Wall clock time and date at job start Sat Mar 6 2021 23:53:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53005 * 109.47104 * 2 1 4 4 C 1.53001 * 109.46846 * 294.32623 * 3 2 1 5 5 C 1.52998 * 109.47328 * 174.32251 * 3 2 1 6 6 C 1.50693 * 109.47159 * 179.25402 * 5 3 2 7 7 O 1.21277 * 120.00226 * 245.54965 * 6 5 3 8 8 N 1.34781 * 119.99906 * 65.55463 * 6 5 3 9 9 C 1.46503 * 119.99940 * 175.01368 * 8 6 5 10 10 H 1.08999 * 109.47399 * 34.99417 * 9 8 6 11 11 C 1.52996 * 109.47124 * 154.99778 * 9 8 6 12 12 C 1.52998 * 109.47057 * 179.97438 * 11 9 8 13 13 C 1.52995 * 109.47132 * 299.99831 * 12 11 9 14 14 H 1.09002 * 109.46923 * 179.97438 * 13 12 11 15 15 O 1.42903 * 109.47456 * 299.99991 * 13 12 11 16 16 C 1.52996 * 109.47012 * 60.00141 * 13 12 11 17 17 C 1.52998 * 109.47427 * 299.99971 * 16 13 12 18 18 N 1.46498 * 109.47051 * 59.25525 * 5 3 2 19 19 C 1.36352 * 125.63626 * 66.08675 * 18 5 3 20 20 C 1.34845 * 108.21888 * 180.02562 * 19 18 5 21 21 C 1.40893 * 107.41887 * 359.97438 * 20 19 18 22 22 C 1.34851 * 107.41488 * 359.73778 * 21 20 19 23 23 C 1.50703 * 125.88994 * 180.25017 * 22 21 20 24 24 O 1.42895 * 109.47160 * 150.19999 * 23 22 21 25 25 Si 1.86302 * 109.46978 * 30.20320 * 23 22 21 26 26 H 1.08999 * 109.46937 * 60.00414 * 1 2 3 27 27 H 1.09002 * 109.46772 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47585 * 299.99773 * 1 2 3 29 29 H 1.08997 * 109.47343 * 239.99764 * 2 1 3 30 30 H 1.08997 * 109.47362 * 119.99897 * 2 1 3 31 31 H 1.09002 * 109.46933 * 54.31945 * 3 2 1 32 32 H 1.09001 * 109.46706 * 187.68012 * 4 3 2 33 33 H 1.09004 * 109.46815 * 307.67564 * 4 3 2 34 34 H 1.08992 * 109.47258 * 67.67969 * 4 3 2 35 35 H 1.09000 * 109.47180 * 299.25807 * 5 3 2 36 36 H 0.97002 * 119.99826 * 355.00828 * 8 6 5 37 37 H 1.08999 * 109.47277 * 59.99565 * 11 9 8 38 38 H 1.08998 * 109.47403 * 299.99979 * 11 9 8 39 39 H 1.08993 * 109.47251 * 60.00263 * 12 11 9 40 40 H 1.09006 * 109.47001 * 179.97438 * 12 11 9 41 41 H 0.96691 * 114.00147 * 180.02562 * 15 13 12 42 42 H 1.08999 * 109.47277 * 59.99992 * 16 13 12 43 43 H 1.09007 * 109.47306 * 179.97438 * 16 13 12 44 44 H 1.08997 * 109.47552 * 180.02562 * 17 16 13 45 45 H 1.09005 * 109.46732 * 299.99892 * 17 16 13 46 46 H 1.07996 * 125.88480 * 359.97438 * 19 18 5 47 47 H 1.08002 * 126.29104 * 180.02562 * 20 19 18 48 48 H 1.08005 * 126.29160 * 180.02562 * 21 20 19 49 49 H 1.09000 * 109.47291 * 270.20595 * 23 22 21 50 50 H 0.96698 * 114.00350 * 179.97438 * 24 23 22 51 51 H 1.48491 * 110.00220 * 59.99846 * 25 23 22 52 52 H 1.48503 * 109.99912 * 181.32039 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 1.6497 2.1214 -1.3145 5 6 3.5633 1.4450 0.1427 6 6 4.0673 2.8650 0.1243 7 8 4.7669 3.2484 -0.7891 8 7 3.7406 3.7090 1.1230 9 6 4.3179 5.0549 1.1630 10 1 4.4367 5.4297 0.1464 11 6 3.3884 5.9856 1.9445 12 6 3.9917 7.3910 1.9868 13 6 5.3574 7.3392 2.6745 14 1 5.7873 8.3404 2.7042 15 8 5.2014 6.8476 4.0071 16 6 6.2869 6.4086 1.8930 17 6 5.6837 5.0032 1.8507 18 7 4.1591 0.7009 -0.9697 19 6 4.1221 1.0691 -2.2821 20 6 4.7761 0.1342 -3.0009 21 6 5.2342 -0.8468 -2.0993 22 6 4.8477 -0.4710 -0.8632 23 6 5.1249 -1.2198 0.4149 24 8 5.2150 -0.2938 1.4995 25 14 6.7327 -2.1473 0.2550 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 1.8933 -0.5138 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 1.5960 1.9849 0.8348 32 1 2.1270 3.0996 -1.3738 33 1 1.9772 1.5059 -2.1524 34 1 0.5672 2.2423 -1.3535 35 1 3.8407 0.9731 1.0853 36 1 3.1232 3.4253 1.8153 37 1 3.2697 5.6107 2.9611 38 1 2.4153 6.0221 1.4548 39 1 4.1106 7.7660 0.9703 40 1 3.3292 8.0541 2.5431 41 1 6.0288 6.7884 4.5039 42 1 6.4059 6.7836 0.8766 43 1 7.2601 6.3721 2.3827 44 1 6.3461 4.3400 1.2944 45 1 5.5647 4.6281 2.8672 46 1 3.6496 1.9560 -2.6776 47 1 4.9226 0.1374 -4.0709 48 1 5.7961 -1.7341 -2.3513 49 1 4.3160 -1.9251 0.6055 50 1 5.3920 -0.7069 2.3557 51 1 7.8436 -1.1969 -0.0051 52 1 7.0017 -2.9153 1.4973 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12360566.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:35 Heat of formation + Delta-G solvation = -73.452798 kcal Electronic energy + Delta-G solvation = -32208.229086 eV Core-core repulsion = 28174.819065 eV Total energy + Delta-G solvation = -4033.410021 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.209 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -42.80798 -41.08691 -39.74920 -37.92500 -37.69807 -36.74401 -34.37064 -33.29336 -31.91305 -31.35367 -30.58261 -29.83993 -27.90814 -25.86945 -25.27672 -23.90090 -23.38078 -21.88672 -21.59302 -21.39304 -20.98702 -19.99062 -18.59901 -18.46447 -17.91420 -17.62902 -17.15010 -16.83799 -16.61122 -16.21422 -16.08315 -15.75117 -15.39198 -15.16001 -14.96405 -14.52382 -14.45786 -14.37313 -14.10265 -14.05351 -13.92130 -13.61573 -13.36977 -13.30413 -13.19401 -13.12401 -13.05179 -12.96525 -12.81075 -12.50805 -12.30041 -12.12851 -12.11300 -11.96343 -11.79318 -11.68163 -11.58312 -11.33148 -11.08912 -10.78641 -10.66187 -10.19731 -9.48375 -8.80250 -4.90093 0.99869 1.37056 1.48602 1.60771 1.76575 1.99422 2.15596 2.27229 3.08142 3.29966 3.36517 3.55026 3.62986 3.65255 3.74637 3.80929 3.91918 3.96093 4.00451 4.14803 4.22392 4.30317 4.31502 4.36705 4.39110 4.43247 4.44044 4.50631 4.56502 4.56721 4.63106 4.74576 4.79087 4.81908 4.89107 4.90933 4.95976 4.97644 5.06143 5.07045 5.07415 5.14310 5.18282 5.27639 5.31239 5.36100 5.41402 5.41776 5.43990 6.09635 6.27005 6.33326 6.48302 6.54064 6.84466 7.03790 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.108 4.108 3 C -0.089 4.089 4 C -0.160 4.160 5 C 0.112 3.888 6 C 0.510 3.490 7 O -0.566 6.566 8 N -0.709 5.709 9 C 0.150 3.850 10 H 0.065 0.935 11 C -0.112 4.112 12 C -0.113 4.113 13 C 0.106 3.894 14 H 0.067 0.933 15 O -0.577 6.577 16 C -0.147 4.147 17 C -0.117 4.117 18 N -0.412 5.412 19 C 0.007 3.993 20 C -0.224 4.224 21 C -0.202 4.202 22 C 0.009 3.991 23 C -0.050 4.050 24 O -0.558 6.558 25 Si 0.783 3.217 26 H 0.053 0.947 27 H 0.057 0.943 28 H 0.064 0.936 29 H 0.053 0.947 30 H 0.071 0.929 31 H 0.109 0.891 32 H 0.039 0.961 33 H 0.061 0.939 34 H 0.076 0.924 35 H 0.156 0.844 36 H 0.414 0.586 37 H 0.078 0.922 38 H 0.076 0.924 39 H 0.082 0.918 40 H 0.079 0.921 41 H 0.390 0.610 42 H 0.069 0.931 43 H 0.076 0.924 44 H 0.034 0.966 45 H 0.074 0.926 46 H 0.153 0.847 47 H 0.143 0.857 48 H 0.165 0.835 49 H 0.105 0.895 50 H 0.400 0.600 51 H -0.321 1.321 52 H -0.272 1.272 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.724 -1.716 4.800 6.313 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.146 4.146 3 C -0.108 4.108 4 C -0.217 4.217 5 C 0.007 3.993 6 C 0.296 3.704 7 O -0.444 6.444 8 N -0.361 5.361 9 C 0.046 3.954 10 H 0.083 0.917 11 C -0.150 4.150 12 C -0.151 4.151 13 C 0.047 3.953 14 H 0.085 0.915 15 O -0.385 6.385 16 C -0.186 4.186 17 C -0.156 4.156 18 N -0.088 5.088 19 C -0.123 4.123 20 C -0.248 4.248 21 C -0.226 4.226 22 C -0.102 4.102 23 C -0.159 4.159 24 O -0.370 6.370 25 Si 0.688 3.312 26 H 0.072 0.928 27 H 0.076 0.924 28 H 0.083 0.917 29 H 0.072 0.928 30 H 0.090 0.910 31 H 0.127 0.873 32 H 0.058 0.942 33 H 0.080 0.920 34 H 0.095 0.905 35 H 0.173 0.827 36 H 0.251 0.749 37 H 0.097 0.903 38 H 0.094 0.906 39 H 0.101 0.899 40 H 0.098 0.902 41 H 0.239 0.761 42 H 0.088 0.912 43 H 0.094 0.906 44 H 0.053 0.947 45 H 0.092 0.908 46 H 0.170 0.830 47 H 0.160 0.840 48 H 0.182 0.818 49 H 0.123 0.877 50 H 0.252 0.748 51 H -0.249 1.249 52 H -0.198 1.198 Dipole moment (debyes) X Y Z Total from point charges -3.322 -0.989 4.118 5.383 hybrid contribution 0.554 0.667 1.093 1.395 sum -2.768 -0.323 5.211 5.909 Atomic orbital electron populations 1.21778 0.94520 1.02199 1.02249 1.21457 0.96706 0.94132 1.02314 1.21550 0.89898 0.99090 1.00258 1.22167 1.02577 0.99457 0.97461 1.21895 0.95181 0.89469 0.92802 1.20904 0.79773 0.87996 0.81743 1.90746 1.39438 1.77832 1.36412 1.45895 1.48206 1.14306 1.27710 1.20954 0.93207 0.81655 0.99619 0.91658 1.21623 0.98044 0.94512 1.00822 1.21552 0.95687 0.96855 1.00995 1.21784 0.95618 0.95730 0.82177 0.91464 1.86462 1.37849 1.88563 1.25603 1.22204 0.99492 0.95128 1.01741 1.21713 0.95729 0.97259 1.00864 1.43516 1.41705 1.17922 1.05618 1.21835 1.06211 1.01153 0.83108 1.21058 1.06537 0.97247 0.99931 1.20820 1.07888 1.02824 0.91088 1.20085 1.03635 0.90790 0.95646 1.24551 1.12380 0.95108 0.83855 1.86360 1.93791 1.36858 1.19996 0.93541 0.72223 0.80583 0.84856 0.92782 0.92352 0.91731 0.92842 0.91012 0.87274 0.94158 0.91994 0.90514 0.82737 0.74948 0.90301 0.90555 0.89919 0.90191 0.76053 0.91230 0.90573 0.94741 0.90760 0.82974 0.83959 0.81802 0.87691 0.74796 1.24941 1.19762 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.55 9.68 71.98 0.70 1.25 16 2 C -0.11 0.25 5.14 30.60 0.16 0.40 16 3 C -0.09 0.15 2.23 -10.79 -0.02 0.13 16 4 C -0.16 -0.17 7.32 71.98 0.53 0.36 16 5 C 0.11 0.33 2.42 44.24 0.11 0.43 16 6 C 0.51 3.50 5.62 87.65 0.49 4.00 16 7 O -0.57 -9.08 14.57 -3.02 -0.04 -9.12 16 8 N -0.71 -0.62 5.04 -442.54 -2.23 -2.85 16 9 C 0.15 0.31 2.50 44.99 0.11 0.42 16 10 H 0.07 0.46 7.51 -2.39 -0.02 0.44 16 11 C -0.11 0.21 5.25 30.59 0.16 0.37 16 12 C -0.11 0.23 5.66 30.59 0.17 0.41 16 13 C 0.11 -0.21 3.77 30.59 0.12 -0.10 16 14 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 15 O -0.58 0.67 11.97 -148.98 -1.78 -1.11 16 16 C -0.15 0.04 5.64 30.59 0.17 0.22 16 17 C -0.12 -0.35 5.35 30.59 0.16 -0.18 16 18 N -0.41 -2.96 1.80 -491.53 -0.89 -3.85 16 19 C 0.01 0.07 7.40 83.21 0.62 0.69 16 20 C -0.22 -2.03 10.86 22.14 0.24 -1.79 16 21 C -0.20 -1.28 9.43 22.14 0.21 -1.07 16 22 C 0.01 0.06 6.19 41.08 0.25 0.31 16 23 C -0.05 0.03 2.98 71.24 0.21 0.24 16 24 O -0.56 0.38 9.77 -148.98 -1.46 -1.07 16 25 Si 0.78 -0.29 31.15 68.60 2.14 1.85 16 26 H 0.05 -0.14 6.76 -2.39 -0.02 -0.16 16 27 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 28 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 29 H 0.05 0.10 7.76 -2.39 -0.02 0.08 16 30 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 31 H 0.11 -0.66 7.83 -2.39 -0.02 -0.68 16 32 H 0.04 0.18 6.92 -2.39 -0.02 0.16 16 33 H 0.06 0.24 5.39 -2.39 -0.01 0.23 16 34 H 0.08 -0.10 6.97 -2.39 -0.02 -0.12 16 35 H 0.16 0.15 5.03 -2.39 -0.01 0.13 16 36 H 0.41 -2.05 8.29 -92.71 -0.77 -2.82 16 37 H 0.08 -0.12 7.68 -2.39 -0.02 -0.13 16 38 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 39 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 40 H 0.08 -0.19 8.14 -2.38 -0.02 -0.21 16 41 H 0.39 -2.93 9.08 -74.06 -0.67 -3.60 16 42 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 43 H 0.08 -0.14 8.14 -2.38 -0.02 -0.16 16 44 H 0.03 0.31 8.14 -2.39 -0.02 0.29 16 45 H 0.07 0.17 7.68 -2.38 -0.02 0.15 16 46 H 0.15 1.58 6.29 -2.91 -0.02 1.57 16 47 H 0.14 0.91 8.06 -2.91 -0.02 0.89 16 48 H 0.16 0.08 6.90 -2.91 -0.02 0.06 16 49 H 0.11 -0.61 7.96 -2.39 -0.02 -0.63 16 50 H 0.40 -3.73 8.74 -74.06 -0.65 -4.38 16 51 H -0.32 -3.52 7.11 99.48 0.71 -2.81 16 52 H -0.27 -0.35 7.11 99.48 0.71 0.36 16 Total: 0.00 -22.04 392.23 -0.99 -23.03 By element: Atomic # 1 Polarization: -11.84 SS G_CDS: -1.12 Total: -12.96 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: 4.39 Total: 6.09 kcal Atomic # 7 Polarization: -3.58 SS G_CDS: -3.12 Total: -6.70 kcal Atomic # 8 Polarization: -8.03 SS G_CDS: -3.28 Total: -11.31 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: 2.14 Total: 1.85 kcal Total: -22.04 -0.99 -23.03 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12360566.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.419 kcal (2) G-P(sol) polarization free energy of solvation -22.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.458 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.995 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.034 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds