Wall clock time and date at job start Sat Mar 6 2021 23:53:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.34803 * 125.89784 * 2 1 4 4 C 1.40996 * 107.48450 * 180.02562 * 3 2 1 5 5 C 1.50693 * 126.25620 * 180.02562 * 4 3 2 6 6 O 1.42907 * 109.47661 * 105.02123 * 5 4 3 7 7 Si 1.86298 * 109.47618 * 345.01813 * 5 4 3 8 8 C 1.34809 * 107.48438 * 0.25385 * 4 3 2 9 9 C 1.50698 * 125.90223 * 179.73915 * 8 4 3 10 10 N 1.36647 * 125.90678 * 180.02562 * 2 1 3 11 11 C 1.39669 * 125.67999 * 0.02562 * 10 2 1 12 12 C 1.40204 * 120.15534 * 269.70146 * 11 10 2 13 13 C 1.47572 * 120.19185 * 0.02562 * 12 11 10 14 14 O 1.21587 * 120.00101 * 0.02562 * 13 12 11 15 15 N 1.34779 * 120.00050 * 180.02562 * 13 12 11 16 16 C 1.46499 * 119.99736 * 179.97438 * 15 13 12 17 17 H 1.09001 * 109.47321 * 35.00159 * 16 15 13 18 18 C 1.53007 * 109.46754 * 155.00048 * 16 15 13 19 19 C 1.53002 * 109.47129 * 59.99780 * 18 16 15 20 20 C 1.52995 * 109.46894 * 60.00144 * 19 18 16 21 21 H 1.09003 * 109.47525 * 60.00163 * 20 19 18 22 22 O 1.42907 * 109.47106 * 179.97438 * 20 19 18 23 23 C 1.52996 * 109.47400 * 299.99739 * 20 19 18 24 24 C 1.52992 * 109.47245 * 274.99594 * 16 15 13 25 25 C 1.39654 * 119.61233 * 179.76976 * 12 11 10 26 26 C 1.37829 * 119.91937 * 0.50567 * 25 12 11 27 27 C 1.38525 * 120.31072 * 359.74414 * 26 25 12 28 28 C 1.38077 * 120.39525 * 359.97438 * 27 26 25 29 29 H 1.08994 * 109.47129 * 89.97908 * 1 2 3 30 30 H 1.09005 * 109.46674 * 209.97844 * 1 2 3 31 31 H 1.09002 * 109.47182 * 329.97578 * 1 2 3 32 32 H 1.08007 * 126.26136 * 0.03637 * 3 2 1 33 33 H 1.09000 * 109.46936 * 225.01746 * 5 4 3 34 34 H 0.96697 * 114.00527 * 179.97438 * 6 5 4 35 35 H 1.48506 * 109.99834 * 298.68714 * 7 5 4 36 36 H 1.48502 * 110.00011 * 59.99978 * 7 5 4 37 37 H 1.08997 * 109.47076 * 90.02769 * 9 8 4 38 38 H 1.08999 * 109.47171 * 210.03339 * 9 8 4 39 39 H 1.09003 * 109.46876 * 330.02924 * 9 8 4 40 40 H 0.96993 * 119.99483 * 359.97438 * 15 13 12 41 41 H 1.08998 * 109.47317 * 180.02562 * 18 16 15 42 42 H 1.09004 * 109.47110 * 299.99838 * 18 16 15 43 43 H 1.08998 * 109.46478 * 180.02562 * 19 18 16 44 44 H 1.08995 * 109.47169 * 299.99973 * 19 18 16 45 45 H 0.96699 * 113.99881 * 179.97438 * 22 20 19 46 46 H 1.08998 * 109.47759 * 180.02562 * 23 20 19 47 47 H 1.09003 * 109.47127 * 300.00668 * 23 20 19 48 48 H 1.08999 * 109.47049 * 60.00739 * 24 16 15 49 49 H 1.09003 * 109.47413 * 180.02562 * 24 16 15 50 50 H 1.08004 * 120.04131 * 180.26601 * 25 12 11 51 51 H 1.08003 * 119.84572 * 179.72732 * 26 25 12 52 52 H 1.08002 * 119.80510 * 180.02562 * 27 26 25 53 53 H 1.07994 * 119.96794 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2974 1.0920 0.0000 4 6 3.6352 0.6466 -0.0006 5 6 4.8646 1.5181 -0.0003 6 8 5.4556 1.5078 1.3008 7 14 4.3901 3.2618 -0.4530 8 6 3.6134 -0.7013 -0.0066 9 6 4.8195 -1.6046 -0.0150 10 7 2.3084 -1.1068 -0.0005 11 6 1.8673 -2.4320 -0.0016 12 6 1.6503 -3.1031 1.2101 13 6 1.8863 -2.4132 2.4932 14 8 2.2695 -1.2593 2.5015 15 7 1.6770 -3.0622 3.6557 16 6 1.9118 -2.3774 4.9294 17 1 1.6395 -1.3265 4.8325 18 6 1.0597 -3.0265 6.0219 19 6 1.4419 -4.5017 6.1579 20 6 2.9213 -4.6129 6.5316 21 1 3.0960 -4.1035 7.4793 22 8 3.2782 -5.9908 6.6592 23 6 3.7735 -3.9639 5.4391 24 6 3.3912 -2.4887 5.3031 25 6 1.2046 -4.4265 1.1958 26 6 0.9909 -5.0670 -0.0058 27 6 1.2113 -4.4025 -1.2011 28 6 1.6465 -3.0921 -1.2020 29 1 -0.3633 0.0004 -1.0276 30 1 -0.3633 -0.8902 0.5135 31 1 -0.3634 0.8898 0.5142 32 1 1.9665 2.1201 0.0006 33 1 5.5810 1.1360 -0.7276 34 1 6.2537 2.0488 1.3747 35 1 3.8035 3.2906 -1.8170 36 1 3.4137 3.7942 0.5311 37 1 5.1137 -1.8275 1.0106 38 1 4.5752 -2.5322 -0.5327 39 1 5.6422 -1.1075 -0.5290 40 1 1.3710 -3.9826 3.6490 41 1 1.2340 -2.5168 6.9695 42 1 0.0056 -2.9473 5.7557 43 1 0.8345 -4.9641 6.9359 44 1 1.2672 -5.0111 5.2103 45 1 4.2046 -6.1369 6.8949 46 1 4.8275 -4.0435 5.7051 47 1 3.5988 -4.4733 4.4914 48 1 3.9983 -2.0263 4.5248 49 1 3.5659 -1.9796 6.2509 50 1 1.0311 -4.9487 2.1252 51 1 0.6504 -6.0919 -0.0154 52 1 1.0409 -4.9122 -2.1379 53 1 1.8165 -2.5808 -2.1379 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12335856.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:24 Heat of formation + Delta-G solvation = -32.307966 kcal Electronic energy + Delta-G solvation = -36192.885014 eV Core-core repulsion = 31803.892223 eV Total energy + Delta-G solvation = -4388.992791 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.193 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -42.98645 -41.47090 -40.11361 -39.08957 -37.63832 -37.01885 -34.60442 -34.12150 -33.73854 -32.36580 -31.96640 -30.58827 -30.24431 -29.67157 -27.29237 -25.35448 -24.67580 -23.85150 -23.70911 -23.16129 -22.17307 -21.12442 -20.32656 -20.04226 -19.08064 -18.29518 -18.25146 -17.91035 -17.34784 -16.83124 -16.52159 -16.42013 -16.03751 -15.87502 -15.63369 -15.39706 -15.32831 -15.14519 -14.86001 -14.76845 -14.58647 -14.32119 -14.25094 -14.14327 -13.99180 -13.85371 -13.71890 -13.51413 -13.35857 -13.28412 -13.18550 -13.01408 -12.89329 -12.65567 -12.52231 -12.35756 -12.30362 -12.24452 -11.93107 -11.83425 -11.27566 -11.06300 -10.82471 -10.34753 -10.23218 -10.13686 -10.04783 -9.68639 -8.82353 -4.96855 -0.47700 -0.02663 1.06610 1.38846 1.61536 1.71766 1.77225 1.81696 1.98436 2.10367 2.55076 3.18118 3.44934 3.55136 3.60360 3.63097 3.65295 3.79577 3.90479 3.94257 3.96248 3.97474 4.11686 4.12430 4.13251 4.16522 4.17772 4.26270 4.28578 4.34853 4.38140 4.42409 4.47738 4.51540 4.53060 4.54708 4.61341 4.64028 4.78980 4.81931 4.87310 4.90785 4.96323 5.00559 5.02044 5.05819 5.08186 5.12829 5.20029 5.22401 5.23846 5.27577 5.41169 5.57629 5.93628 6.10490 6.37222 6.51612 6.81417 7.02646 7.10297 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.037 3.963 3 C -0.225 4.225 4 C -0.181 4.181 5 C -0.041 4.041 6 O -0.567 6.567 7 Si 0.790 3.210 8 C 0.060 3.940 9 C -0.071 4.071 10 N -0.388 5.388 11 C 0.140 3.860 12 C -0.143 4.143 13 C 0.542 3.458 14 O -0.545 6.545 15 N -0.706 5.706 16 C 0.148 3.852 17 H 0.067 0.933 18 C -0.115 4.115 19 C -0.112 4.112 20 C 0.105 3.895 21 H 0.064 0.936 22 O -0.585 6.585 23 C -0.140 4.140 24 C -0.123 4.123 25 C -0.076 4.076 26 C -0.103 4.103 27 C -0.074 4.074 28 C -0.121 4.121 29 H 0.085 0.915 30 H 0.059 0.941 31 H 0.078 0.922 32 H 0.120 0.880 33 H 0.081 0.919 34 H 0.395 0.605 35 H -0.296 1.296 36 H -0.311 1.311 37 H 0.057 0.943 38 H 0.067 0.933 39 H 0.092 0.908 40 H 0.408 0.592 41 H 0.093 0.907 42 H 0.084 0.916 43 H 0.079 0.921 44 H 0.069 0.931 45 H 0.393 0.607 46 H 0.070 0.930 47 H 0.061 0.939 48 H 0.042 0.958 49 H 0.083 0.917 50 H 0.156 0.844 51 H 0.172 0.828 52 H 0.167 0.833 53 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.654 -6.578 -0.408 6.623 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.072 4.072 3 C -0.249 4.249 4 C -0.187 4.187 5 C -0.151 4.151 6 O -0.376 6.376 7 Si 0.698 3.302 8 C -0.051 4.051 9 C -0.128 4.128 10 N -0.062 5.062 11 C 0.050 3.950 12 C -0.147 4.147 13 C 0.329 3.671 14 O -0.423 6.423 15 N -0.360 5.360 16 C 0.043 3.957 17 H 0.085 0.915 18 C -0.153 4.153 19 C -0.150 4.150 20 C 0.047 3.953 21 H 0.082 0.918 22 O -0.393 6.393 23 C -0.178 4.178 24 C -0.161 4.161 25 C -0.095 4.095 26 C -0.121 4.121 27 C -0.093 4.093 28 C -0.140 4.140 29 H 0.103 0.897 30 H 0.078 0.922 31 H 0.097 0.903 32 H 0.138 0.862 33 H 0.099 0.901 34 H 0.244 0.756 35 H -0.223 1.223 36 H -0.240 1.240 37 H 0.076 0.924 38 H 0.086 0.914 39 H 0.111 0.889 40 H 0.247 0.753 41 H 0.112 0.888 42 H 0.103 0.897 43 H 0.097 0.903 44 H 0.087 0.913 45 H 0.243 0.757 46 H 0.089 0.911 47 H 0.079 0.921 48 H 0.061 0.939 49 H 0.102 0.898 50 H 0.174 0.826 51 H 0.189 0.811 52 H 0.185 0.815 53 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -0.935 -6.007 -0.620 6.111 hybrid contribution 0.237 -0.260 0.262 0.439 sum -0.698 -6.267 -0.358 6.316 Atomic orbital electron populations 1.20277 0.86962 1.02941 1.03145 1.20419 0.94020 0.84936 1.07850 1.20450 0.93402 0.96993 1.14043 1.18799 0.93698 0.92619 1.13580 1.24141 0.94060 1.08739 0.88139 1.86542 1.46894 1.74094 1.30072 0.95182 0.84337 0.75835 0.74844 1.20334 0.84552 0.93771 1.06396 1.20217 0.93169 0.97401 1.02009 1.40973 1.05205 1.02988 1.57041 1.17842 1.00373 0.83173 0.93614 1.20258 1.06052 0.96400 0.92038 1.18474 0.77857 0.86158 0.84630 1.90949 1.45688 1.17921 1.87727 1.45917 1.68390 1.17002 1.04732 1.20933 0.95265 0.96717 0.82751 0.91518 1.21760 0.99927 0.95143 0.98499 1.21473 0.94539 0.96180 1.02793 1.21833 0.94779 0.81694 0.97018 0.91819 1.86466 1.34195 1.25367 1.93268 1.22144 1.00368 0.95267 1.00022 1.21783 0.95662 0.96867 1.01835 1.21585 0.95718 0.91344 1.00892 1.21703 0.97483 1.01960 0.90940 1.21701 0.94397 0.92479 1.00686 1.21481 0.99910 0.96294 0.96292 0.89652 0.92217 0.90280 0.86236 0.90119 0.75561 1.22335 1.23975 0.92392 0.91411 0.88906 0.75344 0.88827 0.89740 0.90254 0.91274 0.75723 0.91101 0.92055 0.93939 0.89815 0.82643 0.81099 0.81504 0.84584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.62 10.09 71.24 0.72 0.10 16 2 C 0.04 0.54 6.02 41.02 0.25 0.78 16 3 C -0.22 -3.91 9.27 22.16 0.21 -3.71 16 4 C -0.18 -2.83 5.39 -19.98 -0.11 -2.94 16 5 C -0.04 -0.36 2.59 71.23 0.18 -0.18 16 6 O -0.57 -5.26 12.86 -148.98 -1.92 -7.18 16 7 Si 0.79 5.02 30.84 68.60 2.12 7.13 16 8 C 0.06 0.83 6.01 41.02 0.25 1.07 16 9 C -0.07 -0.58 9.87 71.24 0.70 0.12 16 10 N -0.39 -4.79 1.43 -319.54 -0.46 -5.24 16 11 C 0.14 0.94 4.52 38.50 0.17 1.11 16 12 C -0.14 -0.64 5.89 -19.99 -0.12 -0.76 16 13 C 0.54 4.65 7.73 86.71 0.67 5.32 16 14 O -0.55 -9.75 13.37 -3.99 -0.05 -9.80 16 15 N -0.71 -1.16 4.18 -445.66 -1.86 -3.02 16 16 C 0.15 0.28 2.78 44.99 0.13 0.41 16 17 H 0.07 0.50 7.58 -2.39 -0.02 0.49 16 18 C -0.12 0.42 5.61 30.60 0.17 0.59 16 19 C -0.11 0.40 5.40 30.59 0.17 0.57 16 20 C 0.11 -0.25 3.47 30.59 0.11 -0.14 16 21 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 22 O -0.58 0.31 13.32 -148.98 -1.98 -1.67 16 23 C -0.14 0.14 5.39 30.59 0.16 0.31 16 24 C -0.12 -0.28 5.60 30.59 0.17 -0.11 16 25 C -0.08 0.27 9.53 22.52 0.21 0.49 16 26 C -0.10 0.72 10.02 22.24 0.22 0.95 16 27 C -0.07 0.40 10.03 22.30 0.22 0.62 16 28 C -0.12 -0.11 9.96 22.36 0.22 0.11 16 29 H 0.08 0.38 8.14 -2.39 -0.02 0.36 16 30 H 0.06 0.47 7.83 -2.38 -0.02 0.45 16 31 H 0.08 0.61 8.14 -2.39 -0.02 0.59 16 32 H 0.12 2.11 6.55 -2.91 -0.02 2.09 16 33 H 0.08 0.31 7.49 -2.39 -0.02 0.30 16 34 H 0.39 -1.02 8.74 -74.06 -0.65 -1.67 16 35 H -0.30 -3.47 7.11 99.48 0.71 -2.76 16 36 H -0.31 -4.74 7.06 99.48 0.70 -4.03 16 37 H 0.06 0.62 8.14 -2.39 -0.02 0.60 16 38 H 0.07 0.37 7.84 -2.39 -0.02 0.35 16 39 H 0.09 0.45 7.49 -2.39 -0.02 0.43 16 40 H 0.41 -1.48 4.90 -92.71 -0.45 -1.93 16 41 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 42 H 0.08 -0.38 8.14 -2.38 -0.02 -0.40 16 43 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 44 H 0.07 -0.30 6.51 -2.39 -0.02 -0.32 16 45 H 0.39 -2.88 9.08 -74.06 -0.67 -3.56 16 46 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 47 H 0.06 0.04 7.60 -2.39 -0.02 0.03 16 48 H 0.04 0.38 8.14 -2.39 -0.02 0.36 16 49 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 50 H 0.16 -1.40 6.40 -2.91 -0.02 -1.41 16 51 H 0.17 -2.27 8.06 -2.91 -0.02 -2.29 16 52 H 0.17 -1.86 8.06 -2.91 -0.02 -1.88 16 53 H 0.14 0.05 8.06 -2.91 -0.02 0.03 16 Total: 0.00 -30.17 418.95 -0.24 -30.41 By element: Atomic # 1 Polarization: -14.55 SS G_CDS: -0.79 Total: -15.34 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: 4.71 Total: 4.71 kcal Atomic # 7 Polarization: -5.94 SS G_CDS: -2.32 Total: -8.26 kcal Atomic # 8 Polarization: -14.70 SS G_CDS: -3.95 Total: -18.65 kcal Atomic # 14 Polarization: 5.02 SS G_CDS: 2.12 Total: 7.13 kcal Total: -30.17 -0.24 -30.41 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12335856.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.895 kcal (2) G-P(sol) polarization free energy of solvation -30.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.413 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds