Wall clock time and date at job start Sat Mar 6 2021 23:53:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86299 * 109.47028 * 2 1 4 4 C 1.50696 * 109.47144 * 239.99437 * 2 1 3 5 5 C 1.38399 * 119.83152 * 300.00168 * 4 2 1 6 6 C 1.37889 * 120.17412 * 179.97438 * 5 4 2 7 7 C 1.39839 * 119.82189 * 0.02562 * 6 5 4 8 8 C 1.47216 * 120.16549 * 179.97438 * 7 6 5 9 9 C 1.34807 * 119.99573 * 180.02562 * 8 7 6 10 10 C 1.46436 * 119.99548 * 180.02562 * 9 8 7 11 11 O 1.21686 * 119.99912 * 359.71674 * 10 9 8 12 12 N 1.34777 * 119.99835 * 180.02562 * 10 9 8 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 H 1.09007 * 109.46674 * 324.99519 * 13 12 10 15 15 C 1.52998 * 109.47229 * 84.99168 * 13 12 10 16 16 C 1.52996 * 109.47014 * 180.02562 * 15 13 12 17 17 C 1.53001 * 109.47621 * 300.00631 * 16 15 13 18 18 H 1.08992 * 109.47805 * 180.02562 * 17 16 15 19 19 O 1.42902 * 109.46691 * 299.99812 * 17 16 15 20 20 C 1.53001 * 109.46935 * 59.99502 * 17 16 15 21 21 C 1.52996 * 109.47401 * 300.00254 * 20 17 16 22 22 C 1.39828 * 119.66576 * 0.27038 * 7 6 5 23 23 C 1.37894 * 119.82196 * 359.42770 * 22 7 6 24 24 H 0.96692 * 113.99995 * 59.99989 * 1 2 3 25 25 H 1.09005 * 109.47091 * 119.99438 * 2 1 3 26 26 H 1.48491 * 110.00105 * 59.99693 * 3 2 1 27 27 H 1.48497 * 109.99878 * 181.31975 * 3 2 1 28 28 H 1.08006 * 119.91143 * 359.97438 * 5 4 2 29 29 H 1.07996 * 120.09053 * 179.97438 * 6 5 4 30 30 H 1.07999 * 120.00098 * 359.97438 * 8 7 6 31 31 H 1.07999 * 120.00329 * 359.97438 * 9 8 7 32 32 H 0.97004 * 119.99532 * 359.97438 * 12 10 9 33 33 H 1.08993 * 109.47532 * 300.00643 * 15 13 12 34 34 H 1.09002 * 109.46580 * 60.00690 * 15 13 12 35 35 H 1.08997 * 109.47231 * 180.02562 * 16 15 13 36 36 H 1.08994 * 109.47105 * 60.00509 * 16 15 13 37 37 H 0.96700 * 114.00330 * 300.00114 * 19 17 16 38 38 H 1.09001 * 109.46912 * 180.02562 * 20 17 16 39 39 H 1.08994 * 109.46917 * 60.00657 * 20 17 16 40 40 H 1.08994 * 109.47414 * 300.00099 * 21 20 17 41 41 H 1.08997 * 109.47261 * 179.97438 * 21 20 17 42 42 H 1.08001 * 120.09236 * 179.72922 * 22 7 6 43 43 H 1.08001 * 119.91725 * 180.27445 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.5949 -2.0356 -1.4458 6 6 2.0502 -2.6924 -2.5695 7 6 2.8544 -2.0162 -3.4922 8 6 3.3451 -2.7103 -4.6942 9 6 4.1206 -2.0553 -5.5813 10 6 4.6083 -2.7455 -6.7771 11 8 4.3178 -3.9118 -6.9675 12 7 5.3840 -2.0909 -7.6638 13 6 5.8724 -2.7815 -8.8599 14 1 6.0771 -3.8247 -8.6189 15 6 4.8103 -2.7110 -9.9589 16 6 5.3201 -3.4328 -11.2079 17 6 6.6051 -2.7611 -11.6964 18 1 6.9681 -3.2750 -12.5864 19 8 6.3371 -1.3936 -12.0127 20 6 7.6671 -2.8317 -10.5973 21 6 7.1573 -2.1098 -9.3484 22 6 3.1951 -0.6794 -3.2644 23 6 2.7268 -0.0345 -2.1391 24 1 -0.3933 0.4417 -0.7650 25 1 1.7924 -0.5138 0.8901 26 1 1.5615 2.4679 1.2084 27 1 3.5346 1.7703 -0.0321 28 1 0.9740 -2.5565 -0.7319 29 1 1.7871 -3.7265 -2.7360 30 1 3.0845 -3.7444 -4.8648 31 1 4.3815 -1.0213 -5.4104 32 1 5.6189 -1.1624 -7.5099 33 1 3.8951 -3.1899 -9.6111 34 1 4.6056 -1.6678 -10.1999 35 1 4.5637 -3.3822 -11.9910 36 1 5.5246 -4.4759 -10.9666 37 1 5.6714 -1.2728 -12.7037 38 1 8.5824 -2.3527 -10.9451 39 1 7.8715 -3.8747 -10.3560 40 1 6.9529 -1.0667 -9.5896 41 1 7.9137 -2.1604 -8.5652 42 1 3.8194 -0.1518 -3.9704 43 1 2.9854 0.9994 -1.9639 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:40 Heat of formation + Delta-G solvation = -84.019903 kcal Electronic energy + Delta-G solvation = -23774.764796 eV Core-core repulsion = 20172.020656 eV Total energy + Delta-G solvation = -3602.744140 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.151 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.13655 -40.64279 -39.62441 -37.83061 -36.66812 -35.04282 -34.22174 -32.29354 -31.87074 -31.38862 -29.71546 -27.10489 -24.52047 -24.02628 -23.82762 -22.88638 -21.75911 -21.12696 -20.24198 -18.85159 -18.12401 -17.77395 -17.56729 -16.91659 -16.61151 -16.45416 -16.18696 -15.93413 -15.71412 -15.43068 -15.13602 -14.88447 -14.63713 -14.43932 -14.19218 -14.03042 -13.85748 -13.51855 -13.32652 -13.24478 -13.08055 -12.99224 -12.48181 -12.27877 -12.07553 -12.04716 -11.76007 -11.61546 -11.34816 -11.29504 -10.97075 -10.68802 -10.49173 -10.06246 -10.00120 -9.28043 -5.09726 -0.56913 0.31522 0.90247 1.22924 1.57121 1.91859 2.20483 2.32271 2.77454 3.25347 3.37559 3.50262 3.59103 3.67858 3.68844 3.77266 3.82687 3.94756 4.02162 4.11785 4.17646 4.19999 4.26119 4.36658 4.38316 4.44947 4.45314 4.48016 4.62156 4.76802 4.85429 4.89616 4.90619 5.00031 5.03195 5.08162 5.12596 5.13964 5.24876 5.32626 5.35525 5.41389 5.55771 5.58468 5.82244 6.50412 6.56567 6.66705 7.29921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.071 4.071 3 Si 0.689 3.311 4 C -0.108 4.108 5 C -0.095 4.095 6 C -0.093 4.093 7 C -0.072 4.072 8 C -0.017 4.017 9 C -0.213 4.213 10 C 0.548 3.452 11 O -0.544 6.544 12 N -0.722 5.722 13 C 0.146 3.854 14 H 0.087 0.913 15 C -0.124 4.124 16 C -0.150 4.150 17 C 0.102 3.898 18 H 0.057 0.943 19 O -0.564 6.564 20 C -0.109 4.109 21 C -0.123 4.123 22 C -0.096 4.096 23 C -0.120 4.120 24 H 0.380 0.620 25 H 0.115 0.885 26 H -0.254 1.254 27 H -0.258 1.258 28 H 0.131 0.869 29 H 0.131 0.869 30 H 0.137 0.863 31 H 0.130 0.870 32 H 0.401 0.599 33 H 0.066 0.934 34 H 0.071 0.929 35 H 0.068 0.932 36 H 0.074 0.926 37 H 0.377 0.623 38 H 0.075 0.925 39 H 0.078 0.922 40 H 0.078 0.922 41 H 0.068 0.932 42 H 0.132 0.868 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.383 3.260 -2.836 4.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.182 4.182 3 Si 0.591 3.409 4 C -0.109 4.109 5 C -0.113 4.113 6 C -0.110 4.110 7 C -0.072 4.072 8 C -0.037 4.037 9 C -0.234 4.234 10 C 0.337 3.663 11 O -0.423 6.423 12 N -0.372 5.372 13 C 0.041 3.959 14 H 0.105 0.895 15 C -0.163 4.163 16 C -0.189 4.189 17 C 0.043 3.957 18 H 0.075 0.925 19 O -0.370 6.370 20 C -0.147 4.147 21 C -0.161 4.161 22 C -0.114 4.114 23 C -0.137 4.137 24 H 0.227 0.773 25 H 0.133 0.867 26 H -0.179 1.179 27 H -0.183 1.183 28 H 0.148 0.852 29 H 0.149 0.851 30 H 0.155 0.845 31 H 0.148 0.852 32 H 0.235 0.765 33 H 0.085 0.915 34 H 0.089 0.911 35 H 0.087 0.913 36 H 0.093 0.907 37 H 0.225 0.775 38 H 0.094 0.906 39 H 0.097 0.903 40 H 0.096 0.904 41 H 0.087 0.913 42 H 0.150 0.850 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.220 2.809 -1.531 3.424 hybrid contribution -0.207 -0.308 -0.241 0.443 sum 1.012 2.502 -1.772 3.229 Atomic orbital electron populations 1.86513 1.16941 1.81695 1.49286 1.25104 0.85377 1.10210 0.97494 0.94705 0.80944 0.77943 0.87279 1.20524 0.98333 0.95231 0.96763 1.20991 0.99038 0.93802 0.97450 1.21466 0.96087 1.00086 0.93410 1.19071 0.99145 0.93971 0.95045 1.22405 0.91360 0.99605 0.90304 1.22921 1.03397 1.01122 0.95965 1.18340 0.78310 0.86463 0.83191 1.90825 1.57782 1.16588 1.77121 1.45955 1.52285 1.15781 1.23204 1.20998 0.93335 0.97585 0.83934 0.89529 1.21809 0.98575 1.01556 0.94347 1.22221 0.97939 1.00567 0.98155 1.21810 0.94438 0.82552 0.96880 0.92475 1.86501 1.63848 1.25449 1.61196 1.21495 0.97956 1.01336 0.93916 1.21712 0.95992 1.00964 0.97427 1.21359 0.98981 0.93802 0.97216 1.20958 0.98559 0.99556 0.94629 0.77294 0.86749 1.17913 1.18263 0.85152 0.85064 0.84490 0.85203 0.76452 0.91524 0.91072 0.91283 0.90688 0.77543 0.90600 0.90300 0.90353 0.91339 0.85048 0.85281 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.06 12.76 -35.23 -0.45 -0.39 16 2 C -0.07 0.04 2.82 36.00 0.10 0.14 16 3 Si 0.69 -1.02 29.77 -169.99 -5.06 -6.08 16 4 C -0.11 0.03 5.40 -104.50 -0.56 -0.53 16 5 C -0.09 -0.01 9.59 -39.65 -0.38 -0.39 16 6 C -0.09 0.00 9.80 -39.11 -0.38 -0.39 16 7 C -0.07 -0.01 5.87 -105.06 -0.62 -0.62 16 8 C -0.02 -0.01 9.46 -37.15 -0.35 -0.36 16 9 C -0.21 0.01 9.41 -37.50 -0.35 -0.34 16 10 C 0.55 1.24 7.71 -12.96 -0.10 1.14 16 11 O -0.54 -3.36 15.89 5.20 0.08 -3.28 16 12 N -0.72 0.05 5.07 -55.20 -0.28 -0.23 16 13 C 0.15 0.06 2.45 -67.93 -0.17 -0.11 16 14 H 0.09 0.19 7.57 -51.92 -0.39 -0.20 16 15 C -0.12 -0.05 5.35 -26.73 -0.14 -0.19 16 16 C -0.15 0.14 5.64 -26.73 -0.15 -0.01 16 17 C 0.10 -0.11 3.77 -26.73 -0.10 -0.21 16 18 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 19 O -0.56 0.22 11.97 -35.23 -0.42 -0.20 16 20 C -0.11 0.11 5.66 -26.73 -0.15 -0.04 16 21 C -0.12 0.10 5.25 -26.73 -0.14 -0.04 16 22 C -0.10 0.09 9.41 -39.11 -0.37 -0.28 16 23 C -0.12 0.12 8.65 -39.65 -0.34 -0.22 16 24 H 0.38 -1.50 8.70 45.56 0.40 -1.10 16 25 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 26 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 27 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 28 H 0.13 -0.05 8.06 -52.48 -0.42 -0.47 16 29 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 30 H 0.14 0.16 7.52 -52.49 -0.39 -0.23 16 31 H 0.13 -0.37 6.07 -52.49 -0.32 -0.69 16 32 H 0.40 -1.06 8.58 -40.82 -0.35 -1.41 16 33 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 34 H 0.07 0.03 7.68 -51.93 -0.40 -0.37 16 35 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.38 -1.38 9.08 45.56 0.41 -0.96 16 38 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 39 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.08 -0.03 7.68 -51.93 -0.40 -0.43 16 41 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.13 -0.40 6.17 -52.49 -0.32 -0.73 16 43 H 0.13 -0.37 4.85 -52.49 -0.25 -0.63 16 LS Contribution 350.90 15.07 5.29 5.29 Total: 0.00 -8.31 350.90 -10.49 -18.80 By element: Atomic # 1 Polarization: -6.01 SS G_CDS: -5.44 Total: -11.45 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -4.21 Total: -2.46 kcal Atomic # 7 Polarization: 0.05 SS G_CDS: -0.28 Total: -0.23 kcal Atomic # 8 Polarization: -3.09 SS G_CDS: -0.79 Total: -3.87 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.06 Total: -6.08 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -8.31 -10.49 -18.80 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.221 kcal (2) G-P(sol) polarization free energy of solvation -8.307 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.492 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds