 17 16 20 20 O 1.42901 * 109.47305 * 209.97369 * 19 18 17 21 21 Si 1.86292 * 109.47299 * 329.97534 * 19 18 17 22 22 H 1.08999 * 109.46835 * 91.26087 * 1 2 3 23 23 H 1.08997 * 109.47123 * 211.26518 * 1 2 3 24 24 H 1.09003 * 109.46692 * 331.26508 * 1 2 3 25 25 H 0.96999 * 120.00428 * 354.61858 * 6 4 3 26 26 H 1.09001 * 109.47259 * 300.00557 * 9 7 6 27 27 H 1.09000 * 109.47096 * 60.00137 * 9 7 6 28 28 H 1.09000 * 109.47280 * 60.00595 * 10 9 7 29 29 H 1.09007 * 109.47164 * 180.02562 * 10 9 7 30 30 H 0.96699 * 114.00075 * 179.97438 * 13 11 10 31 31 H 1.08997 * 109.47531 * 180.02562 * 14 11 10 32 32 H 1.09000 * 109.46571 * 59.99838 * 14 11 10 33 33 H 1.09000 * 109.47431 * 300.00599 * 15 7 6 34 34 H 1.08997 * 109.47168 * 60.00466 * 15 7 6 35 35 H 1.08001 * 126.45759 * 180.29192 * 16 3 2 36 36 H 1.07998 * 126.07567 * 179.97438 * 17 16 3 37 37 H 1.09005 * 109.46976 * 89.97931 * 19 18 17 38 38 H 0.96707 * 113.99648 * 59.99715 * 20 19 18 39 39 H 1.48505 * 110.00155 * 58.68333 * 21 19 18 40 40 H 1.48500 * 109.99997 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2679 1.1182 0.0000 4 6 1.8124 2.5125 -0.0008 5 8 0.6245 2.7645 0.0774 6 7 2.7096 3.5143 -0.0881 7 6 2.2506 4.9004 -0.2079 8 1 1.3369 4.9305 -0.8015 9 6 1.9721 5.4676 1.1856 10 6 1.4921 6.9150 1.0605 11 6 2.5729 7.7534 0.3752 12 1 2.2311 8.7846 0.2864 13 8 3.7709 7.7144 1.1533 14 6 2.8513 7.1862 -1.0183 15 6 3.3318 5.7384 -0.8929 16 6 3.5780 0.6888 0.0069 17 6 3.5522 -0.7093 0.0049 18 6 2.2555 -1.1010 -0.0024 19 6 1.7710 -2.5279 -0.0063 20 8 0.5163 -2.6031 -0.6862 21 14 3.0159 -3.6041 -0.8794 22 1 -0.3633 -0.0226 -1.0274 23 1 -0.3633 -0.8784 0.5333 24 1 -0.3633 0.9012 0.4941 25 1 3.6594 3.3177 -0.0716 26 1 1.2018 4.8706 1.6737 27 1 2.8857 5.4375 1.7794 28 1 0.5783 6.9447 0.4670 29 1 1.2942 7.3192 2.0533 30 1 4.5008 8.2254 0.7775 31 1 3.6217 7.7832 -1.5064 32 1 1.9376 7.2159 -1.6118 33 1 4.2455 5.7083 -0.2992 34 1 3.5301 5.3344 -1.8856 35 1 4.4583 1.3144 0.0132 36 1 4.4132 -1.3612 0.0086 37 1 1.6490 -2.8729 1.0205 38 1 0.5501 -2.3106 -1.6074 39 1 4.3334 -3.5100 -0.2007 40 1 2.5499 -5.0141 -0.8895 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_10803936.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:52:57 Heat of formation + Delta-G solvation = -74.176980 kcal Electronic energy + Delta-G solvation = -22661.904017 eV Core-core repulsion = 19250.613069 eV Total energy + Delta-G solvation = -3411.290948 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.54632 -40.82829 -39.42318 -37.78182 -36.63950 -34.52497 -33.58688 -31.87375 -31.54939 -29.62707 -27.41191 -26.65208 -23.95545 -23.62014 -22.63224 -21.26634 -21.06181 -20.27720 -18.86445 -18.17184 -17.80413 -17.20573 -16.87731 -16.73337 -16.05346 -15.88865 -15.61316 -15.34363 -15.16018 -14.77109 -14.45321 -14.38880 -14.32166 -14.12696 -13.69744 -13.35134 -13.28745 -13.18850 -13.14847 -12.93254 -12.46956 -12.22906 -12.10955 -11.99849 -11.62319 -11.29023 -10.95820 -10.82063 -10.64714 -10.04231 -9.71010 -9.05348 -5.04023 0.46456 1.11837 1.52806 1.70989 1.72044 1.98632 2.40923 2.45548 3.21487 3.25978 3.55863 3.58603 3.69597 3.82478 3.93055 4.02351 4.07639 4.17043 4.31261 4.32631 4.38137 4.44925 4.45813 4.47122 4.54308 4.62120 4.81348 4.83354 4.90441 4.98676 5.02272 5.08091 5.15906 5.17365 5.25993 5.39981 5.54163 5.74571 6.01625 6.17526 6.36637 6.54176 6.67601 7.24857 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.390 5.390 3 C -0.052 4.052 4 C 0.591 3.409 5 O -0.546 6.546 6 N -0.715 5.715 7 C 0.151 3.849 8 H 0.086 0.914 9 C -0.126 4.126 10 C -0.110 4.110 11 C 0.102 3.898 12 H 0.057 0.943 13 O -0.563 6.563 14 C -0.149 4.149 15 C -0.123 4.123 16 C -0.135 4.135 17 C -0.205 4.205 18 C 0.014 3.986 19 C -0.050 4.050 20 O -0.543 6.543 21 Si 0.723 3.277 22 H 0.076 0.924 23 H 0.093 0.907 24 H 0.100 0.900 25 H 0.403 0.597 26 H 0.067 0.933 27 H 0.074 0.926 28 H 0.078 0.922 29 H 0.073 0.927 30 H 0.376 0.624 31 H 0.072 0.928 32 H 0.076 0.924 33 H 0.076 0.924 34 H 0.069 0.931 35 H 0.146 0.854 36 H 0.147 0.853 37 H 0.119 0.881 38 H 0.380 0.620 39 H -0.252 1.252 40 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.131 1.630 -3.960 5.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.063 5.063 3 C -0.166 4.166 4 C 0.380 3.620 5 O -0.425 6.425 6 N -0.366 5.366 7 C 0.047 3.953 8 H 0.104 0.896 9 C -0.164 4.164 10 C -0.148 4.148 11 C 0.043 3.957 12 H 0.075 0.925 13 O -0.369 6.369 14 C -0.187 4.187 15 C -0.161 4.161 16 C -0.161 4.161 17 C -0.229 4.229 18 C -0.104 4.104 19 C -0.160 4.160 20 O -0.348 6.348 21 Si 0.622 3.378 22 H 0.094 0.906 23 H 0.111 0.889 24 H 0.119 0.881 25 H 0.238 0.762 26 H 0.086 0.914 27 H 0.092 0.908 28 H 0.096 0.904 29 H 0.092 0.908 30 H 0.223 0.777 31 H 0.090 0.910 32 H 0.094 0.906 33 H 0.095 0.905 34 H 0.088 0.912 35 H 0.163 0.837 36 H 0.164 0.836 37 H 0.136 0.864 38 H 0.228 0.772 39 H -0.176 1.176 40 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 1.826 0.555 -2.895 3.467 hybrid contribution 0.553 0.641 0.209 0.871 sum 2.378 1.196 -2.686 3.782 Atomic orbital electron populations 1.22391 0.75454 1.05626 1.04115 1.43757 1.07011 1.04002 1.51491 1.20054 0.90495 0.87522 1.18520 1.16969 0.85604 0.83492 0.75966 1.90789 1.16290 1.84831 1.50626 1.45694 1.09766 1.06057 1.75035 1.21006 0.98118 0.79192 0.96989 0.89552 1.21831 1.02411 0.95398 0.96796 1.21516 0.96833 0.94783 1.01706 1.21823 0.85979 0.98120 0.89792 0.92461 1.86537 1.23007 1.75501 1.51824 1.22213 1.02516 0.96120 0.97849 1.21719 0.98705 0.94730 1.00911 1.21281 0.94413 0.95156 1.05276 1.20639 0.95065 0.95418 1.11774 1.21116 0.90947 0.89205 1.09108 1.24972 0.94260 0.94577 1.02228 1.86495 1.30159 1.89044 1.29148 0.94019 0.76363 0.77662 0.89712 0.90575 0.88880 0.88119 0.76245 0.91409 0.90772 0.90386 0.90846 0.77653 0.90978 0.90579 0.90516 0.91223 0.83668 0.83574 0.86400 0.77221 1.17637 1.17787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.09 9.40 59.85 0.56 0.65 16 2 N -0.39 -0.88 3.16 -115.61 -0.37 -1.24 16 3 C -0.05 -0.13 6.89 -81.98 -0.56 -0.70 16 4 C 0.59 1.90 7.73 -12.86 -0.10 1.80 16 5 O -0.55 -3.31 14.28 5.20 0.07 -3.24 16 6 N -0.71 -0.33 5.06 -55.12 -0.28 -0.61 16 7 C 0.15 0.05 2.41 -67.93 -0.16 -0.12 16 8 H 0.09 0.15 7.66 -51.93 -0.40 -0.24 16 9 C -0.13 -0.15 5.35 -26.73 -0.14 -0.29 16 10 C -0.11 -0.01 5.66 -26.74 -0.15 -0.16 16 11 C 0.10 -0.11 3.77 -26.73 -0.10 -0.21 16 12 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 13 O -0.56 0.18 11.97 -35.23 -0.42 -0.24 16 14 C -0.15 0.33 5.64 -26.70 -0.15 0.18 16 15 C -0.12 0.21 5.25 -26.70 -0.14 0.07 16 16 C -0.14 -0.11 10.35 -39.12 -0.41 -0.52 16 17 C -0.20 -0.16 9.37 -39.98 -0.37 -0.53 16 18 C 0.01 0.02 6.14 -81.95 -0.50 -0.49 16 19 C -0.05 0.02 2.88 36.00 0.10 0.13 16 20 O -0.54 0.31 10.43 -35.23 -0.37 -0.05 16 21 Si 0.72 -1.23 31.29 -169.99 -5.32 -6.55 16 22 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 23 H 0.09 0.08 6.90 -51.93 -0.36 -0.28 16 24 H 0.10 0.31 6.16 -51.93 -0.32 -0.01 16 25 H 0.40 -0.71 7.50 -40.82 -0.31 -1.02 16 26 H 0.07 0.21 8.08 -51.93 -0.42 -0.21 16 27 H 0.07 0.15 7.68 -51.93 -0.40 -0.25 16 28 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.07 0.05 8.14 -51.92 -0.42 -0.37 16 30 H 0.38 -1.49 9.08 45.56 0.41 -1.07 16 31 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.08 -0.13 7.68 -51.93 -0.40 -0.53 16 34 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.15 -0.27 7.45 -52.49 -0.39 -0.66 16 36 H 0.15 -0.09 6.62 -52.49 -0.35 -0.43 16 37 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 38 H 0.38 -1.46 8.70 45.56 0.40 -1.06 16 39 H -0.25 -0.07 6.76 56.52 0.38 0.31 16 40 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 LS Contribution 319.39 15.07 4.81 4.81 Total: 0.00 -7.57 319.39 -9.11 -16.68 By element: Atomic # 1 Polarization: -4.26 SS G_CDS: -5.12 Total: -9.38 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -2.13 Total: -0.20 kcal Atomic # 7 Polarization: -1.20 SS G_CDS: -0.64 Total: -1.85 kcal Atomic # 8 Polarization: -2.82 SS G_CDS: -0.72 Total: -3.53 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.32 Total: -6.55 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -7.57 -9.11 -16.68 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_10803936.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.492 kcal (2) G-P(sol) polarization free energy of solvation -7.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.064 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.685 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds