Wall clock time and date at job start Sat Mar 6 2021 23:53:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47250 * 2 1 4 4 C 1.50699 * 109.47107 * 119.99810 * 2 1 3 5 5 C 1.38409 * 119.89536 * 244.97659 * 4 2 1 6 6 C 1.38242 * 120.34371 * 180.02562 * 5 4 2 7 7 C 1.38285 * 120.11471 * 359.72430 * 6 5 4 8 8 F 1.35102 * 120.11109 * 180.27812 * 7 6 5 9 9 C 1.39861 * 119.78064 * 0.57259 * 7 6 5 10 10 C 1.47690 * 120.16785 * 179.70051 * 9 7 6 11 11 O 1.21568 * 120.00086 * 359.72579 * 10 9 7 12 12 N 1.34778 * 119.99859 * 179.72855 * 10 9 7 13 13 C 1.46496 * 120.00072 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.47021 * 34.99856 * 13 12 10 15 15 C 1.53005 * 109.47414 * 154.99744 * 13 12 10 16 16 C 1.52997 * 109.47452 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46817 * 300.00239 * 16 15 13 18 18 H 1.09004 * 109.46733 * 179.97438 * 17 16 15 19 19 O 1.42895 * 109.47081 * 299.99541 * 17 16 15 20 20 C 1.53000 * 109.47233 * 60.00194 * 17 16 15 21 21 C 1.52997 * 109.47060 * 299.99657 * 20 17 16 22 22 C 1.37901 * 119.88426 * 65.00305 * 4 2 1 23 23 H 0.96696 * 114.00351 * 300.00279 * 1 2 3 24 24 H 1.09004 * 109.47312 * 240.00183 * 2 1 3 25 25 H 1.48499 * 110.00461 * 178.68214 * 3 2 1 26 26 H 1.48501 * 110.00043 * 300.00142 * 3 2 1 27 27 H 1.08001 * 119.82590 * 0.02562 * 5 4 2 28 28 H 1.08001 * 119.94466 * 179.97438 * 6 5 4 29 29 H 0.97007 * 120.00235 * 359.97438 * 12 10 9 30 30 H 1.09002 * 109.46935 * 60.00059 * 15 13 12 31 31 H 1.09001 * 109.46812 * 300.00401 * 15 13 12 32 32 H 1.08993 * 109.47194 * 179.97438 * 16 15 13 33 33 H 1.09002 * 109.46695 * 59.99734 * 16 15 13 34 34 H 0.96698 * 114.00503 * 300.00645 * 19 17 16 35 35 H 1.09002 * 109.47398 * 59.99826 * 20 17 16 36 36 H 1.09001 * 109.47194 * 180.02562 * 20 17 16 37 37 H 1.08996 * 109.47853 * 180.02562 * 21 20 17 38 38 H 1.09002 * 109.47153 * 300.00319 * 21 20 17 39 39 H 1.07990 * 120.06842 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6398 -0.0093 2.1908 6 6 3.1053 -0.6518 3.3229 7 6 2.8604 -2.0005 3.5055 8 9 3.3106 -2.6271 4.6145 9 6 2.1505 -2.7151 2.5353 10 6 1.8898 -4.1573 2.7184 11 8 2.2969 -4.7272 3.7120 12 7 1.2005 -4.8415 1.7838 13 6 0.9424 -6.2720 1.9652 14 1 0.7862 -6.4818 3.0234 15 6 -0.3074 -6.6688 1.1768 16 6 -0.5774 -8.1628 1.3667 17 6 0.6219 -8.9661 0.8596 18 1 0.4298 -10.0305 0.9953 19 8 0.8268 -8.6917 -0.5277 20 6 1.8717 -8.5695 1.6480 21 6 2.1416 -7.0755 1.4582 22 6 1.6840 -2.0569 1.3956 23 1 -0.3934 0.4417 0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 3.5346 1.7703 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 2.8299 1.0451 2.0551 28 1 3.6578 -0.0986 4.0680 29 1 0.8753 -4.3866 0.9911 30 1 -0.1513 -6.4591 0.1186 31 1 -1.1619 -6.0967 1.5384 32 1 -1.4680 -8.4453 0.8054 33 1 -0.7336 -8.3720 2.4249 34 1 0.0731 -8.9191 -1.0892 35 1 1.7154 -8.7788 2.7063 36 1 2.7262 -9.1415 1.2865 37 1 3.0322 -6.7929 2.0194 38 1 2.2980 -6.8662 0.3999 39 1 1.1317 -2.6017 0.6443 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:07 Heat of formation + Delta-G solvation = -141.179354 kcal Electronic energy + Delta-G solvation = -24216.747316 eV Core-core repulsion = 20425.834341 eV Total energy + Delta-G solvation = -3790.912976 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -50.03700 -41.56198 -40.38965 -39.50369 -37.45515 -36.73478 -34.56176 -32.70291 -32.28936 -31.87640 -29.63336 -26.62941 -25.58323 -23.91944 -23.69718 -22.54215 -21.60178 -20.89077 -19.30190 -18.37128 -18.30917 -17.72264 -17.60679 -16.98211 -16.90697 -16.60919 -16.19376 -15.93006 -15.77807 -15.66478 -15.57622 -14.81583 -14.52323 -14.47759 -14.38074 -14.20191 -13.70069 -13.32903 -13.29323 -13.21216 -13.16808 -12.83999 -12.50699 -12.17478 -12.10557 -11.88764 -11.66021 -11.42095 -11.10815 -10.74222 -10.46621 -10.42373 -10.14340 -9.84986 -4.96884 -0.52291 -0.05559 1.31081 1.57483 1.67709 1.91084 2.02428 2.45225 3.02528 3.31204 3.38113 3.45268 3.54868 3.62903 3.66942 3.73284 3.94157 3.99776 4.06493 4.08784 4.14694 4.33281 4.39170 4.43061 4.46955 4.56449 4.60161 4.74721 4.80765 4.87525 4.92679 4.94230 4.99970 5.09177 5.11787 5.12188 5.20586 5.28162 5.42521 5.57775 6.32647 6.79041 6.92766 7.01035 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.068 4.068 3 Si 0.772 3.228 4 C -0.134 4.134 5 C -0.049 4.049 6 C -0.151 4.151 7 C 0.133 3.867 8 F -0.137 7.137 9 C -0.190 4.190 10 C 0.553 3.447 11 O -0.571 6.571 12 N -0.706 5.706 13 C 0.147 3.853 14 H 0.069 0.931 15 C -0.115 4.115 16 C -0.146 4.146 17 C 0.104 3.896 18 H 0.068 0.932 19 O -0.580 6.580 20 C -0.114 4.114 21 C -0.119 4.119 22 C -0.026 4.026 23 H 0.397 0.603 24 H 0.117 0.883 25 H -0.282 1.282 26 H -0.301 1.301 27 H 0.171 0.829 28 H 0.169 0.831 29 H 0.413 0.587 30 H 0.082 0.918 31 H 0.077 0.923 32 H 0.091 0.909 33 H 0.076 0.924 34 H 0.392 0.608 35 H 0.080 0.920 36 H 0.066 0.934 37 H 0.039 0.961 38 H 0.069 0.931 39 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.784 3.557 -2.890 6.625 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.178 4.178 3 Si 0.678 3.322 4 C -0.135 4.135 5 C -0.066 4.066 6 C -0.170 4.170 7 C 0.112 3.888 8 F -0.115 7.115 9 C -0.194 4.194 10 C 0.341 3.659 11 O -0.451 6.451 12 N -0.358 5.358 13 C 0.043 3.957 14 H 0.087 0.913 15 C -0.152 4.152 16 C -0.184 4.184 17 C 0.046 3.954 18 H 0.086 0.914 19 O -0.388 6.388 20 C -0.152 4.152 21 C -0.157 4.157 22 C -0.045 4.045 23 H 0.248 0.752 24 H 0.135 0.865 25 H -0.209 1.209 26 H -0.229 1.229 27 H 0.188 0.812 28 H 0.187 0.813 29 H 0.251 0.749 30 H 0.100 0.900 31 H 0.096 0.904 32 H 0.110 0.890 33 H 0.094 0.906 34 H 0.242 0.758 35 H 0.099 0.901 36 H 0.084 0.916 37 H 0.058 0.942 38 H 0.088 0.912 39 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -3.366 3.582 -2.892 5.703 hybrid contribution -0.161 -0.956 -0.266 1.005 sum -3.527 2.626 -3.157 5.413 Atomic orbital electron populations 1.86495 1.16732 1.82085 1.50639 1.25142 0.85589 1.10567 0.96484 0.93839 0.78021 0.74925 0.85384 1.20490 1.00659 0.94203 0.98151 1.21387 0.93255 1.00919 0.91078 1.21410 1.03157 0.91363 1.01022 1.18224 0.95664 0.91829 0.83060 1.91558 1.86519 1.83042 1.50391 1.20077 1.07027 0.93741 0.98535 1.18374 0.77987 0.86759 0.82801 1.90828 1.52448 1.71112 1.30741 1.45881 1.55846 1.10409 1.23667 1.21042 0.95645 0.78673 1.00357 0.91315 1.21669 0.95562 0.97029 1.00982 1.22197 0.98796 0.94327 1.03048 1.21779 0.94152 0.97995 0.81491 0.91406 1.86493 1.45749 1.88588 1.18009 1.21547 0.98133 0.95294 1.00216 1.21723 0.97250 0.95420 1.01336 1.21192 0.94747 0.94320 0.94232 0.75236 0.86543 1.20865 1.22932 0.81218 0.81324 0.74925 0.89974 0.90440 0.89046 0.90567 0.75818 0.90133 0.91559 0.94215 0.91237 0.82736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 3.14 12.83 -148.98 -1.91 1.23 16 2 C -0.07 0.43 2.80 71.24 0.20 0.63 16 3 Si 0.77 -5.46 29.79 68.60 2.04 -3.41 16 4 C -0.13 0.66 5.35 -19.90 -0.11 0.56 16 5 C -0.05 0.30 8.66 22.31 0.19 0.50 16 6 C -0.15 0.29 10.01 22.28 0.22 0.51 16 7 C 0.13 0.80 7.29 22.67 0.17 0.96 16 8 F -0.14 -1.79 15.55 44.97 0.70 -1.09 16 9 C -0.19 -0.89 5.88 -20.05 -0.12 -1.00 16 10 C 0.55 5.12 7.73 86.74 0.67 5.79 16 11 O -0.57 -10.53 15.00 -3.93 -0.06 -10.59 16 12 N -0.71 -1.73 5.03 -445.56 -2.24 -3.97 16 13 C 0.15 0.41 2.45 44.99 0.11 0.52 16 14 H 0.07 0.50 7.58 -2.39 -0.02 0.48 16 15 C -0.11 0.35 5.24 30.60 0.16 0.51 16 16 C -0.15 0.66 5.64 30.59 0.17 0.84 16 17 C 0.10 -0.21 3.77 30.60 0.12 -0.09 16 18 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 19 O -0.58 0.53 11.97 -148.98 -1.78 -1.26 16 20 C -0.11 -0.24 5.66 30.59 0.17 -0.06 16 21 C -0.12 -0.58 5.35 30.59 0.16 -0.41 16 22 C -0.03 0.06 9.17 22.53 0.21 0.26 16 23 H 0.40 -5.31 8.70 -74.06 -0.64 -5.96 16 24 H 0.12 -0.69 7.96 -2.38 -0.02 -0.71 16 25 H -0.28 0.65 7.11 99.48 0.71 1.36 16 26 H -0.30 -0.46 7.11 99.48 0.71 0.25 16 27 H 0.17 -2.09 4.88 -2.91 -0.01 -2.10 16 28 H 0.17 -1.07 8.06 -2.91 -0.02 -1.09 16 29 H 0.41 -1.48 6.64 -92.70 -0.62 -2.10 16 30 H 0.08 -0.32 7.68 -2.39 -0.02 -0.33 16 31 H 0.08 -0.33 8.14 -2.39 -0.02 -0.34 16 32 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 33 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 34 H 0.39 -3.42 9.08 -74.06 -0.67 -4.09 16 35 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 36 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 37 H 0.04 0.40 8.14 -2.39 -0.02 0.38 16 38 H 0.07 0.38 7.68 -2.39 -0.02 0.37 16 39 H 0.16 -0.97 6.40 -2.92 -0.02 -0.99 16 Total: 0.00 -23.80 321.05 -1.71 -25.51 By element: Atomic # 1 Polarization: -15.15 SS G_CDS: -0.78 Total: -15.94 kcal Atomic # 6 Polarization: 7.18 SS G_CDS: 2.33 Total: 9.51 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -2.24 Total: -3.97 kcal Atomic # 8 Polarization: -6.86 SS G_CDS: -3.75 Total: -10.61 kcal Atomic # 9 Polarization: -1.79 SS G_CDS: 0.70 Total: -1.09 kcal Atomic # 14 Polarization: -5.46 SS G_CDS: 2.04 Total: -3.41 kcal Total: -23.80 -1.71 -25.51 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.669 kcal (2) G-P(sol) polarization free energy of solvation -23.804 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.473 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.706 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.511 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.179 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds