Wall clock time and date at job start Sat Mar 6 2021 23:53:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86293 * 109.47324 * 2 1 4 4 C 1.50702 * 109.47131 * 239.99761 * 2 1 3 5 5 C 1.38321 * 119.91942 * 119.98330 * 4 2 1 6 6 C 1.38472 * 120.28268 * 180.02562 * 5 4 2 7 7 Br 1.89097 * 119.93874 * 180.02562 * 6 5 4 8 8 C 1.38029 * 120.12116 * 359.71519 * 6 5 4 9 9 C 1.39587 * 119.84548 * 0.55765 * 8 6 5 10 10 C 1.47845 * 120.14387 * 179.71637 * 9 8 6 11 11 O 1.21549 * 120.00139 * 179.72731 * 10 9 8 12 12 N 1.34779 * 119.99652 * 359.72893 * 10 9 8 13 13 C 1.46500 * 119.99793 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.47092 * 34.99824 * 13 12 10 15 15 C 1.52997 * 109.47007 * 154.99772 * 13 12 10 16 16 C 1.53006 * 109.47127 * 60.00219 * 15 13 12 17 17 C 1.52997 * 109.47164 * 59.99836 * 16 15 13 18 18 H 1.09001 * 109.47375 * 59.99966 * 17 16 15 19 19 O 1.42905 * 109.46921 * 179.97438 * 17 16 15 20 20 C 1.53002 * 109.46978 * 299.99874 * 17 16 15 21 21 C 1.52996 * 109.46891 * 60.00410 * 20 17 16 22 22 C 1.37982 * 119.92188 * 300.00103 * 4 2 1 23 23 H 0.96707 * 113.99401 * 60.00133 * 1 2 3 24 24 H 1.08998 * 109.46690 * 119.99957 * 2 1 3 25 25 H 1.48502 * 110.00079 * 59.99565 * 3 2 1 26 26 H 1.48498 * 110.00126 * 181.31469 * 3 2 1 27 27 H 1.07996 * 119.86174 * 359.97438 * 5 4 2 28 28 H 1.08004 * 120.07974 * 180.29669 * 8 6 5 29 29 H 0.97004 * 119.99983 * 359.97438 * 12 10 9 30 30 H 1.08998 * 109.47533 * 179.97438 * 15 13 12 31 31 H 1.08996 * 109.47853 * 300.00060 * 15 13 12 32 32 H 1.09000 * 109.47050 * 179.97438 * 16 15 13 33 33 H 1.09001 * 109.47002 * 299.99574 * 16 15 13 34 34 H 0.96697 * 113.99519 * 179.97438 * 19 17 16 35 35 H 1.09004 * 109.47006 * 180.02562 * 20 17 16 36 36 H 1.08992 * 109.47056 * 300.00064 * 20 17 16 37 37 H 1.09004 * 109.47368 * 179.97438 * 21 20 17 38 38 H 1.09001 * 109.47372 * 59.99964 * 21 20 17 39 39 H 1.08003 * 120.06818 * 359.95395 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7262 -0.0366 -2.1400 6 6 3.1914 -0.6819 -3.2734 7 35 4.2780 0.2485 -4.5101 8 6 2.8688 -2.0049 -3.4989 9 6 2.0623 -2.6883 -2.5873 10 6 1.7075 -4.1037 -2.8254 11 8 1.0092 -4.6977 -2.0274 12 7 2.1585 -4.7352 -3.9274 13 6 1.8074 -6.1378 -4.1631 14 1 0.7971 -6.3255 -3.7995 15 6 1.8732 -6.4349 -5.6625 16 6 3.2913 -6.1715 -6.1730 17 6 4.2769 -7.0757 -5.4301 18 1 4.0157 -8.1193 -5.6055 19 8 5.6013 -6.8300 -5.9073 20 6 4.2111 -6.7785 -3.9307 21 6 2.7931 -7.0420 -3.4203 22 6 1.5970 -2.0315 -1.4472 23 1 -0.3932 0.4417 -0.7651 24 1 1.7922 -0.5138 0.8900 25 1 1.5615 2.4679 1.2085 26 1 3.5346 1.7702 -0.0320 27 1 2.9843 0.9975 -1.9660 28 1 3.2360 -2.5089 -4.3806 29 1 2.7156 -4.2609 -4.5644 30 1 1.6124 -7.4786 -5.8380 31 1 1.1710 -5.7908 -6.1918 32 1 3.3383 -6.3836 -7.2411 33 1 3.5525 -5.1278 -5.9976 34 1 6.2800 -7.3696 -5.4792 35 1 4.9137 -7.4224 -3.4015 36 1 4.4724 -5.7350 -3.7554 37 1 2.7463 -6.8307 -2.3520 38 1 2.5319 -8.0856 -3.5957 39 1 0.9767 -2.5564 -0.7357 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:34 Heat of formation + Delta-G solvation = -90.967335 kcal Electronic energy + Delta-G solvation = -23882.498998 eV Core-core repulsion = 20223.399352 eV Total energy + Delta-G solvation = -3659.099646 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.046 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.79131 -40.63560 -39.33369 -37.73588 -37.04890 -34.39748 -33.64525 -32.88920 -32.03423 -30.50648 -29.85553 -27.07775 -25.50011 -23.92471 -23.27551 -22.83191 -21.84660 -20.32863 -19.30605 -18.33617 -17.98968 -17.69021 -17.24164 -16.78730 -16.49341 -16.33409 -15.98503 -15.70352 -15.46820 -15.02576 -14.92045 -14.78980 -14.37399 -14.19271 -14.09603 -14.00896 -13.42824 -13.33822 -13.04439 -12.95330 -12.35756 -12.32811 -12.21605 -12.00222 -11.96231 -11.85684 -11.49465 -11.35273 -11.08548 -10.87426 -10.64251 -10.32849 -10.12545 -9.95080 -5.16140 -0.53411 -0.20879 0.37637 1.12560 1.49705 1.58257 1.85498 1.97806 2.48344 3.05427 3.18819 3.28546 3.39860 3.52526 3.55849 3.73394 3.79783 3.89357 3.92771 3.93020 4.05048 4.18171 4.19135 4.23996 4.26344 4.37064 4.43197 4.47046 4.68726 4.70629 4.85458 4.89526 4.91922 4.93864 4.98188 5.05145 5.10564 5.19085 5.32779 5.41030 6.33484 6.44091 6.60242 7.07471 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.067 4.067 3 Si 0.684 3.316 4 C -0.119 4.119 5 C -0.065 4.065 6 C -0.094 4.094 7 Br -0.032 7.032 8 C -0.054 4.054 9 C -0.128 4.128 10 C 0.562 3.438 11 O -0.527 6.527 12 N -0.719 5.719 13 C 0.144 3.856 14 H 0.096 0.904 15 C -0.126 4.126 16 C -0.115 4.115 17 C 0.103 3.897 18 H 0.058 0.942 19 O -0.568 6.568 20 C -0.151 4.151 21 C -0.130 4.130 22 C -0.018 4.018 23 H 0.381 0.619 24 H 0.121 0.879 25 H -0.248 1.248 26 H -0.253 1.253 27 H 0.142 0.858 28 H 0.137 0.863 29 H 0.399 0.601 30 H 0.085 0.915 31 H 0.079 0.921 32 H 0.077 0.923 33 H 0.066 0.934 34 H 0.380 0.620 35 H 0.067 0.933 36 H 0.070 0.930 37 H 0.073 0.927 38 H 0.077 0.923 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.605 0.391 -3.305 3.382 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.178 4.178 3 Si 0.585 3.415 4 C -0.121 4.121 5 C -0.084 4.084 6 C -0.173 4.173 7 Br 0.054 6.946 8 C -0.075 4.075 9 C -0.132 4.132 10 C 0.348 3.652 11 O -0.403 6.403 12 N -0.372 5.372 13 C 0.040 3.960 14 H 0.114 0.886 15 C -0.164 4.164 16 C -0.153 4.153 17 C 0.044 3.956 18 H 0.076 0.924 19 O -0.374 6.374 20 C -0.189 4.189 21 C -0.168 4.168 22 C -0.037 4.037 23 H 0.228 0.772 24 H 0.138 0.862 25 H -0.173 1.173 26 H -0.178 1.178 27 H 0.159 0.841 28 H 0.155 0.845 29 H 0.236 0.764 30 H 0.104 0.896 31 H 0.098 0.902 32 H 0.096 0.904 33 H 0.085 0.915 34 H 0.227 0.773 35 H 0.085 0.915 36 H 0.088 0.912 37 H 0.092 0.908 38 H 0.095 0.905 39 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.761 1.007 -2.609 2.898 hybrid contribution 0.567 -1.018 0.445 1.247 sum 1.327 -0.011 -2.164 2.539 Atomic orbital electron populations 1.86549 1.16549 1.81634 1.49277 1.25080 0.85660 1.10152 0.96885 0.94811 0.81258 0.77616 0.87811 1.20382 0.99239 0.94920 0.97526 1.21221 0.95364 0.99829 0.92011 1.21650 1.02886 0.95628 0.97165 1.96851 1.65731 1.75367 1.56673 1.21284 0.95184 0.92564 0.98444 1.19985 1.01698 0.94377 0.97127 1.18102 0.79740 0.85813 0.81503 1.90820 1.37321 1.67181 1.45020 1.46060 1.53625 1.13066 1.24440 1.21038 0.99827 0.79880 0.95294 0.88607 1.21834 0.96803 1.03615 0.94175 1.21488 0.93182 0.99812 1.00786 1.21835 0.83066 0.98385 0.92291 0.92437 1.86512 1.16780 1.67592 1.66539 1.22251 0.97542 1.02880 0.96250 1.21891 0.94149 0.99888 1.00911 1.21294 0.94445 0.92886 0.95048 0.77176 0.86196 1.17256 1.17786 0.84100 0.84510 0.76370 0.89609 0.90186 0.90421 0.91540 0.77277 0.91472 0.91172 0.90796 0.90468 0.83373 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.19 12.76 -35.23 -0.45 -0.26 16 2 C -0.07 0.06 2.82 36.01 0.10 0.16 16 3 Si 0.68 -1.18 29.78 -169.99 -5.06 -6.24 16 4 C -0.12 0.06 5.38 -104.68 -0.56 -0.50 16 5 C -0.06 0.06 8.41 -39.46 -0.33 -0.27 16 6 C -0.09 0.05 6.22 -39.57 -0.25 -0.19 16 7 Br -0.03 0.02 33.69 -68.01 -2.29 -2.28 16 8 C -0.05 0.05 9.28 -39.16 -0.36 -0.32 16 9 C -0.13 -0.07 5.87 -104.97 -0.62 -0.69 16 10 C 0.56 0.99 7.74 -12.33 -0.10 0.89 16 11 O -0.53 -2.78 16.01 5.32 0.09 -2.70 16 12 N -0.72 0.59 4.18 -54.75 -0.23 0.36 16 13 C 0.14 -0.16 2.78 -67.93 -0.19 -0.35 16 14 H 0.10 0.03 7.58 -51.93 -0.39 -0.37 16 15 C -0.13 0.35 5.61 -26.73 -0.15 0.20 16 16 C -0.12 0.22 5.40 -26.73 -0.14 0.08 16 17 C 0.10 -0.15 3.47 -26.73 -0.09 -0.24 16 18 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 19 O -0.57 0.05 13.32 -35.23 -0.47 -0.42 16 20 C -0.15 0.22 5.39 -26.73 -0.14 0.07 16 21 C -0.13 0.13 5.60 -26.73 -0.15 -0.02 16 22 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 23 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 24 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 25 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 26 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 27 H 0.14 -0.34 4.86 -52.49 -0.26 -0.60 16 28 H 0.14 -0.38 6.41 -52.48 -0.34 -0.71 16 29 H 0.40 -1.00 4.90 -40.82 -0.20 -1.20 16 30 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.07 -0.13 6.51 -51.93 -0.34 -0.47 16 34 H 0.38 -1.34 9.08 45.56 0.41 -0.93 16 35 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.07 -0.04 7.60 -51.93 -0.39 -0.43 16 37 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.15 0.27 7.65 -52.48 -0.40 -0.13 16 LS Contribution 335.32 15.07 5.05 5.05 Total: 0.00 -7.38 335.32 -10.79 -18.17 By element: Atomic # 1 Polarization: -6.07 SS G_CDS: -4.08 Total: -10.15 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -3.34 Total: -1.54 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.23 Total: 0.36 kcal Atomic # 8 Polarization: -2.54 SS G_CDS: -0.83 Total: -3.38 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.06 Total: -6.24 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -7.38 -10.79 -18.17 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.800 kcal (2) G-P(sol) polarization free energy of solvation -7.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.786 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds