Wall clock time and date at job start Sat Mar 6 2021 23:53:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47250 * 2 1 4 4 C 1.50699 * 109.47107 * 119.99810 * 2 1 3 5 5 C 1.38409 * 119.89536 * 244.97659 * 4 2 1 6 6 C 1.38242 * 120.34371 * 180.02562 * 5 4 2 7 7 C 1.38285 * 120.11471 * 359.72430 * 6 5 4 8 8 F 1.35102 * 120.11109 * 180.27812 * 7 6 5 9 9 C 1.39861 * 119.78064 * 0.57259 * 7 6 5 10 10 C 1.47690 * 120.16785 * 179.70051 * 9 7 6 11 11 O 1.21568 * 120.00086 * 359.72579 * 10 9 7 12 12 N 1.34778 * 119.99859 * 179.72855 * 10 9 7 13 13 C 1.46496 * 120.00072 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.47021 * 34.99856 * 13 12 10 15 15 C 1.53005 * 109.47414 * 154.99744 * 13 12 10 16 16 C 1.52997 * 109.47452 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46817 * 300.00239 * 16 15 13 18 18 H 1.09004 * 109.46733 * 179.97438 * 17 16 15 19 19 O 1.42895 * 109.47081 * 299.99541 * 17 16 15 20 20 C 1.53000 * 109.47233 * 60.00194 * 17 16 15 21 21 C 1.52997 * 109.47060 * 299.99657 * 20 17 16 22 22 C 1.37901 * 119.88426 * 65.00305 * 4 2 1 23 23 H 0.96696 * 114.00351 * 300.00279 * 1 2 3 24 24 H 1.09004 * 109.47312 * 240.00183 * 2 1 3 25 25 H 1.48499 * 110.00461 * 178.68214 * 3 2 1 26 26 H 1.48501 * 110.00043 * 300.00142 * 3 2 1 27 27 H 1.08001 * 119.82590 * 0.02562 * 5 4 2 28 28 H 1.08001 * 119.94466 * 179.97438 * 6 5 4 29 29 H 0.97007 * 120.00235 * 359.97438 * 12 10 9 30 30 H 1.09002 * 109.46935 * 60.00059 * 15 13 12 31 31 H 1.09001 * 109.46812 * 300.00401 * 15 13 12 32 32 H 1.08993 * 109.47194 * 179.97438 * 16 15 13 33 33 H 1.09002 * 109.46695 * 59.99734 * 16 15 13 34 34 H 0.96698 * 114.00503 * 300.00645 * 19 17 16 35 35 H 1.09002 * 109.47398 * 59.99826 * 20 17 16 36 36 H 1.09001 * 109.47194 * 180.02562 * 20 17 16 37 37 H 1.08996 * 109.47853 * 180.02562 * 21 20 17 38 38 H 1.09002 * 109.47153 * 300.00319 * 21 20 17 39 39 H 1.07990 * 120.06842 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6398 -0.0093 2.1908 6 6 3.1053 -0.6518 3.3229 7 6 2.8604 -2.0005 3.5055 8 9 3.3106 -2.6271 4.6145 9 6 2.1505 -2.7151 2.5353 10 6 1.8898 -4.1573 2.7184 11 8 2.2969 -4.7272 3.7120 12 7 1.2005 -4.8415 1.7838 13 6 0.9424 -6.2720 1.9652 14 1 0.7862 -6.4818 3.0234 15 6 -0.3074 -6.6688 1.1768 16 6 -0.5774 -8.1628 1.3667 17 6 0.6219 -8.9661 0.8596 18 1 0.4298 -10.0305 0.9953 19 8 0.8268 -8.6917 -0.5277 20 6 1.8717 -8.5695 1.6480 21 6 2.1416 -7.0755 1.4582 22 6 1.6840 -2.0569 1.3956 23 1 -0.3934 0.4417 0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 3.5346 1.7703 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 2.8299 1.0451 2.0551 28 1 3.6578 -0.0986 4.0680 29 1 0.8753 -4.3866 0.9911 30 1 -0.1513 -6.4591 0.1186 31 1 -1.1619 -6.0967 1.5384 32 1 -1.4680 -8.4453 0.8054 33 1 -0.7336 -8.3720 2.4249 34 1 0.0731 -8.9191 -1.0892 35 1 1.7154 -8.7788 2.7063 36 1 2.7262 -9.1415 1.2865 37 1 3.0322 -6.7929 2.0194 38 1 2.2980 -6.8662 0.3999 39 1 1.1317 -2.6017 0.6443 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:08 Heat of formation + Delta-G solvation = -138.684929 kcal Electronic energy + Delta-G solvation = -24216.639150 eV Core-core repulsion = 20425.834341 eV Total energy + Delta-G solvation = -3790.804809 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -49.84056 -41.44830 -40.42787 -39.43049 -37.59798 -36.64586 -34.46190 -32.71771 -32.35431 -31.88600 -29.60825 -26.73196 -25.55118 -23.91454 -23.72396 -22.55475 -21.44625 -20.89392 -19.27715 -18.35168 -18.31053 -17.77471 -17.61899 -16.89962 -16.79451 -16.53602 -16.29489 -15.90787 -15.72899 -15.69619 -15.51624 -14.86889 -14.49471 -14.40283 -14.33092 -14.17249 -13.78468 -13.38830 -13.29983 -13.20316 -13.13694 -12.84560 -12.48565 -12.27784 -12.11719 -11.96894 -11.63395 -11.30647 -10.99216 -10.80097 -10.57252 -10.40890 -10.04264 -9.83868 -5.17699 -0.50462 -0.10421 1.12085 1.49993 1.68521 1.85508 2.01296 2.50141 3.02362 3.22565 3.24955 3.37090 3.44942 3.50950 3.62818 3.70284 3.86526 3.92600 4.01200 4.06400 4.16097 4.27221 4.30380 4.43118 4.45161 4.48486 4.60313 4.65705 4.76681 4.82677 4.85723 4.88726 4.98333 5.03704 5.07119 5.15608 5.24428 5.36319 5.50621 5.55089 6.39572 6.42743 6.66828 7.17441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.067 4.067 3 Si 0.686 3.314 4 C -0.141 4.141 5 C -0.059 4.059 6 C -0.157 4.157 7 C 0.167 3.833 8 F -0.111 7.111 9 C -0.174 4.174 10 C 0.559 3.441 11 O -0.520 6.520 12 N -0.720 5.720 13 C 0.147 3.853 14 H 0.089 0.911 15 C -0.122 4.122 16 C -0.149 4.149 17 C 0.102 3.898 18 H 0.058 0.942 19 O -0.563 6.563 20 C -0.110 4.110 21 C -0.126 4.126 22 C -0.031 4.031 23 H 0.381 0.619 24 H 0.118 0.882 25 H -0.255 1.255 26 H -0.251 1.251 27 H 0.142 0.858 28 H 0.150 0.850 29 H 0.399 0.601 30 H 0.075 0.925 31 H 0.069 0.931 32 H 0.072 0.928 33 H 0.076 0.924 34 H 0.376 0.624 35 H 0.078 0.922 36 H 0.073 0.927 37 H 0.067 0.933 38 H 0.073 0.927 39 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.564 2.559 -1.730 4.716 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.177 4.177 3 Si 0.587 3.413 4 C -0.142 4.142 5 C -0.077 4.077 6 C -0.176 4.176 7 C 0.146 3.854 8 F -0.089 7.089 9 C -0.178 4.178 10 C 0.346 3.654 11 O -0.397 6.397 12 N -0.372 5.372 13 C 0.043 3.957 14 H 0.107 0.893 15 C -0.160 4.160 16 C -0.187 4.187 17 C 0.043 3.957 18 H 0.076 0.924 19 O -0.369 6.369 20 C -0.148 4.148 21 C -0.164 4.164 22 C -0.050 4.050 23 H 0.228 0.772 24 H 0.135 0.865 25 H -0.179 1.179 26 H -0.176 1.176 27 H 0.159 0.841 28 H 0.168 0.832 29 H 0.235 0.765 30 H 0.094 0.906 31 H 0.088 0.912 32 H 0.090 0.910 33 H 0.095 0.905 34 H 0.223 0.777 35 H 0.097 0.903 36 H 0.092 0.908 37 H 0.085 0.915 38 H 0.092 0.908 39 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.102 2.593 -1.713 3.752 hybrid contribution -0.532 -0.707 -0.521 1.026 sum -2.634 1.887 -2.234 3.935 Atomic orbital electron populations 1.86521 1.16795 1.81668 1.49385 1.25051 0.85455 1.10269 0.96964 0.94806 0.81178 0.77561 0.87720 1.20328 1.01289 0.94615 0.97923 1.21067 0.94729 0.99688 0.92218 1.21172 1.03583 0.92651 1.00150 1.17755 0.94037 0.90443 0.83173 1.91631 1.85897 1.82334 1.49004 1.20107 1.05717 0.94678 0.97329 1.17970 0.78468 0.85842 0.83164 1.90865 1.50203 1.69960 1.28643 1.45947 1.57011 1.10410 1.23848 1.21036 0.94797 0.78778 1.01080 0.89310 1.21707 0.96783 0.96375 1.01181 1.22201 0.98596 0.95144 1.02761 1.21821 0.94800 0.97296 0.81782 0.92413 1.86532 1.44371 1.88374 1.17606 1.21516 0.97320 0.96337 0.99651 1.21826 0.97979 0.94326 1.02297 1.21036 0.95165 0.93777 0.94983 0.77160 0.86505 1.17946 1.17616 0.84099 0.83222 0.76516 0.90596 0.91247 0.90972 0.90534 0.77655 0.90308 0.90797 0.91462 0.90795 0.84389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.04 12.83 -35.23 -0.45 0.59 16 2 C -0.07 0.16 2.80 36.01 0.10 0.26 16 3 Si 0.69 -1.93 29.79 -169.99 -5.06 -7.00 16 4 C -0.14 0.25 5.35 -104.68 -0.56 -0.31 16 5 C -0.06 0.13 8.66 -39.52 -0.34 -0.21 16 6 C -0.16 0.12 10.01 -39.56 -0.40 -0.27 16 7 C 0.17 0.37 7.29 -38.96 -0.28 0.09 16 8 F -0.11 -0.56 15.55 2.25 0.04 -0.52 16 9 C -0.17 -0.30 5.88 -104.91 -0.62 -0.91 16 10 C 0.56 1.95 7.73 -12.40 -0.10 1.85 16 11 O -0.52 -3.85 15.00 5.31 0.08 -3.77 16 12 N -0.72 -0.43 5.03 -54.80 -0.28 -0.71 16 13 C 0.15 0.10 2.45 -67.93 -0.17 -0.06 16 14 H 0.09 0.21 7.58 -51.93 -0.39 -0.18 16 15 C -0.12 0.16 5.24 -26.73 -0.14 0.02 16 16 C -0.15 0.28 5.64 -26.73 -0.15 0.13 16 17 C 0.10 -0.09 3.77 -26.73 -0.10 -0.19 16 18 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 19 O -0.56 0.10 11.97 -35.23 -0.42 -0.32 16 20 C -0.11 -0.04 5.66 -26.73 -0.15 -0.19 16 21 C -0.13 -0.18 5.35 -26.73 -0.14 -0.32 16 22 C -0.03 0.03 9.17 -39.18 -0.36 -0.33 16 23 H 0.38 -2.14 8.70 45.56 0.40 -1.74 16 24 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 25 H -0.25 0.11 7.11 56.52 0.40 0.51 16 26 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 27 H 0.14 -0.67 4.88 -52.49 -0.26 -0.93 16 28 H 0.15 -0.41 8.06 -52.49 -0.42 -0.84 16 29 H 0.40 -0.74 6.64 -40.82 -0.27 -1.01 16 30 H 0.08 -0.10 7.68 -51.93 -0.40 -0.50 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 33 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.38 -1.42 9.08 45.56 0.41 -1.01 16 35 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 36 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.07 0.22 8.14 -51.93 -0.42 -0.20 16 38 H 0.07 0.15 7.68 -51.93 -0.40 -0.25 16 39 H 0.14 -0.36 6.40 -52.49 -0.34 -0.70 16 LS Contribution 321.05 15.07 4.84 4.84 Total: 0.00 -8.78 321.05 -8.90 -17.68 By element: Atomic # 1 Polarization: -6.09 SS G_CDS: -4.24 Total: -10.33 kcal Atomic # 6 Polarization: 2.96 SS G_CDS: -3.41 Total: -0.45 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: -0.28 Total: -0.71 kcal Atomic # 8 Polarization: -2.72 SS G_CDS: -0.79 Total: -3.51 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: -5.06 Total: -7.00 kcal Total LS contribution 4.84 Total: 4.84 kcal Total: -8.78 -8.90 -17.68 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.004 kcal (2) G-P(sol) polarization free energy of solvation -8.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.781 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.681 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.685 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds