Wall clock time and date at job start Sat Mar 6 2021 23:53:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50697 * 109.46996 * 120.00351 * 2 1 3 5 5 C 1.38238 * 120.00008 * 244.72486 * 4 2 1 6 6 C 1.38235 * 120.00181 * 179.80862 * 5 4 2 7 7 C 1.38232 * 119.99720 * 0.39527 * 6 5 4 8 8 C 1.50703 * 119.99482 * 179.83265 * 7 6 5 9 9 C 1.50696 * 109.47390 * 270.02228 * 8 7 6 10 10 O 1.21291 * 119.99936 * 0.02562 * 9 8 7 11 11 N 1.34770 * 120.00450 * 180.02562 * 9 8 7 12 12 C 1.46507 * 120.00496 * 180.02562 * 11 9 8 13 13 H 1.08996 * 109.46762 * 324.99577 * 12 11 9 14 14 C 1.52999 * 109.47187 * 84.99348 * 12 11 9 15 15 C 1.52992 * 109.47109 * 180.02562 * 14 12 11 16 16 C 1.53003 * 109.47646 * 300.00566 * 15 14 12 17 17 H 1.08998 * 109.47525 * 179.97438 * 16 15 14 18 18 O 1.42898 * 109.46827 * 299.99846 * 16 15 14 19 19 C 1.53000 * 109.46855 * 59.99323 * 16 15 14 20 20 C 1.52993 * 109.47544 * 300.00177 * 19 16 15 21 21 C 1.38228 * 120.00287 * 359.85775 * 7 6 5 22 22 C 1.38234 * 120.00438 * 64.99275 * 4 2 1 23 23 H 0.96696 * 114.00036 * 299.99991 * 1 2 3 24 24 H 1.09001 * 109.47103 * 239.99639 * 2 1 3 25 25 H 1.48502 * 109.99925 * 178.68072 * 3 2 1 26 26 H 1.48497 * 109.99842 * 299.99834 * 3 2 1 27 27 H 1.07998 * 119.99418 * 0.02562 * 5 4 2 28 28 H 1.08001 * 119.99731 * 180.23256 * 6 5 4 29 29 H 1.08992 * 109.47492 * 30.02638 * 8 7 6 30 30 H 1.09006 * 109.46967 * 150.02608 * 8 7 6 31 31 H 0.97007 * 119.99992 * 359.97438 * 11 9 8 32 32 H 1.08997 * 109.47296 * 300.00673 * 14 12 11 33 33 H 1.09007 * 109.46849 * 60.00775 * 14 12 11 34 34 H 1.09003 * 109.47457 * 180.02562 * 15 14 12 35 35 H 1.09006 * 109.47309 * 60.00287 * 15 14 12 36 36 H 0.96700 * 114.00461 * 299.99611 * 18 16 15 37 37 H 1.09007 * 109.46941 * 180.02562 * 19 16 15 38 38 H 1.09006 * 109.46837 * 60.01052 * 19 16 15 39 39 H 1.08997 * 109.47773 * 300.00178 * 20 19 16 40 40 H 1.09008 * 109.47183 * 179.97438 * 20 19 16 41 41 H 1.08003 * 120.00447 * 179.97438 * 21 7 6 42 42 H 1.08002 * 119.99628 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6436 -0.0136 2.1885 6 6 3.1010 -0.6645 3.3191 7 6 2.8531 -2.0139 3.4876 8 6 3.3550 -2.7241 4.7184 9 6 4.7361 -3.2673 4.4568 10 8 5.2615 -3.0943 3.3774 11 7 5.3876 -3.9454 5.4223 12 6 6.7306 -4.4729 5.1682 13 1 6.8043 -4.7938 4.1292 14 6 7.7673 -3.3809 5.4395 15 6 9.1697 -3.9317 5.1735 16 6 9.4324 -5.1246 6.0949 17 1 10.4314 -5.5172 5.9051 18 8 9.3362 -4.7043 7.4573 19 6 8.3956 -6.2165 5.8237 20 6 6.9933 -5.6658 6.0897 21 6 2.1454 -2.7119 2.5271 22 6 1.6846 -2.0602 1.3984 23 1 -0.3933 0.4417 0.7650 24 1 1.7924 -0.5139 -0.8900 25 1 3.5347 1.7702 0.0321 26 1 1.5616 2.4678 -1.2085 27 1 2.8398 1.0400 2.0554 28 1 3.6543 -0.1191 4.0694 29 1 3.3921 -2.0236 5.5525 30 1 2.6819 -3.5458 4.9636 31 1 4.9677 -4.0835 6.2858 32 1 7.5804 -2.5313 4.7828 33 1 7.6936 -3.0600 6.4786 34 1 9.9083 -3.1538 5.3672 35 1 9.2431 -4.2523 4.1343 36 1 9.9656 -4.0117 7.7008 37 1 8.5825 -7.0662 6.4804 38 1 8.4691 -6.5371 4.7844 39 1 6.9198 -5.3452 7.1289 40 1 6.2546 -6.4437 5.8960 41 1 1.9520 -3.7663 2.6585 42 1 1.1315 -2.6055 0.6479 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12335836.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:11 Heat of formation + Delta-G solvation = -103.958252 kcal Electronic energy + Delta-G solvation = -23208.302609 eV Core-core repulsion = 19732.920018 eV Total energy + Delta-G solvation = -3475.382591 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 292.151 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.31169 -40.47128 -39.51974 -37.60684 -36.62340 -34.34965 -33.88411 -31.89506 -31.89173 -30.47664 -28.95964 -25.73680 -23.87611 -23.76377 -23.41303 -21.98945 -21.33043 -20.79460 -18.41786 -18.15905 -17.79297 -17.49647 -16.93531 -16.70955 -16.33016 -16.17377 -15.96655 -15.73680 -15.36836 -14.87301 -14.66677 -14.49807 -14.42054 -14.11744 -13.94480 -13.68222 -13.28796 -13.20564 -13.09601 -13.02912 -12.81209 -12.49375 -12.16350 -12.09214 -11.91861 -11.65190 -11.61962 -11.31731 -10.95931 -10.68921 -10.37533 -10.01094 -9.81391 -9.56761 -4.99662 0.29259 0.51527 1.34720 1.69378 1.69825 2.02489 2.14707 2.82628 3.23473 3.50405 3.61266 3.63105 3.65745 3.79757 3.88233 3.92102 3.96519 4.04884 4.06440 4.16658 4.26100 4.34770 4.40855 4.42702 4.44726 4.50823 4.56807 4.60151 4.73105 4.83502 4.88032 4.97791 5.03152 5.09788 5.10755 5.11825 5.22138 5.32603 5.42404 5.54029 5.59605 5.63253 6.04865 6.51642 6.61696 6.64515 7.27992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.068 4.068 3 Si 0.686 3.314 4 C -0.119 4.119 5 C -0.114 4.114 6 C -0.100 4.100 7 C -0.062 4.062 8 C -0.104 4.104 9 C 0.514 3.486 10 O -0.529 6.529 11 N -0.729 5.729 12 C 0.146 3.854 13 H 0.085 0.915 14 C -0.124 4.124 15 C -0.151 4.151 16 C 0.102 3.898 17 H 0.057 0.943 18 O -0.564 6.564 19 C -0.109 4.109 20 C -0.123 4.123 21 C -0.104 4.104 22 C -0.091 4.091 23 H 0.378 0.622 24 H 0.113 0.887 25 H -0.258 1.258 26 H -0.255 1.255 27 H 0.126 0.874 28 H 0.124 0.876 29 H 0.105 0.895 30 H 0.105 0.895 31 H 0.401 0.599 32 H 0.065 0.935 33 H 0.070 0.930 34 H 0.068 0.932 35 H 0.074 0.926 36 H 0.377 0.623 37 H 0.075 0.925 38 H 0.078 0.922 39 H 0.078 0.922 40 H 0.068 0.932 41 H 0.122 0.878 42 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.094 0.093 5.741 5.742 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.588 3.412 4 C -0.120 4.120 5 C -0.131 4.131 6 C -0.118 4.118 7 C -0.062 4.062 8 C -0.144 4.144 9 C 0.300 3.700 10 O -0.404 6.404 11 N -0.381 5.381 12 C 0.042 3.958 13 H 0.103 0.897 14 C -0.162 4.162 15 C -0.189 4.189 16 C 0.043 3.957 17 H 0.075 0.925 18 O -0.370 6.370 19 C -0.147 4.147 20 C -0.161 4.161 21 C -0.122 4.122 22 C -0.109 4.109 23 H 0.226 0.774 24 H 0.130 0.870 25 H -0.183 1.183 26 H -0.180 1.180 27 H 0.143 0.857 28 H 0.142 0.858 29 H 0.123 0.877 30 H 0.123 0.877 31 H 0.235 0.765 32 H 0.084 0.916 33 H 0.089 0.911 34 H 0.087 0.913 35 H 0.093 0.907 36 H 0.225 0.775 37 H 0.094 0.906 38 H 0.097 0.903 39 H 0.096 0.904 40 H 0.086 0.914 41 H 0.140 0.860 42 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 0.571 0.051 3.960 4.001 hybrid contribution 0.481 -0.310 0.232 0.618 sum 1.052 -0.259 4.192 4.330 Atomic orbital electron populations 1.86504 1.17133 1.81718 1.49196 1.25053 0.85170 1.10097 0.97583 0.94824 0.81187 0.78107 0.87053 1.20308 0.99835 0.95098 0.96730 1.20915 0.98801 0.99121 0.94286 1.20904 0.99182 0.93993 0.97736 1.19267 0.97872 0.93741 0.95356 1.20702 0.94250 1.01639 0.97809 1.20579 0.87310 0.77917 0.84183 1.90755 1.68514 1.56890 1.24256 1.46101 1.17940 1.57291 1.16727 1.20982 0.81059 0.93308 1.00459 0.89659 1.21801 0.93720 0.98315 1.02404 1.22222 0.97399 0.98490 1.00791 1.21807 0.98228 0.93930 0.81708 0.92477 1.86500 1.63060 1.60195 1.27223 1.21498 0.93544 0.97437 1.02246 1.21712 0.97115 0.96771 1.00468 1.21013 0.97823 0.99594 0.93750 1.20958 0.98736 0.93740 0.97439 0.77440 0.87011 1.18286 1.18029 0.85651 0.85805 0.87673 0.87726 0.76525 0.91606 0.91090 0.91306 0.90731 0.77542 0.90591 0.90332 0.90354 0.91362 0.86020 0.85701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.62 12.83 -35.23 -0.45 -1.07 16 2 C -0.07 -0.07 2.80 36.00 0.10 0.03 16 3 Si 0.69 0.05 29.80 -169.99 -5.07 -5.02 16 4 C -0.12 -0.20 5.35 -104.63 -0.56 -0.76 16 5 C -0.11 -0.11 8.67 -39.58 -0.34 -0.46 16 6 C -0.10 -0.10 9.70 -39.58 -0.38 -0.49 16 7 C -0.06 -0.07 4.37 -104.63 -0.46 -0.53 16 8 C -0.10 0.15 5.83 -29.04 -0.17 -0.02 16 9 C 0.51 0.68 7.79 -10.99 -0.09 0.59 16 10 O -0.53 -3.10 15.70 5.55 0.09 -3.02 16 11 N -0.73 0.63 5.08 -53.80 -0.27 0.36 16 12 C 0.15 0.01 2.45 -67.93 -0.17 -0.16 16 13 H 0.09 0.18 7.58 -51.93 -0.39 -0.22 16 14 C -0.12 -0.02 5.35 -26.74 -0.14 -0.16 16 15 C -0.15 0.14 5.64 -26.73 -0.15 -0.01 16 16 C 0.10 -0.11 3.77 -26.73 -0.10 -0.21 16 17 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 18 O -0.56 0.27 11.97 -35.23 -0.42 -0.15 16 19 C -0.11 0.12 5.66 -26.73 -0.15 -0.04 16 20 C -0.12 0.13 5.25 -26.73 -0.14 -0.01 16 21 C -0.10 -0.17 9.70 -39.59 -0.38 -0.55 16 22 C -0.09 -0.19 9.69 -39.58 -0.38 -0.57 16 23 H 0.38 -1.08 8.70 45.56 0.40 -0.68 16 24 H 0.11 0.19 7.96 -51.93 -0.41 -0.22 16 25 H -0.26 -0.72 7.11 56.52 0.40 -0.31 16 26 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 27 H 0.13 -0.13 4.91 -52.49 -0.26 -0.38 16 28 H 0.12 -0.09 8.06 -52.49 -0.42 -0.52 16 29 H 0.11 -0.37 8.08 -51.93 -0.42 -0.79 16 30 H 0.10 -0.36 8.09 -51.93 -0.42 -0.78 16 31 H 0.40 -1.40 8.60 -40.82 -0.35 -1.75 16 32 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 33 H 0.07 0.01 7.68 -51.92 -0.40 -0.39 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.38 -1.41 9.08 45.56 0.41 -0.99 16 37 H 0.08 -0.07 8.14 -51.92 -0.42 -0.49 16 38 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.08 -0.05 7.68 -51.93 -0.40 -0.44 16 40 H 0.07 -0.10 8.14 -51.92 -0.42 -0.52 16 41 H 0.12 0.02 8.06 -52.48 -0.42 -0.40 16 42 H 0.13 0.19 8.06 -52.49 -0.42 -0.24 16 LS Contribution 341.16 15.07 5.14 5.14 Total: 0.00 -8.81 341.16 -10.17 -18.98 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -5.67 Total: -11.88 kcal Atomic # 6 Polarization: 0.18 SS G_CDS: -3.52 Total: -3.34 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: -0.27 Total: 0.36 kcal Atomic # 8 Polarization: -3.45 SS G_CDS: -0.79 Total: -4.24 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.07 Total: -5.02 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -8.81 -10.17 -18.98 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12335836.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.975 kcal (2) G-P(sol) polarization free energy of solvation -8.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.172 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.958 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds