Wall clock time and date at job start Sat Mar 6 2021 23:53:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86293 * 109.47340 * 2 1 4 4 C 1.50702 * 109.46871 * 119.99963 * 2 1 3 5 5 C 1.34454 * 126.48074 * 255.02149 * 4 2 1 6 6 N 1.36568 * 109.98222 * 179.97438 * 5 4 2 7 7 C 1.37830 * 109.86374 * 359.97438 * 6 5 4 8 8 C 1.38647 * 133.38324 * 180.02562 * 7 6 5 9 9 C 1.39322 * 119.66804 * 180.02562 * 8 7 6 10 10 C 1.47572 * 119.82927 * 179.97438 * 9 8 7 11 11 O 1.21589 * 120.00415 * 359.97438 * 10 9 8 12 12 N 1.34780 * 119.99761 * 180.02562 * 10 9 8 13 13 C 1.46492 * 120.00132 * 179.97438 * 12 10 9 14 14 H 1.09000 * 109.47152 * 34.99769 * 13 12 10 15 15 C 1.53006 * 109.47363 * 154.99846 * 13 12 10 16 16 C 1.52997 * 109.47127 * 59.99700 * 15 13 12 17 17 C 1.53002 * 109.46817 * 60.00361 * 16 15 13 18 18 H 1.08996 * 109.47407 * 60.00219 * 17 16 15 19 19 O 1.42911 * 109.46810 * 179.97438 * 17 16 15 20 20 C 1.52996 * 109.46972 * 299.99733 * 17 16 15 21 21 C 1.52997 * 109.47131 * 60.00459 * 20 17 16 22 22 C 1.40204 * 120.33334 * 0.25606 * 9 8 7 23 23 C 1.36238 * 120.37745 * 359.46066 * 22 9 8 24 24 C 1.39872 * 119.95913 * 0.55450 * 23 22 9 25 25 H 0.96705 * 114.00002 * 60.00437 * 1 2 3 26 26 H 1.09002 * 109.46912 * 239.99482 * 2 1 3 27 27 H 1.48497 * 109.99910 * 298.67750 * 3 2 1 28 28 H 1.48496 * 110.00364 * 59.99990 * 3 2 1 29 29 H 1.07991 * 125.01082 * 0.02562 * 5 4 2 30 30 H 0.96997 * 125.06765 * 179.97438 * 6 5 4 31 31 H 1.07999 * 120.16371 * 359.97438 * 8 7 6 32 32 H 0.97006 * 119.99905 * 359.97438 * 12 10 9 33 33 H 1.09001 * 109.46801 * 179.97438 * 15 13 12 34 34 H 1.09001 * 109.46998 * 299.99569 * 15 13 12 35 35 H 1.09002 * 109.47153 * 180.02562 * 16 15 13 36 36 H 1.08996 * 109.46952 * 300.00302 * 16 15 13 37 37 H 0.96698 * 113.99178 * 179.97438 * 19 17 16 38 38 H 1.09001 * 109.46993 * 180.02562 * 20 17 16 39 39 H 1.09000 * 109.47380 * 299.99696 * 20 17 16 40 40 H 1.09002 * 109.47153 * 179.97438 * 21 20 17 41 41 H 1.08993 * 109.47194 * 60.00154 * 21 20 17 42 42 H 1.07999 * 119.81002 * 179.72609 * 22 9 8 43 43 H 1.08005 * 120.01743 * 180.28091 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4611 -0.1363 2.3247 6 7 2.8025 -1.0947 3.2358 7 6 2.4933 -2.3431 2.7403 8 6 2.6287 -3.6278 3.2437 9 6 2.2111 -4.7155 2.4797 10 6 2.3542 -6.0845 3.0118 11 8 2.8358 -6.2611 4.1141 12 7 1.9518 -7.1391 2.2753 13 6 2.0942 -8.4982 2.8032 14 1 1.9301 -8.4885 3.8808 15 6 1.0644 -9.4141 2.1387 16 6 1.2947 -9.4277 0.6262 17 6 2.7037 -9.9450 0.3296 18 1 2.8098 -10.9562 0.7224 19 8 2.9187 -9.9582 -1.0832 20 6 3.7336 -9.0291 0.9941 21 6 3.5032 -9.0155 2.5066 22 6 1.6612 -4.5162 1.2055 23 6 1.5192 -3.2569 0.7056 24 6 1.9341 -2.1548 1.4604 25 1 -0.3933 0.4417 -0.7651 26 1 1.7922 -0.5139 -0.8900 27 1 1.5880 2.4584 -1.2243 28 1 1.5615 2.4679 1.2084 29 1 2.5960 0.9262 2.4632 30 1 3.2029 -0.9225 4.1023 31 1 3.0566 -3.7847 4.2229 32 1 1.5678 -6.9983 1.3957 33 1 1.1707 -10.4254 2.5312 34 1 0.0605 -9.0456 2.3501 35 1 0.5607 -10.0798 0.1528 36 1 1.1887 -8.4165 0.2335 37 1 3.7939 -10.2754 -1.3448 38 1 4.7374 -9.3974 0.7824 39 1 3.6276 -8.0179 0.6013 40 1 4.2372 -8.3634 2.9800 41 1 3.6093 -10.0267 2.8994 42 1 1.3443 -5.3657 0.6186 43 1 1.0906 -3.1098 -0.2748 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12335838.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:13 Heat of formation + Delta-G solvation = -59.195703 kcal Electronic energy + Delta-G solvation = -26441.815088 eV Core-core repulsion = 22646.495355 eV Total energy + Delta-G solvation = -3795.319733 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.42706 -41.27218 -39.56263 -37.89494 -37.51343 -36.90747 -34.00634 -33.31721 -31.95039 -30.93182 -30.70559 -29.38015 -26.47275 -24.86891 -23.84049 -23.57146 -23.13358 -21.67763 -20.57740 -20.21119 -19.27226 -18.45493 -18.35900 -18.20915 -17.35021 -16.82455 -16.65673 -16.06171 -15.86928 -15.67162 -15.38114 -15.24177 -15.00931 -14.73468 -14.71720 -14.53917 -14.45224 -14.05049 -13.94748 -13.81738 -13.34118 -13.16754 -12.88707 -12.63394 -12.55438 -12.25448 -12.23472 -12.13463 -11.83149 -11.76821 -11.26962 -10.84224 -10.79669 -10.68848 -10.37982 -10.01450 -9.29528 -8.76119 -4.98676 -0.20159 0.44704 1.27623 1.39969 1.55693 1.90726 1.94689 2.07248 2.29811 2.98225 3.12839 3.48412 3.57673 3.64448 3.65902 3.75694 3.83143 3.97395 4.00838 4.01133 4.12550 4.14759 4.27579 4.29124 4.34864 4.42153 4.46218 4.52151 4.57524 4.62797 4.76607 4.77627 4.95680 5.00549 5.02749 5.03976 5.07596 5.20467 5.26970 5.30255 5.48444 5.49847 5.59369 5.65591 6.03737 6.41571 6.51956 6.56025 6.66207 7.30773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.038 4.038 3 Si 0.681 3.319 4 C -0.164 4.164 5 C 0.079 3.921 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.056 4.056 9 C -0.122 4.122 10 C 0.564 3.436 11 O -0.539 6.539 12 N -0.719 5.719 13 C 0.144 3.856 14 H 0.094 0.906 15 C -0.126 4.126 16 C -0.115 4.115 17 C 0.103 3.897 18 H 0.057 0.943 19 O -0.569 6.569 20 C -0.151 4.151 21 C -0.129 4.129 22 C -0.114 4.114 23 C -0.072 4.072 24 C -0.063 4.063 25 H 0.377 0.623 26 H 0.073 0.927 27 H -0.260 1.260 28 H -0.255 1.255 29 H 0.177 0.823 30 H 0.422 0.578 31 H 0.136 0.864 32 H 0.400 0.600 33 H 0.084 0.916 34 H 0.079 0.921 35 H 0.076 0.924 36 H 0.067 0.933 37 H 0.379 0.621 38 H 0.066 0.934 39 H 0.071 0.929 40 H 0.073 0.927 41 H 0.075 0.925 42 H 0.124 0.876 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.204 0.836 -2.462 3.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.148 4.148 3 Si 0.582 3.418 4 C -0.171 4.171 5 C -0.049 4.049 6 N -0.186 5.186 7 C -0.024 4.024 8 C -0.077 4.077 9 C -0.127 4.127 10 C 0.352 3.648 11 O -0.417 6.417 12 N -0.373 5.373 13 C 0.039 3.961 14 H 0.112 0.888 15 C -0.164 4.164 16 C -0.152 4.152 17 C 0.045 3.955 18 H 0.075 0.925 19 O -0.375 6.375 20 C -0.189 4.189 21 C -0.168 4.168 22 C -0.133 4.133 23 C -0.090 4.090 24 C -0.068 4.068 25 H 0.224 0.776 26 H 0.091 0.909 27 H -0.185 1.185 28 H -0.179 1.179 29 H 0.194 0.806 30 H 0.260 0.740 31 H 0.154 0.846 32 H 0.237 0.763 33 H 0.102 0.898 34 H 0.097 0.903 35 H 0.095 0.905 36 H 0.086 0.914 37 H 0.227 0.773 38 H 0.084 0.916 39 H 0.090 0.910 40 H 0.092 0.908 41 H 0.093 0.907 42 H 0.142 0.858 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.867 1.486 -0.990 2.583 hybrid contribution -0.506 -0.153 -0.548 0.761 sum 1.361 1.333 -1.538 2.448 Atomic orbital electron populations 1.86643 1.18258 1.79970 1.49498 1.24016 0.83900 1.09873 0.97043 0.95232 0.91508 0.74473 0.80636 1.19500 1.09405 0.91359 0.96879 1.21741 0.99872 0.94411 0.88903 1.41690 1.54819 1.04007 1.18062 1.18062 1.03308 0.86314 0.94737 1.20067 0.99462 0.88037 1.00122 1.19429 1.05082 0.92396 0.95761 1.18155 0.77472 0.84560 0.84582 1.90785 1.44450 1.86254 1.20218 1.46028 1.64350 1.05822 1.21082 1.20992 0.94836 0.80706 0.99533 0.88816 1.21829 0.99342 1.00513 0.94728 1.21483 0.95839 1.02200 0.95727 1.21835 0.95000 0.97783 0.80926 0.92529 1.86511 1.39047 1.89515 1.22387 1.22247 0.99270 1.01356 0.96024 1.21884 0.97171 1.02028 0.95710 1.20670 1.00679 0.97256 0.94732 1.20161 0.98741 0.90464 0.99643 1.19165 1.00948 0.92999 0.93649 0.77587 0.90926 1.18455 1.17918 0.80649 0.73961 0.84603 0.76273 0.89774 0.90266 0.90550 0.91432 0.77325 0.91560 0.91004 0.90804 0.90661 0.85799 0.85345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.72 12.86 -35.23 -0.45 -1.18 16 2 C -0.04 0.00 3.05 36.01 0.11 0.11 16 3 Si 0.68 -1.12 30.79 -169.99 -5.23 -6.35 16 4 C -0.16 -0.23 5.61 -102.74 -0.58 -0.80 16 5 C 0.08 -0.03 10.43 -16.78 -0.17 -0.20 16 6 N -0.58 0.20 6.07 -10.68 -0.06 0.13 16 7 C 0.08 0.17 7.26 -84.00 -0.61 -0.44 16 8 C -0.06 -0.15 9.61 -39.03 -0.37 -0.52 16 9 C -0.12 -0.30 5.87 -104.95 -0.62 -0.92 16 10 C 0.56 1.81 7.72 -12.45 -0.10 1.72 16 11 O -0.54 -3.49 15.97 5.29 0.08 -3.41 16 12 N -0.72 -0.30 4.18 -54.84 -0.23 -0.53 16 13 C 0.14 -0.01 2.78 -67.93 -0.19 -0.20 16 14 H 0.09 0.13 7.58 -51.93 -0.39 -0.27 16 15 C -0.13 0.23 5.61 -26.73 -0.15 0.08 16 16 C -0.11 0.14 5.40 -26.73 -0.14 -0.01 16 17 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 18 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 19 O -0.57 -0.20 13.32 -35.23 -0.47 -0.67 16 20 C -0.15 0.12 5.39 -26.73 -0.14 -0.02 16 21 C -0.13 0.03 5.60 -26.73 -0.15 -0.12 16 22 C -0.11 -0.11 9.46 -39.56 -0.37 -0.48 16 23 C -0.07 -0.12 10.03 -39.69 -0.40 -0.51 16 24 C -0.06 -0.16 6.35 -105.04 -0.67 -0.83 16 25 H 0.38 -1.01 8.74 45.56 0.40 -0.62 16 26 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 27 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 28 H -0.25 -0.22 7.04 56.52 0.40 0.18 16 29 H 0.18 -0.55 6.30 -52.49 -0.33 -0.88 16 30 H 0.42 -1.37 8.96 -40.82 -0.37 -1.74 16 31 H 0.14 0.31 7.62 -52.49 -0.40 -0.09 16 32 H 0.40 -0.50 4.86 -40.82 -0.20 -0.70 16 33 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.07 -0.08 6.50 -51.93 -0.34 -0.42 16 37 H 0.38 -1.21 9.08 45.56 0.41 -0.80 16 38 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.07 0.01 7.60 -51.93 -0.39 -0.38 16 40 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 41 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 42 H 0.12 -0.19 6.36 -52.49 -0.33 -0.52 16 43 H 0.13 0.02 8.06 -52.48 -0.42 -0.40 16 LS Contribution 347.60 15.07 5.24 5.24 Total: 0.00 -9.82 347.60 -10.71 -20.53 By element: Atomic # 1 Polarization: -5.50 SS G_CDS: -4.94 Total: -10.44 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -4.65 Total: -3.32 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.29 Total: -0.40 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -0.84 Total: -5.26 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.23 Total: -6.35 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -9.82 -10.71 -20.53 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12335838.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.665 kcal (2) G-P(sol) polarization free energy of solvation -9.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.481 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.715 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.531 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.196 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds