Wall clock time and date at job start Sat Mar 6 2021 23:53:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.34856 * 125.89985 * 2 1 4 4 C 1.40944 * 107.46029 * 180.23754 * 3 2 1 5 5 C 1.50709 * 126.26062 * 179.77717 * 4 3 2 6 6 O 1.42897 * 109.47104 * 254.97723 * 5 4 3 7 7 Si 1.86300 * 109.47122 * 14.97682 * 5 4 3 8 8 C 1.34844 * 107.47209 * 359.75780 * 4 3 2 9 9 C 1.50699 * 125.89872 * 179.97438 * 8 4 3 10 10 N 1.36566 * 108.20195 * 0.02562 * 8 4 3 11 11 C 1.40225 * 125.66794 * 179.97438 * 10 8 4 12 12 C 1.38549 * 119.98881 * 245.27397 * 11 10 8 13 13 C 1.39501 * 119.78248 * 180.25360 * 12 11 10 14 14 C 1.47863 * 120.11626 * 179.74338 * 13 12 11 15 15 O 1.21549 * 119.99508 * 359.72272 * 14 13 12 16 16 N 1.34771 * 120.00220 * 179.72507 * 14 13 12 17 17 C 1.46500 * 120.00215 * 179.97438 * 16 14 13 18 18 H 1.09006 * 109.47173 * 325.00344 * 17 16 14 19 19 C 1.53009 * 109.46972 * 84.99685 * 17 16 14 20 20 C 1.52997 * 109.46843 * 180.02562 * 19 17 16 21 21 C 1.53001 * 109.47050 * 300.00019 * 20 19 17 22 22 H 1.09008 * 109.47298 * 180.02562 * 21 20 19 23 23 O 1.42903 * 109.47171 * 299.99915 * 21 20 19 24 24 C 1.52999 * 109.47329 * 60.00237 * 21 20 19 25 25 C 1.52997 * 109.46862 * 299.99879 * 24 21 20 26 26 C 1.39577 * 119.77570 * 359.46635 * 13 12 11 27 27 C 1.38027 * 119.98322 * 0.27921 * 26 13 12 28 28 C 1.38220 * 120.21087 * 359.97386 * 27 26 13 29 29 H 1.09005 * 109.47438 * 270.17738 * 1 2 3 30 30 H 1.08999 * 109.47136 * 30.18172 * 1 2 3 31 31 H 1.09002 * 109.47054 * 150.17776 * 1 2 3 32 32 H 1.07988 * 126.26724 * 0.02798 * 3 2 1 33 33 H 1.08995 * 109.46585 * 134.97597 * 5 4 3 34 34 H 0.96703 * 114.00335 * 59.99497 * 6 5 4 35 35 H 1.48496 * 110.00007 * 180.02562 * 7 5 4 36 36 H 1.48511 * 109.99896 * 301.31915 * 7 5 4 37 37 H 1.09003 * 109.47354 * 269.99843 * 9 8 4 38 38 H 1.09005 * 109.47599 * 30.00131 * 9 8 4 39 39 H 1.09002 * 109.47117 * 150.00266 * 9 8 4 40 40 H 1.07998 * 120.11257 * 0.02562 * 12 11 10 41 41 H 0.96996 * 120.00472 * 359.97438 * 16 14 13 42 42 H 1.08997 * 109.47270 * 300.00197 * 19 17 16 43 43 H 1.08997 * 109.46854 * 60.00323 * 19 17 16 44 44 H 1.08999 * 109.46989 * 180.02562 * 20 19 17 45 45 H 1.08997 * 109.47549 * 60.00238 * 20 19 17 46 46 H 0.96700 * 114.00311 * 300.00378 * 23 21 20 47 47 H 1.08997 * 109.46819 * 60.00057 * 24 21 20 48 48 H 1.08997 * 109.47286 * 180.02562 * 24 21 20 49 49 H 1.09009 * 109.46962 * 179.97438 * 25 24 21 50 50 H 1.08997 * 109.47549 * 299.99731 * 25 24 21 51 51 H 1.08000 * 120.01106 * 180.30191 * 26 13 12 52 52 H 1.07993 * 119.89192 * 180.02562 * 27 26 13 53 53 H 1.08003 * 119.87866 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0924 0.0000 4 6 3.6348 0.6466 -0.0056 5 6 4.8648 1.5175 -0.0123 6 8 5.4493 1.5061 -1.3162 7 14 4.3932 3.2617 0.4416 8 6 3.6120 -0.7017 -0.0033 9 6 4.8177 -1.6058 -0.0081 10 7 2.3077 -1.1063 0.0028 11 6 1.8643 -2.4366 0.0063 12 6 1.1644 -2.9361 -1.0800 13 6 0.7207 -4.2587 -1.0697 14 6 -0.0318 -4.7977 -2.2228 15 8 -0.2692 -4.0866 -3.1795 16 7 -0.4546 -6.0774 -2.2128 17 6 -1.2007 -6.6113 -3.3549 18 1 -1.8340 -5.8288 -3.7731 19 6 -0.2189 -7.0978 -4.4230 20 6 -0.9981 -7.6548 -5.6160 21 6 -1.8703 -8.8241 -5.1544 22 1 -2.4252 -9.2212 -6.0045 23 8 -1.0404 -9.8503 -4.6066 24 6 -2.8520 -8.3376 -4.0865 25 6 -2.0728 -7.7806 -2.8934 26 6 0.9946 -5.0731 0.0302 27 6 1.6973 -4.5673 1.1051 28 6 2.1320 -3.2552 1.0965 29 1 -0.3634 0.0032 1.0277 30 1 -0.3633 0.8883 -0.5166 31 1 -0.3633 -0.8916 -0.5111 32 1 1.9670 2.1204 0.0004 33 1 5.5843 1.1355 0.7118 34 1 4.8639 1.8337 -2.0127 35 1 5.5973 4.1307 0.4379 36 1 3.3884 3.7827 -0.5199 37 1 5.1031 -1.8254 -1.0369 38 1 5.6450 -1.1110 0.5007 39 1 4.5771 -2.5350 0.5084 40 1 0.9597 -2.3027 -1.9305 41 1 -0.2649 -6.6449 -1.4494 42 1 0.4022 -6.2647 -4.7521 43 1 0.4144 -7.8802 -4.0049 44 1 -0.2988 -8.0018 -6.3767 45 1 -1.6312 -6.8721 -6.0340 46 1 -0.3921 -10.2063 -5.2295 47 1 -3.4851 -7.5550 -4.5044 48 1 -3.4731 -9.1707 -3.7573 49 1 -2.7722 -7.4336 -2.1327 50 1 -1.4397 -8.5633 -2.4754 51 1 0.6572 -6.0990 0.0400 52 1 1.9087 -5.1988 1.9552 53 1 2.6810 -2.8648 1.9407 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12335854.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:20 Heat of formation + Delta-G solvation = -45.910295 kcal Electronic energy + Delta-G solvation = -33874.341204 eV Core-core repulsion = 29484.758572 eV Total energy + Delta-G solvation = -4389.582632 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.193 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.93043 -41.53886 -40.15923 -39.23814 -37.83955 -36.75253 -34.80847 -34.02849 -33.75553 -32.38690 -31.86248 -30.67912 -30.17863 -29.51384 -27.25121 -25.42143 -24.76555 -23.85570 -23.70731 -23.08099 -21.85960 -21.17085 -20.91231 -20.26831 -18.82395 -17.89722 -17.64672 -17.57266 -17.40733 -17.35031 -16.74605 -16.54474 -16.18724 -15.99791 -15.63961 -15.59352 -15.36149 -15.05125 -14.98423 -14.70159 -14.44787 -14.35877 -14.15385 -14.09010 -14.05057 -13.75705 -13.50918 -13.48190 -13.30891 -13.25088 -13.22053 -13.07639 -12.93387 -12.68718 -12.51734 -12.43757 -12.18556 -12.08046 -11.71489 -11.65088 -11.32601 -11.22925 -10.72044 -10.52984 -10.43492 -10.32730 -10.09851 -9.55265 -8.86957 -4.85780 -0.45822 -0.07145 1.05915 1.41856 1.61277 1.62877 1.71709 1.75867 1.97712 2.03467 2.55995 3.36234 3.42230 3.54695 3.63825 3.65103 3.68780 3.71132 3.86218 3.91093 3.94841 3.96981 4.04032 4.09273 4.17156 4.19131 4.30583 4.35419 4.37473 4.40458 4.44701 4.48148 4.56588 4.60441 4.61555 4.66109 4.68848 4.73158 4.86156 4.93750 4.96814 4.97277 4.99855 5.02156 5.05142 5.10967 5.11543 5.12529 5.14934 5.22540 5.30010 5.32867 5.42656 5.53237 5.95052 6.11722 6.36378 6.43548 6.54716 6.88508 7.02550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.015 3.985 3 C -0.198 4.198 4 C -0.201 4.201 5 C -0.046 4.046 6 O -0.552 6.552 7 Si 0.776 3.224 8 C 0.040 3.960 9 C -0.082 4.082 10 N -0.405 5.405 11 C 0.098 3.902 12 C -0.068 4.068 13 C -0.134 4.134 14 C 0.557 3.443 15 O -0.580 6.580 16 N -0.705 5.705 17 C 0.147 3.853 18 H 0.068 0.932 19 C -0.120 4.120 20 C -0.148 4.148 21 C 0.105 3.895 22 H 0.066 0.934 23 O -0.577 6.577 24 C -0.113 4.113 25 C -0.114 4.114 26 C -0.066 4.066 27 C -0.098 4.098 28 C -0.083 4.083 29 H 0.085 0.915 30 H 0.090 0.910 31 H 0.054 0.946 32 H 0.151 0.849 33 H 0.118 0.882 34 H 0.381 0.619 35 H -0.304 1.304 36 H -0.290 1.290 37 H 0.063 0.937 38 H 0.091 0.909 39 H 0.074 0.926 40 H 0.113 0.887 41 H 0.415 0.585 42 H 0.040 0.960 43 H 0.075 0.925 44 H 0.077 0.923 45 H 0.070 0.930 46 H 0.390 0.610 47 H 0.083 0.917 48 H 0.079 0.921 49 H 0.077 0.923 50 H 0.080 0.920 51 H 0.167 0.833 52 H 0.177 0.823 53 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.483 -7.137 5.220 9.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.094 4.094 3 C -0.222 4.222 4 C -0.208 4.208 5 C -0.156 4.156 6 O -0.360 6.360 7 Si 0.682 3.318 8 C -0.070 4.070 9 C -0.139 4.139 10 N -0.080 5.080 11 C 0.009 3.991 12 C -0.088 4.088 13 C -0.137 4.137 14 C 0.345 3.655 15 O -0.461 6.461 16 N -0.356 5.356 17 C 0.043 3.957 18 H 0.086 0.914 19 C -0.158 4.158 20 C -0.186 4.186 21 C 0.046 3.954 22 H 0.084 0.916 23 O -0.385 6.385 24 C -0.151 4.151 25 C -0.152 4.152 26 C -0.085 4.085 27 C -0.116 4.116 28 C -0.102 4.102 29 H 0.103 0.897 30 H 0.109 0.891 31 H 0.073 0.927 32 H 0.168 0.832 33 H 0.136 0.864 34 H 0.230 0.770 35 H -0.232 1.232 36 H -0.217 1.217 37 H 0.081 0.919 38 H 0.109 0.891 39 H 0.093 0.907 40 H 0.131 0.869 41 H 0.254 0.746 42 H 0.059 0.941 43 H 0.094 0.906 44 H 0.095 0.905 45 H 0.089 0.911 46 H 0.240 0.760 47 H 0.101 0.899 48 H 0.097 0.903 49 H 0.095 0.905 50 H 0.099 0.901 51 H 0.184 0.816 52 H 0.195 0.805 53 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -2.665 -6.262 5.153 8.536 hybrid contribution 0.410 -0.039 -1.982 2.024 sum -2.255 -6.301 3.171 7.405 Atomic orbital electron populations 1.20390 0.86928 1.03341 1.03547 1.20744 0.94334 0.85083 1.09192 1.20791 0.92060 0.98154 1.11207 1.19682 0.95008 0.92809 1.13253 1.24478 0.94631 1.09412 0.87042 1.86530 1.44612 1.87266 1.17558 0.93889 0.76871 0.71935 0.89122 1.20579 0.84344 0.94420 1.07610 1.20357 0.93085 0.97832 1.02640 1.41500 1.05666 1.03249 1.57604 1.17664 1.01896 0.83788 0.95752 1.21095 0.96132 0.94997 0.96588 1.19741 1.03237 0.94493 0.96261 1.18471 0.78605 0.82202 0.86198 1.90784 1.58469 1.59662 1.37150 1.45865 1.56298 1.11294 1.22132 1.21033 0.92723 0.95909 0.86084 0.91413 1.21743 0.98147 0.99996 0.95945 1.22208 0.99767 0.99055 0.97589 1.21797 0.90953 0.86906 0.95761 0.91591 1.86461 1.52673 1.55194 1.44213 1.21555 0.97105 1.01223 0.95252 1.21647 0.98597 0.96277 0.98647 1.21792 0.95062 1.00478 0.91150 1.21468 0.96290 0.94390 0.99501 1.21677 0.97987 0.94400 0.96125 0.89673 0.89130 0.92656 0.83170 0.86446 0.77040 1.23193 1.21708 0.91854 0.89050 0.90711 0.86889 0.74646 0.94069 0.90605 0.90483 0.91115 0.76032 0.89853 0.90254 0.90462 0.90113 0.81598 0.80544 0.83390 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.17 10.08 71.23 0.72 0.55 16 2 C 0.01 0.09 6.81 41.04 0.28 0.36 16 3 C -0.20 -1.09 9.27 22.16 0.21 -0.88 16 4 C -0.20 -1.13 5.36 -19.98 -0.11 -1.24 16 5 C -0.05 -0.18 2.60 71.24 0.19 0.01 16 6 O -0.55 -3.91 12.88 -148.98 -1.92 -5.83 16 7 Si 0.78 1.71 30.86 68.60 2.12 3.83 16 8 C 0.04 0.23 6.81 41.04 0.28 0.51 16 9 C -0.08 -0.16 9.87 71.24 0.70 0.54 16 10 N -0.41 -2.29 2.79 -320.38 -0.89 -3.19 16 11 C 0.10 0.31 5.01 38.04 0.19 0.50 16 12 C -0.07 -0.39 8.32 22.65 0.19 -0.20 16 13 C -0.13 -0.26 5.87 -20.10 -0.12 -0.38 16 14 C 0.56 3.23 7.74 86.79 0.67 3.90 16 15 O -0.58 -8.78 16.01 -3.87 -0.06 -8.84 16 16 N -0.70 0.64 5.03 -445.38 -2.24 -1.60 16 17 C 0.15 0.05 2.45 44.99 0.11 0.16 16 18 H 0.07 0.34 7.58 -2.38 -0.02 0.32 16 19 C -0.12 -0.11 5.35 30.60 0.16 0.06 16 20 C -0.15 0.30 5.64 30.59 0.17 0.47 16 21 C 0.10 -0.35 3.77 30.59 0.12 -0.23 16 22 H 0.07 -0.31 8.14 -2.38 -0.02 -0.33 16 23 O -0.58 1.40 11.97 -148.98 -1.78 -0.38 16 24 C -0.11 0.39 5.66 30.59 0.17 0.56 16 25 C -0.11 0.40 5.25 30.59 0.16 0.56 16 26 C -0.07 0.40 9.54 22.54 0.22 0.61 16 27 C -0.10 0.73 10.03 22.22 0.22 0.95 16 28 C -0.08 0.23 8.77 22.43 0.20 0.43 16 29 H 0.08 -0.05 8.14 -2.38 -0.02 -0.07 16 30 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 31 H 0.05 0.21 6.84 -2.39 -0.02 0.20 16 32 H 0.15 0.44 6.52 -2.92 -0.02 0.42 16 33 H 0.12 0.17 7.50 -2.39 -0.02 0.16 16 34 H 0.38 1.09 8.70 -74.06 -0.64 0.45 16 35 H -0.30 -2.71 7.11 99.48 0.71 -2.00 16 36 H -0.29 -1.96 7.01 99.48 0.70 -1.26 16 37 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 38 H 0.09 0.01 7.50 -2.38 -0.02 -0.01 16 39 H 0.07 -0.07 6.85 -2.39 -0.02 -0.09 16 40 H 0.11 1.24 7.65 -2.91 -0.02 1.22 16 41 H 0.42 -3.16 6.63 -92.71 -0.61 -3.77 16 42 H 0.04 0.26 8.14 -2.39 -0.02 0.24 16 43 H 0.08 0.00 7.68 -2.39 -0.02 -0.02 16 44 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 45 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 46 H 0.39 -3.40 9.08 -74.06 -0.67 -4.07 16 47 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 48 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 49 H 0.08 -0.37 8.14 -2.38 -0.02 -0.39 16 50 H 0.08 -0.27 7.68 -2.39 -0.02 -0.29 16 51 H 0.17 -2.16 6.40 -2.91 -0.02 -2.17 16 52 H 0.18 -2.49 8.06 -2.91 -0.02 -2.51 16 53 H 0.15 -0.76 8.06 -2.91 -0.02 -0.78 16 Total: 0.00 -23.38 422.00 -1.01 -24.39 By element: Atomic # 1 Polarization: -14.68 SS G_CDS: -0.95 Total: -15.63 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: 4.73 Total: 7.25 kcal Atomic # 7 Polarization: -1.66 SS G_CDS: -3.13 Total: -4.79 kcal Atomic # 8 Polarization: -11.28 SS G_CDS: -3.76 Total: -15.05 kcal Atomic # 14 Polarization: 1.71 SS G_CDS: 2.12 Total: 3.83 kcal Total: -23.38 -1.01 -24.39 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12335854.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.524 kcal (2) G-P(sol) polarization free energy of solvation -23.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.387 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.910 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds