Wall clock time and date at job start Sat Mar 6 2021 23:53:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35454 * 125.56296 * 2 1 4 4 C 1.50700 * 126.06531 * 0.05813 * 3 2 1 5 5 O 1.42901 * 109.47201 * 209.96246 * 4 3 2 6 6 Si 1.86296 * 109.47419 * 329.96288 * 4 3 2 7 7 C 1.39833 * 107.86430 * 180.02562 * 3 2 1 8 8 C 1.50703 * 126.45470 * 180.02562 * 7 3 2 9 9 C 1.37870 * 107.08739 * 359.97438 * 7 3 2 10 10 C 1.46677 * 126.23304 * 180.02562 * 9 7 3 11 11 O 1.21696 * 119.99843 * 0.02562 * 10 9 7 12 12 N 1.34780 * 119.99982 * 180.02562 * 10 9 7 13 13 C 1.46492 * 119.99930 * 180.02562 * 12 10 9 14 14 H 1.09002 * 109.47696 * 34.99761 * 13 12 10 15 15 C 1.53002 * 109.47204 * 155.00105 * 13 12 10 16 16 C 1.53000 * 109.47233 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.47060 * 299.99657 * 16 15 13 18 18 H 1.08996 * 109.47853 * 180.02562 * 17 16 15 19 19 O 1.42905 * 109.47264 * 300.00236 * 17 16 15 20 20 C 1.52999 * 109.47317 * 59.99960 * 17 16 15 21 21 C 1.52997 * 109.47244 * 274.99857 * 13 12 10 22 22 N 1.35529 * 125.56521 * 180.33956 * 2 1 3 23 23 H 1.08997 * 109.46684 * 90.01264 * 1 2 3 24 24 H 1.09004 * 109.46825 * 210.00437 * 1 2 3 25 25 H 1.08999 * 109.47503 * 330.00469 * 1 2 3 26 26 H 1.09003 * 109.46987 * 89.96584 * 4 3 2 27 27 H 0.96704 * 114.00257 * 180.02562 * 5 4 3 28 28 H 1.48501 * 110.00189 * 178.68133 * 6 4 3 29 29 H 1.48502 * 110.00241 * 300.00451 * 6 4 3 30 30 H 1.09001 * 109.46611 * 269.97825 * 8 7 3 31 31 H 1.08997 * 109.47477 * 29.97718 * 8 7 3 32 32 H 1.08997 * 109.47406 * 149.98190 * 8 7 3 33 33 H 0.96998 * 119.99716 * 359.97438 * 12 10 9 34 34 H 1.08992 * 109.47063 * 59.99836 * 15 13 12 35 35 H 1.09004 * 109.46733 * 299.99549 * 15 13 12 36 36 H 1.09002 * 109.47398 * 59.99826 * 16 15 13 37 37 H 1.09001 * 109.47194 * 180.02562 * 16 15 13 38 38 H 0.96696 * 113.99968 * 179.97438 * 19 17 16 39 39 H 1.09000 * 109.47486 * 180.02562 * 20 17 16 40 40 H 1.09002 * 109.46716 * 60.00091 * 20 17 16 41 41 H 1.09002 * 109.47153 * 300.00242 * 21 13 12 42 42 H 1.09001 * 109.47289 * 60.00326 * 21 13 12 43 43 H 0.96997 * 125.68134 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5321 0.0012 5 8 2.7768 3.3524 -0.6719 6 14 0.1803 2.6428 -0.8765 7 6 3.6269 0.6768 -0.0006 8 6 4.8485 1.5593 -0.0003 9 6 3.6122 -0.7018 -0.0004 10 6 4.7860 -1.5814 -0.0003 11 8 5.9049 -1.1028 0.0001 12 7 4.6254 -2.9196 -0.0006 13 6 5.7977 -3.7980 0.0001 14 1 6.5930 -3.3423 0.5901 15 6 5.4215 -5.1502 0.6093 16 6 6.6461 -6.0674 0.6106 17 6 7.1311 -6.2725 -0.8259 18 1 8.0033 -6.9263 -0.8252 19 8 6.0890 -6.8702 -1.5998 20 6 7.5073 -4.9204 -1.4352 21 6 6.2822 -4.0030 -1.4366 22 7 2.2953 -1.1024 -0.0065 23 1 -0.3632 -0.0002 -1.0277 24 1 -0.3633 -0.8900 0.5139 25 1 -0.3634 0.8900 0.5137 26 1 1.7056 2.8761 1.0292 27 1 2.5360 4.2883 -0.7090 28 1 -0.3142 4.0429 -0.8544 29 1 0.3226 2.1765 -2.2792 30 1 5.1429 1.7724 -1.0279 31 1 4.6219 2.4933 0.5139 32 1 5.6642 1.0505 0.5133 33 1 3.7335 -3.3010 -0.0004 34 1 4.6264 -5.6058 0.0193 35 1 5.0765 -5.0041 1.6329 36 1 7.4410 -5.6115 1.2008 37 1 6.3780 -7.0308 1.0441 38 1 6.3269 -7.0294 -2.5235 39 1 7.8524 -5.0665 -2.4588 40 1 8.3022 -4.4645 -0.8449 41 1 5.4870 -4.4588 -2.0266 42 1 6.5503 -3.0398 -1.8706 43 1 1.9834 -2.0209 -0.0123 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12297754.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:02 Heat of formation + Delta-G solvation = -90.967480 kcal Electronic energy + Delta-G solvation = -24642.713441 eV Core-core repulsion = 21075.156783 eV Total energy + Delta-G solvation = -3567.556658 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.66919 -40.92081 -39.52194 -37.80710 -36.74385 -34.53506 -33.70505 -33.09160 -31.86923 -29.97374 -29.27695 -27.31174 -26.27082 -23.87970 -23.50563 -22.14936 -21.17143 -20.53702 -20.08344 -19.26936 -18.38867 -17.79744 -17.37831 -16.77260 -16.73915 -16.17395 -15.97370 -15.65443 -15.13347 -15.02636 -14.89265 -14.44550 -14.37355 -14.15958 -14.05193 -13.93800 -13.68048 -13.56180 -13.26108 -13.20001 -13.13014 -13.03733 -12.63703 -12.49579 -12.41213 -12.08206 -11.83270 -11.65833 -11.31036 -11.16024 -10.74057 -10.61870 -10.22814 -9.48446 -8.96376 -4.78068 0.34011 1.20437 1.64472 1.70919 1.92586 2.08032 2.10881 2.24975 3.36496 3.37602 3.60003 3.69154 3.84970 3.87243 3.95206 4.01376 4.03968 4.18385 4.26648 4.35241 4.40214 4.45677 4.47608 4.58782 4.60200 4.66078 4.78486 4.83335 4.84848 4.89629 4.93220 5.01284 5.08656 5.10458 5.10819 5.18368 5.23244 5.27959 5.32618 5.44002 5.69172 5.82906 6.37485 6.54349 6.72553 6.87401 7.07531 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C 0.083 3.917 3 C -0.199 4.199 4 C -0.053 4.053 5 O -0.558 6.558 6 Si 0.755 3.245 7 C -0.071 4.071 8 C -0.071 4.071 9 C -0.085 4.085 10 C 0.589 3.411 11 O -0.568 6.568 12 N -0.714 5.714 13 C 0.149 3.851 14 H 0.069 0.931 15 C -0.113 4.113 16 C -0.113 4.113 17 C 0.105 3.895 18 H 0.068 0.932 19 O -0.578 6.578 20 C -0.147 4.147 21 C -0.119 4.119 22 N -0.517 5.517 23 H 0.099 0.901 24 H 0.120 0.880 25 H 0.120 0.880 26 H 0.084 0.916 27 H 0.389 0.611 28 H -0.287 1.287 29 H -0.309 1.309 30 H 0.049 0.951 31 H 0.069 0.931 32 H 0.055 0.945 33 H 0.408 0.592 34 H 0.078 0.922 35 H 0.075 0.925 36 H 0.084 0.916 37 H 0.079 0.921 38 H 0.390 0.610 39 H 0.076 0.924 40 H 0.071 0.929 41 H 0.072 0.928 42 H 0.040 0.960 43 H 0.434 0.566 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.970 -4.908 2.052 8.768 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.037 4.037 3 C -0.205 4.205 4 C -0.162 4.162 5 O -0.367 6.367 6 Si 0.661 3.339 7 C -0.080 4.080 8 C -0.129 4.129 9 C -0.197 4.197 10 C 0.378 3.622 11 O -0.447 6.447 12 N -0.365 5.365 13 C 0.045 3.955 14 H 0.087 0.913 15 C -0.151 4.151 16 C -0.151 4.151 17 C 0.046 3.954 18 H 0.086 0.914 19 O -0.386 6.386 20 C -0.186 4.186 21 C -0.158 4.158 22 N -0.115 5.115 23 H 0.117 0.883 24 H 0.139 0.861 25 H 0.137 0.863 26 H 0.101 0.899 27 H 0.239 0.761 28 H -0.214 1.214 29 H -0.237 1.237 30 H 0.068 0.932 31 H 0.088 0.912 32 H 0.074 0.926 33 H 0.244 0.756 34 H 0.097 0.903 35 H 0.094 0.906 36 H 0.102 0.898 37 H 0.098 0.902 38 H 0.240 0.760 39 H 0.095 0.905 40 H 0.090 0.910 41 H 0.091 0.909 42 H 0.059 0.941 43 H 0.276 0.724 Dipole moment (debyes) X Y Z Total from point charges -6.610 -4.986 1.919 8.499 hybrid contribution 1.170 0.777 -0.979 1.712 sum -5.440 -4.209 0.940 6.942 Atomic orbital electron populations 1.20707 0.84165 1.05883 1.05587 1.20627 0.95140 0.84647 1.03287 1.18784 0.92418 0.94115 1.15213 1.24351 1.02308 0.88234 1.01262 1.86577 1.47081 1.23423 1.79613 0.94579 0.78703 0.81319 0.79327 1.19960 0.95708 0.91454 1.00853 1.20106 0.93924 0.97838 1.00987 1.19923 0.83945 0.93620 1.22245 1.17202 0.87204 0.82138 0.75681 1.90803 1.25834 1.75840 1.52255 1.45815 1.10672 1.04733 1.75249 1.21000 0.87542 0.90219 0.96724 0.91309 1.21635 0.99404 0.92688 1.01348 1.21557 0.98141 1.00387 0.94999 1.21803 0.90023 0.92130 0.91454 0.91442 1.86458 1.41864 1.83309 1.26978 1.22217 0.97592 0.96339 1.02409 1.21746 0.98761 0.98760 0.96505 1.41641 1.03907 1.09258 1.56729 0.88281 0.86150 0.86256 0.89866 0.76120 1.21426 1.23733 0.93198 0.91196 0.92587 0.75615 0.90333 0.90624 0.89756 0.90226 0.76043 0.90486 0.90982 0.90933 0.94127 0.72445 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 1.25 8.21 71.24 0.59 1.83 16 2 C 0.08 -0.14 6.84 41.34 0.28 0.15 16 3 C -0.20 -1.08 5.41 -20.12 -0.11 -1.19 16 4 C -0.05 -0.12 2.99 71.24 0.21 0.10 16 5 O -0.56 -3.27 10.63 -148.98 -1.58 -4.86 16 6 Si 0.76 -1.20 26.77 68.60 1.84 0.64 16 7 C -0.07 -0.79 6.15 -19.56 -0.12 -0.91 16 8 C -0.07 -0.97 8.72 71.24 0.62 -0.35 16 9 C -0.09 -0.63 7.06 40.35 0.28 -0.35 16 10 C 0.59 5.60 7.75 86.45 0.67 6.27 16 11 O -0.57 -10.09 14.46 -4.33 -0.06 -10.15 16 12 N -0.71 -1.25 5.07 -446.51 -2.27 -3.51 16 13 C 0.15 0.33 2.45 44.99 0.11 0.44 16 14 H 0.07 0.46 7.58 -2.39 -0.02 0.44 16 15 C -0.11 0.23 5.24 30.60 0.16 0.39 16 16 C -0.11 0.27 5.66 30.59 0.17 0.44 16 17 C 0.10 -0.25 3.77 30.59 0.12 -0.13 16 18 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 19 O -0.58 0.80 11.97 -148.98 -1.78 -0.98 16 20 C -0.15 0.12 5.64 30.61 0.17 0.30 16 21 C -0.12 -0.32 5.35 30.61 0.16 -0.15 16 22 N -0.52 0.93 5.99 -171.93 -1.03 -0.10 16 23 H 0.10 -1.23 7.13 -2.39 -0.02 -1.25 16 24 H 0.12 -2.04 8.14 -2.39 -0.02 -2.06 16 25 H 0.12 -1.75 5.17 -2.39 -0.01 -1.77 16 26 H 0.08 -0.11 7.96 -2.39 -0.02 -0.13 16 27 H 0.39 -0.92 8.74 -74.05 -0.65 -1.57 16 28 H -0.29 -0.79 7.11 99.48 0.71 -0.08 16 29 H -0.31 -2.26 7.11 99.48 0.71 -1.55 16 30 H 0.05 0.77 8.14 -2.39 -0.02 0.75 16 31 H 0.07 0.83 7.11 -2.39 -0.02 0.81 16 32 H 0.06 0.91 6.48 -2.39 -0.02 0.89 16 33 H 0.41 -2.01 7.73 -92.71 -0.72 -2.73 16 34 H 0.08 -0.15 7.68 -2.39 -0.02 -0.16 16 35 H 0.08 -0.25 8.14 -2.39 -0.02 -0.26 16 36 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 37 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 38 H 0.39 -3.02 9.08 -74.06 -0.67 -3.69 16 39 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 40 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 41 H 0.07 0.15 7.68 -2.39 -0.02 0.13 16 42 H 0.04 0.34 8.14 -2.39 -0.02 0.32 16 43 H 0.43 -4.26 8.19 -92.71 -0.76 -5.02 16 Total: 0.00 -26.84 334.20 -3.26 -30.10 By element: Atomic # 1 Polarization: -16.27 SS G_CDS: -1.69 Total: -17.97 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: 3.32 Total: 6.84 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -3.30 Total: -3.62 kcal Atomic # 8 Polarization: -12.56 SS G_CDS: -3.43 Total: -15.99 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: 1.84 Total: 0.64 kcal Total: -26.84 -3.26 -30.10 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12297754.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.872 kcal (2) G-P(sol) polarization free energy of solvation -26.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.258 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.096 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds