Wall clock time and date at job start Sat Mar 6 2021 23:53:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47092 * 2 1 4 4 C 1.50703 * 109.47210 * 120.00202 * 2 1 3 5 5 C 1.36449 * 120.29375 * 120.01848 * 4 2 1 6 6 C 1.40089 * 119.25233 * 179.97438 * 5 4 2 7 7 C 1.40855 * 132.86748 * 180.02562 * 6 5 4 8 8 C 1.46570 * 126.57538 * 359.96097 * 7 6 5 9 9 O 1.21719 * 120.00460 * 0.02562 * 8 7 6 10 10 N 1.34778 * 119.99912 * 180.02562 * 8 7 6 11 11 C 1.46494 * 120.00230 * 179.97438 * 10 8 7 12 12 H 1.08995 * 109.47170 * 34.99775 * 11 10 8 13 13 C 1.52998 * 109.47479 * 154.99921 * 11 10 8 14 14 C 1.53005 * 109.47049 * 59.99623 * 13 11 10 15 15 C 1.53000 * 109.46949 * 60.00440 * 14 13 11 16 16 H 1.08997 * 109.47496 * 59.99463 * 15 14 13 17 17 O 1.42896 * 109.47277 * 179.97438 * 15 14 13 18 18 C 1.53010 * 109.47185 * 299.99800 * 15 14 13 19 19 C 1.52997 * 109.46836 * 60.00123 * 18 15 14 20 20 C 1.40554 * 106.84381 * 179.97438 * 7 6 5 21 21 N 1.30744 * 108.73975 * 0.02562 * 20 7 6 22 22 N 1.36576 * 120.22869 * 359.97438 * 6 5 4 23 23 C 1.36236 * 120.08398 * 0.02562 * 22 6 5 24 24 C 1.35190 * 120.70558 * 359.97438 * 23 22 6 25 25 H 0.96705 * 114.00011 * 59.99517 * 1 2 3 26 26 H 1.09003 * 109.46774 * 239.99893 * 2 1 3 27 27 H 1.48500 * 110.00563 * 298.68175 * 3 2 1 28 28 H 1.48499 * 110.00025 * 60.00728 * 3 2 1 29 29 H 1.07998 * 120.37247 * 359.95711 * 5 4 2 30 30 H 0.97009 * 119.99867 * 359.97438 * 10 8 7 31 31 H 1.08994 * 109.47351 * 179.97438 * 13 11 10 32 32 H 1.08995 * 109.47099 * 299.99879 * 13 11 10 33 33 H 1.08997 * 109.47314 * 180.02562 * 14 13 11 34 34 H 1.08994 * 109.47357 * 300.00645 * 14 13 11 35 35 H 0.96700 * 114.00346 * 179.97438 * 17 15 14 36 36 H 1.08998 * 109.47026 * 179.97438 * 18 15 14 37 37 H 1.08997 * 109.46629 * 300.00194 * 18 15 14 38 38 H 1.08997 * 109.47136 * 180.02562 * 19 18 15 39 39 H 1.08994 * 109.47351 * 59.99813 * 19 18 15 40 40 H 1.07992 * 125.62729 * 180.26707 * 20 7 6 41 41 H 1.08000 * 119.64521 * 179.97438 * 23 22 6 42 42 H 1.07995 * 119.84128 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.7165 -1.8201 1.1122 6 6 3.1718 -2.4632 2.2705 7 6 3.9766 -3.5996 2.4821 8 6 4.5772 -4.4491 1.4497 9 8 4.3975 -4.1959 0.2728 10 7 5.3284 -5.5107 1.8035 11 6 5.9282 -6.3601 0.7716 12 1 6.2154 -5.7466 -0.0823 13 6 7.1671 -7.0552 1.3398 14 6 6.7640 -7.9164 2.5385 15 6 5.7485 -8.9697 2.0912 16 1 6.1947 -9.6017 1.3234 17 8 5.3724 -9.7744 3.2106 18 6 4.5095 -8.2746 1.5229 19 6 4.9126 -7.4135 0.3243 20 6 4.0930 -3.7629 3.8733 21 7 3.4192 -2.8118 4.4657 22 7 2.8323 -1.9819 3.5027 23 6 2.0479 -0.8732 3.6105 24 6 1.5971 -0.2366 2.5064 25 1 -0.3933 0.4418 -0.7650 26 1 1.7923 -0.5139 -0.8900 27 1 1.5879 2.4587 -1.2242 28 1 1.5616 2.4678 1.2086 29 1 2.9836 -2.1986 0.1366 30 1 5.4719 -5.7123 2.7415 31 1 7.6131 -7.6875 0.5722 32 1 7.8906 -6.3049 1.6584 33 1 7.6467 -8.4112 2.9436 34 1 6.3177 -7.2844 3.3062 35 1 4.7289 -10.4648 3.0002 36 1 3.7862 -9.0251 1.2039 37 1 4.0633 -7.6427 2.2908 38 1 4.0301 -6.9180 -0.0803 39 1 5.3589 -8.0455 -0.4434 40 1 4.6504 -4.5427 4.3707 41 1 1.7834 -0.4990 4.5885 42 1 0.9765 0.6413 2.6081 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_11618758.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:00 Heat of formation + Delta-G solvation = -13.914015 kcal Electronic energy + Delta-G solvation = -26798.423693 eV Core-core repulsion = 22939.641610 eV Total energy + Delta-G solvation = -3858.782083 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -43.23789 -41.05840 -39.42215 -39.01394 -37.40551 -36.88221 -34.27268 -33.81137 -32.11579 -31.91689 -30.67018 -29.35369 -27.23819 -25.02071 -23.91133 -23.80008 -23.16621 -22.80225 -21.36675 -20.15160 -19.24089 -18.60866 -18.24842 -17.88350 -17.63763 -16.87407 -16.83021 -16.68337 -16.38016 -15.90073 -15.62486 -15.57129 -15.42804 -14.76465 -14.51532 -14.48382 -14.16511 -14.06675 -13.96381 -13.90071 -13.31391 -13.25718 -12.99907 -12.84542 -12.72438 -12.23899 -12.20544 -12.09547 -11.89478 -11.74881 -11.52830 -11.24157 -10.83781 -10.77294 -10.69772 -10.26661 -9.93639 -8.70947 -5.07020 -0.52370 -0.07017 1.05617 1.08310 1.14992 1.47829 1.78650 2.08214 2.32910 2.64790 2.97511 3.14584 3.17421 3.45419 3.55205 3.64063 3.67946 3.73637 3.88518 3.96180 4.03674 4.07657 4.16961 4.20127 4.27648 4.32065 4.37706 4.39681 4.49578 4.56420 4.61351 4.77828 4.80143 4.98787 5.04849 5.05797 5.11033 5.13825 5.19857 5.24507 5.30343 5.32473 5.64766 5.70243 6.26325 6.36849 6.67549 6.67979 7.46123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.077 4.077 3 Si 0.692 3.308 4 C -0.026 4.026 5 C -0.092 4.092 6 C 0.169 3.831 7 C -0.316 4.316 8 C 0.603 3.397 9 O -0.550 6.550 10 N -0.723 5.723 11 C 0.147 3.853 12 H 0.094 0.906 13 C -0.126 4.126 14 C -0.114 4.114 15 C 0.103 3.897 16 H 0.056 0.944 17 O -0.569 6.569 18 C -0.151 4.151 19 C -0.129 4.129 20 C 0.119 3.881 21 N -0.313 5.313 22 N -0.265 5.265 23 C 0.115 3.885 24 C -0.144 4.144 25 H 0.385 0.615 26 H 0.084 0.916 27 H -0.252 1.252 28 H -0.248 1.248 29 H 0.165 0.835 30 H 0.397 0.603 31 H 0.083 0.917 32 H 0.079 0.921 33 H 0.075 0.925 34 H 0.067 0.933 35 H 0.379 0.621 36 H 0.064 0.936 37 H 0.071 0.929 38 H 0.073 0.927 39 H 0.073 0.927 40 H 0.197 0.803 41 H 0.177 0.823 42 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.546 0.924 -1.383 2.270 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.031 4.031 5 C -0.111 4.111 6 C 0.048 3.952 7 C -0.331 4.331 8 C 0.392 3.608 9 O -0.429 6.429 10 N -0.375 5.375 11 C 0.043 3.957 12 H 0.112 0.888 13 C -0.164 4.164 14 C -0.152 4.152 15 C 0.044 3.956 16 H 0.074 0.926 17 O -0.375 6.375 18 C -0.189 4.189 19 C -0.168 4.168 20 C -0.062 4.062 21 N -0.133 5.133 22 N -0.029 5.029 23 C -0.011 4.011 24 C -0.166 4.166 25 H 0.233 0.767 26 H 0.102 0.898 27 H -0.176 1.176 28 H -0.171 1.171 29 H 0.182 0.818 30 H 0.232 0.768 31 H 0.101 0.899 32 H 0.097 0.903 33 H 0.094 0.906 34 H 0.086 0.914 35 H 0.227 0.773 36 H 0.083 0.917 37 H 0.090 0.910 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.214 0.786 41 H 0.194 0.806 42 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 1.436 2.434 -0.126 2.829 hybrid contribution -1.287 -1.060 -0.990 1.939 sum 0.148 1.374 -1.116 1.776 Atomic orbital electron populations 1.86579 1.16987 1.80333 1.50105 1.24728 0.85022 1.11289 0.97495 0.94451 0.91725 0.73467 0.81323 1.19345 0.95458 0.94217 0.94120 1.20654 0.98442 0.93813 0.98239 1.19225 0.95720 0.94176 0.86085 1.19614 1.16159 1.03785 0.93555 1.16819 0.77421 0.79312 0.87266 1.90770 1.61410 1.72264 1.18502 1.45830 1.52915 1.28711 1.10048 1.20934 0.92205 0.91195 0.91368 0.88827 1.21824 0.97003 0.99254 0.98303 1.21478 0.98968 0.96664 0.98083 1.21841 0.94235 0.91647 0.87837 0.92583 1.86506 1.65501 1.49438 1.36068 1.22243 0.98101 0.99792 0.98725 1.21889 1.00189 0.97180 0.97532 1.24049 0.94394 0.95735 0.92029 1.77642 1.18508 1.06412 1.10767 1.46091 1.32049 1.18919 1.05823 1.21562 0.92341 0.85341 1.01829 1.20783 1.02794 1.02570 0.90429 0.76658 0.89800 1.17574 1.17146 0.81778 0.76756 0.89883 0.90282 0.90638 0.91404 0.77344 0.91693 0.91025 0.90821 0.90791 0.78634 0.80588 0.82329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.14 12.76 -35.23 -0.45 -0.31 16 2 C -0.08 0.09 2.81 36.01 0.10 0.19 16 3 Si 0.69 -1.50 31.96 -169.99 -5.43 -6.93 16 4 C -0.03 -0.01 4.53 -104.55 -0.47 -0.49 16 5 C -0.09 -0.18 9.35 -39.53 -0.37 -0.55 16 6 C 0.17 0.55 6.76 -84.07 -0.57 -0.02 16 7 C -0.32 -0.88 6.17 -104.68 -0.65 -1.53 16 8 C 0.60 1.79 7.75 -12.90 -0.10 1.69 16 9 O -0.55 -3.18 15.37 5.17 0.08 -3.10 16 10 N -0.72 0.01 4.22 -55.15 -0.23 -0.23 16 11 C 0.15 -0.07 2.78 -67.93 -0.19 -0.26 16 12 H 0.09 0.08 7.57 -51.93 -0.39 -0.31 16 13 C -0.13 0.28 5.61 -26.73 -0.15 0.13 16 14 C -0.11 0.16 5.40 -26.73 -0.14 0.02 16 15 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 16 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 17 O -0.57 -0.25 13.32 -35.23 -0.47 -0.72 16 18 C -0.15 0.12 5.39 -26.73 -0.14 -0.03 16 19 C -0.13 0.05 5.60 -26.73 -0.15 -0.10 16 20 C 0.12 0.16 11.44 -17.14 -0.20 -0.04 16 21 N -0.31 -1.02 12.57 30.75 0.39 -0.63 16 22 N -0.26 -0.74 3.86 -10.55 -0.04 -0.78 16 23 C 0.12 0.03 11.17 -16.68 -0.19 -0.15 16 24 C -0.14 0.03 8.67 -39.95 -0.35 -0.32 16 25 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 26 H 0.08 -0.20 7.71 -51.93 -0.40 -0.60 16 27 H -0.25 0.07 7.11 56.52 0.40 0.47 16 28 H -0.25 -0.02 7.07 56.52 0.40 0.38 16 29 H 0.16 0.30 7.01 -52.49 -0.37 -0.06 16 30 H 0.40 -0.74 5.79 -40.82 -0.24 -0.98 16 31 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 32 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.07 -0.11 6.50 -51.93 -0.34 -0.45 16 35 H 0.38 -1.15 9.08 45.56 0.41 -0.74 16 36 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.07 0.02 7.60 -51.93 -0.39 -0.38 16 38 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.20 -0.51 7.46 -52.49 -0.39 -0.90 16 41 H 0.18 -0.43 8.06 -52.49 -0.42 -0.85 16 42 H 0.16 -0.28 7.52 -52.49 -0.39 -0.67 16 LS Contribution 345.18 15.07 5.20 5.20 Total: 0.00 -9.73 345.18 -9.30 -19.03 By element: Atomic # 1 Polarization: -5.21 SS G_CDS: -4.69 Total: -9.90 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -3.65 Total: -1.63 kcal Atomic # 7 Polarization: -1.75 SS G_CDS: 0.11 Total: -1.64 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -0.84 Total: -4.13 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.43 Total: -6.93 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -9.73 -9.30 -19.03 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_11618758.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.118 kcal (2) G-P(sol) polarization free energy of solvation -9.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.032 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds