Wall clock time and date at job start Sat Mar 6 2021 23:53:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35454 * 125.56296 * 2 1 4 4 C 1.50700 * 126.06531 * 0.05813 * 3 2 1 5 5 O 1.42901 * 109.47201 * 209.96246 * 4 3 2 6 6 Si 1.86296 * 109.47419 * 329.96288 * 4 3 2 7 7 C 1.39833 * 107.86430 * 180.02562 * 3 2 1 8 8 C 1.50703 * 126.45470 * 180.02562 * 7 3 2 9 9 C 1.37870 * 107.08739 * 359.97438 * 7 3 2 10 10 C 1.46677 * 126.23304 * 180.02562 * 9 7 3 11 11 O 1.21696 * 119.99843 * 0.02562 * 10 9 7 12 12 N 1.34780 * 119.99982 * 180.02562 * 10 9 7 13 13 C 1.46492 * 119.99930 * 180.02562 * 12 10 9 14 14 H 1.09002 * 109.47696 * 34.99761 * 13 12 10 15 15 C 1.53002 * 109.47204 * 155.00105 * 13 12 10 16 16 C 1.53000 * 109.47233 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.47060 * 299.99657 * 16 15 13 18 18 H 1.08996 * 109.47853 * 180.02562 * 17 16 15 19 19 O 1.42905 * 109.47264 * 300.00236 * 17 16 15 20 20 C 1.52999 * 109.47317 * 59.99960 * 17 16 15 21 21 C 1.52997 * 109.47244 * 274.99857 * 13 12 10 22 22 N 1.35529 * 125.56521 * 180.33956 * 2 1 3 23 23 H 1.08997 * 109.46684 * 90.01264 * 1 2 3 24 24 H 1.09004 * 109.46825 * 210.00437 * 1 2 3 25 25 H 1.08999 * 109.47503 * 330.00469 * 1 2 3 26 26 H 1.09003 * 109.46987 * 89.96584 * 4 3 2 27 27 H 0.96704 * 114.00257 * 180.02562 * 5 4 3 28 28 H 1.48501 * 110.00189 * 178.68133 * 6 4 3 29 29 H 1.48502 * 110.00241 * 300.00451 * 6 4 3 30 30 H 1.09001 * 109.46611 * 269.97825 * 8 7 3 31 31 H 1.08997 * 109.47477 * 29.97718 * 8 7 3 32 32 H 1.08997 * 109.47406 * 149.98190 * 8 7 3 33 33 H 0.96998 * 119.99716 * 359.97438 * 12 10 9 34 34 H 1.08992 * 109.47063 * 59.99836 * 15 13 12 35 35 H 1.09004 * 109.46733 * 299.99549 * 15 13 12 36 36 H 1.09002 * 109.47398 * 59.99826 * 16 15 13 37 37 H 1.09001 * 109.47194 * 180.02562 * 16 15 13 38 38 H 0.96696 * 113.99968 * 179.97438 * 19 17 16 39 39 H 1.09000 * 109.47486 * 180.02562 * 20 17 16 40 40 H 1.09002 * 109.46716 * 60.00091 * 20 17 16 41 41 H 1.09002 * 109.47153 * 300.00242 * 21 13 12 42 42 H 1.09001 * 109.47289 * 60.00326 * 21 13 12 43 43 H 0.96997 * 125.68134 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5321 0.0012 5 8 2.7768 3.3524 -0.6719 6 14 0.1803 2.6428 -0.8765 7 6 3.6269 0.6768 -0.0006 8 6 4.8485 1.5593 -0.0003 9 6 3.6122 -0.7018 -0.0004 10 6 4.7860 -1.5814 -0.0003 11 8 5.9049 -1.1028 0.0001 12 7 4.6254 -2.9196 -0.0006 13 6 5.7977 -3.7980 0.0001 14 1 6.5930 -3.3423 0.5901 15 6 5.4215 -5.1502 0.6093 16 6 6.6461 -6.0674 0.6106 17 6 7.1311 -6.2725 -0.8259 18 1 8.0033 -6.9263 -0.8252 19 8 6.0890 -6.8702 -1.5998 20 6 7.5073 -4.9204 -1.4352 21 6 6.2822 -4.0030 -1.4366 22 7 2.2953 -1.1024 -0.0065 23 1 -0.3632 -0.0002 -1.0277 24 1 -0.3633 -0.8900 0.5139 25 1 -0.3634 0.8900 0.5137 26 1 1.7056 2.8761 1.0292 27 1 2.5360 4.2883 -0.7090 28 1 -0.3142 4.0429 -0.8544 29 1 0.3226 2.1765 -2.2792 30 1 5.1429 1.7724 -1.0279 31 1 4.6219 2.4933 0.5139 32 1 5.6642 1.0505 0.5133 33 1 3.7335 -3.3010 -0.0004 34 1 4.6264 -5.6058 0.0193 35 1 5.0765 -5.0041 1.6329 36 1 7.4410 -5.6115 1.2008 37 1 6.3780 -7.0308 1.0441 38 1 6.3269 -7.0294 -2.5235 39 1 7.8524 -5.0665 -2.4588 40 1 8.3022 -4.4645 -0.8449 41 1 5.4870 -4.4588 -2.0266 42 1 6.5503 -3.0398 -1.8706 43 1 1.9834 -2.0209 -0.0123 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12297754.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:02 Heat of formation + Delta-G solvation = -85.788402 kcal Electronic energy + Delta-G solvation = -24642.488859 eV Core-core repulsion = 21075.156783 eV Total energy + Delta-G solvation = -3567.332076 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.56896 -40.81976 -39.40457 -37.71139 -36.66082 -34.43758 -33.58301 -33.09153 -31.88143 -29.94503 -29.21738 -27.16313 -26.19482 -23.87245 -23.48527 -22.01546 -21.13628 -20.44333 -19.97659 -19.18074 -18.29118 -17.83476 -17.32288 -16.65282 -16.64860 -16.10891 -15.87692 -15.64537 -15.04428 -15.00159 -14.78203 -14.46350 -14.28696 -14.15478 -14.07554 -13.83027 -13.70782 -13.44695 -13.26016 -13.12941 -13.07624 -12.84953 -12.59091 -12.49039 -12.27740 -12.08212 -11.71709 -11.62949 -11.31410 -10.95801 -10.73566 -10.49876 -10.05886 -9.33953 -8.88616 -4.79690 0.50801 1.24759 1.64872 1.77911 2.00696 2.09892 2.14918 2.50291 3.23841 3.35963 3.61898 3.66962 3.72503 3.91697 3.92593 3.99103 4.03631 4.17406 4.21743 4.34964 4.35628 4.43141 4.44599 4.45836 4.59012 4.63799 4.72877 4.78552 4.85110 4.88556 4.98316 5.04138 5.10095 5.11953 5.23548 5.27978 5.31678 5.47129 5.49556 5.59524 5.83380 6.04535 6.37023 6.55869 6.64227 6.64932 7.27799 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 C 0.062 3.938 3 C -0.168 4.168 4 C -0.034 4.034 5 O -0.532 6.532 6 Si 0.649 3.351 7 C -0.035 4.035 8 C -0.082 4.082 9 C -0.070 4.070 10 C 0.592 3.408 11 O -0.523 6.523 12 N -0.730 5.730 13 C 0.149 3.851 14 H 0.089 0.911 15 C -0.123 4.123 16 C -0.109 4.109 17 C 0.102 3.898 18 H 0.058 0.942 19 O -0.565 6.565 20 C -0.150 4.150 21 C -0.125 4.125 22 N -0.534 5.534 23 H 0.088 0.912 24 H 0.088 0.912 25 H 0.101 0.899 26 H 0.069 0.931 27 H 0.376 0.624 28 H -0.259 1.259 29 H -0.256 1.256 30 H 0.066 0.934 31 H 0.068 0.932 32 H 0.073 0.927 33 H 0.392 0.608 34 H 0.077 0.923 35 H 0.068 0.932 36 H 0.079 0.921 37 H 0.075 0.925 38 H 0.378 0.622 39 H 0.069 0.931 40 H 0.075 0.925 41 H 0.069 0.931 42 H 0.067 0.933 43 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.682 -3.473 1.539 6.029 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C -0.056 4.056 3 C -0.175 4.175 4 C -0.144 4.144 5 O -0.338 6.338 6 Si 0.550 3.450 7 C -0.043 4.043 8 C -0.139 4.139 9 C -0.181 4.181 10 C 0.381 3.619 11 O -0.399 6.399 12 N -0.381 5.381 13 C 0.045 3.955 14 H 0.107 0.893 15 C -0.161 4.161 16 C -0.147 4.147 17 C 0.043 3.957 18 H 0.076 0.924 19 O -0.371 6.371 20 C -0.189 4.189 21 C -0.163 4.163 22 N -0.131 5.131 23 H 0.106 0.894 24 H 0.106 0.894 25 H 0.119 0.881 26 H 0.087 0.913 27 H 0.223 0.777 28 H -0.184 1.184 29 H -0.180 1.180 30 H 0.085 0.915 31 H 0.087 0.913 32 H 0.092 0.908 33 H 0.226 0.774 34 H 0.095 0.905 35 H 0.086 0.914 36 H 0.098 0.902 37 H 0.094 0.906 38 H 0.225 0.775 39 H 0.087 0.913 40 H 0.094 0.906 41 H 0.088 0.912 42 H 0.086 0.914 43 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -4.303 -3.498 1.384 5.715 hybrid contribution 0.453 0.322 -0.773 0.952 sum -3.849 -3.176 0.611 5.028 Atomic orbital electron populations 1.20401 0.87604 1.03568 1.04155 1.20000 0.93309 0.85667 1.06602 1.18436 0.92843 0.92479 1.13735 1.23923 1.01552 0.88935 0.99999 1.86610 1.45813 1.22101 1.79294 0.95635 0.81494 0.84172 0.83681 1.19780 0.95022 0.90559 0.98948 1.20295 0.93622 0.97636 1.02349 1.20112 0.82769 0.94085 1.21132 1.17007 0.87543 0.81237 0.76138 1.90832 1.24164 1.74923 1.49979 1.45952 1.09722 1.05748 1.76638 1.21000 0.87989 0.89617 0.96937 0.89286 1.21715 0.99237 0.93968 1.01162 1.21493 0.98082 1.00312 0.94772 1.21817 0.89767 0.92512 0.91606 0.92426 1.86495 1.41404 1.83339 1.25816 1.22230 0.98464 0.96314 1.01849 1.21825 0.97981 0.99834 0.96687 1.41674 1.05283 1.08128 1.58055 0.89392 0.89370 0.88147 0.91275 0.77705 1.18449 1.18030 0.91526 0.91332 0.90839 0.77431 0.90479 0.91352 0.90213 0.90585 0.77533 0.91266 0.90596 0.91198 0.91402 0.74603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.43 8.21 36.00 0.30 0.73 16 2 C 0.06 -0.01 6.84 -81.95 -0.56 -0.57 16 3 C -0.17 -0.42 5.41 -105.02 -0.57 -0.99 16 4 C -0.03 -0.03 2.99 36.01 0.11 0.07 16 5 O -0.53 -1.17 10.63 -35.23 -0.37 -1.55 16 6 Si 0.65 -0.27 26.77 -169.99 -4.55 -4.82 16 7 C -0.03 -0.16 6.15 -104.16 -0.64 -0.80 16 8 C -0.08 -0.41 8.72 36.01 0.31 -0.10 16 9 C -0.07 -0.21 7.06 -81.98 -0.58 -0.79 16 10 C 0.59 2.21 7.75 -12.85 -0.10 2.11 16 11 O -0.52 -3.73 14.46 5.19 0.08 -3.65 16 12 N -0.73 -0.32 5.07 -55.12 -0.28 -0.60 16 13 C 0.15 0.08 2.45 -67.94 -0.17 -0.08 16 14 H 0.09 0.20 7.58 -51.93 -0.39 -0.19 16 15 C -0.12 0.11 5.24 -26.73 -0.14 -0.03 16 16 C -0.11 0.11 5.66 -26.73 -0.15 -0.04 16 17 C 0.10 -0.10 3.77 -26.73 -0.10 -0.20 16 18 H 0.06 -0.09 8.14 -51.93 -0.42 -0.52 16 19 O -0.56 0.17 11.97 -35.23 -0.42 -0.25 16 20 C -0.15 0.11 5.64 -26.70 -0.15 -0.04 16 21 C -0.12 -0.09 5.35 -26.70 -0.14 -0.23 16 22 N -0.53 0.28 5.99 -5.70 -0.03 0.25 16 23 H 0.09 -0.41 7.13 -51.93 -0.37 -0.78 16 24 H 0.09 -0.55 8.14 -51.93 -0.42 -0.97 16 25 H 0.10 -0.57 5.17 -51.93 -0.27 -0.83 16 26 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 27 H 0.38 -0.66 8.74 45.56 0.40 -0.27 16 28 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 29 H -0.26 -0.87 7.11 56.52 0.40 -0.47 16 30 H 0.07 0.38 8.14 -51.93 -0.42 -0.05 16 31 H 0.07 0.30 7.11 -51.93 -0.37 -0.07 16 32 H 0.07 0.44 6.48 -51.93 -0.34 0.10 16 33 H 0.39 -0.89 7.73 -40.82 -0.32 -1.21 16 34 H 0.08 -0.03 7.68 -51.93 -0.40 -0.43 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.38 -1.32 9.08 45.56 0.41 -0.90 16 39 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.07 0.05 7.68 -51.93 -0.40 -0.34 16 42 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 43 H 0.42 -1.67 8.19 -40.82 -0.33 -2.01 16 LS Contribution 334.20 15.07 5.04 5.04 Total: 0.00 -9.82 334.20 -8.92 -18.74 By element: Atomic # 1 Polarization: -6.38 SS G_CDS: -5.79 Total: -12.17 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -2.58 Total: -0.97 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.31 Total: -0.35 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -0.72 Total: -5.45 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -4.55 Total: -4.82 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -9.82 -8.92 -18.74 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12297754.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.049 kcal (2) G-P(sol) polarization free energy of solvation -9.819 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.921 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.740 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds