Wall clock time and date at job start Sat Mar 6 2021 23:53:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86305 * 109.47008 * 2 1 4 4 C 1.50701 * 109.47499 * 119.99661 * 2 1 3 5 5 C 1.38620 * 119.84182 * 74.99800 * 4 2 1 6 6 F 1.35103 * 119.91239 * 0.02562 * 5 4 2 7 7 C 1.38102 * 120.16729 * 179.97438 * 5 4 2 8 8 C 1.39623 * 119.85030 * 0.02762 * 7 5 4 9 9 C 1.47696 * 120.15462 * 179.97438 * 8 7 5 10 10 O 1.21569 * 120.00415 * 180.27332 * 9 8 7 11 11 N 1.34784 * 119.99856 * 0.02562 * 9 8 7 12 12 C 1.46499 * 119.99971 * 179.97438 * 11 9 8 13 13 H 1.09007 * 109.46956 * 325.00197 * 12 11 9 14 14 C 1.52995 * 109.47022 * 84.99732 * 12 11 9 15 15 C 1.53005 * 109.47228 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.47076 * 300.00529 * 15 14 12 17 17 H 1.09005 * 109.46887 * 179.97438 * 16 15 14 18 18 O 1.42899 * 109.47149 * 299.99438 * 16 15 14 19 19 C 1.52996 * 109.47151 * 59.99647 * 16 15 14 20 20 C 1.52999 * 109.47155 * 205.00183 * 12 11 9 21 21 C 1.39838 * 119.68910 * 0.25071 * 8 7 5 22 22 F 1.35100 * 120.08131 * 179.72259 * 21 8 7 23 23 C 1.38228 * 119.84430 * 254.98150 * 4 2 1 24 24 H 0.96703 * 114.00180 * 300.00007 * 1 2 3 25 25 H 1.09000 * 109.47634 * 239.99823 * 2 1 3 26 26 H 1.48496 * 110.00182 * 178.68363 * 3 2 1 27 27 H 1.48502 * 109.99693 * 300.00147 * 3 2 1 28 28 H 1.07998 * 120.07841 * 180.02562 * 7 5 4 29 29 H 0.96999 * 120.00044 * 359.97438 * 11 9 8 30 30 H 1.09001 * 109.47831 * 300.00098 * 14 12 11 31 31 H 1.08996 * 109.47227 * 60.00172 * 14 12 11 32 32 H 1.08996 * 109.47630 * 180.02562 * 15 14 12 33 33 H 1.09007 * 109.46829 * 60.00417 * 15 14 12 34 34 H 0.96700 * 114.00254 * 300.00755 * 18 16 15 35 35 H 1.09006 * 109.46787 * 180.02562 * 19 16 15 36 36 H 1.09003 * 109.47095 * 60.00411 * 19 16 15 37 37 H 1.08996 * 109.46825 * 299.99663 * 20 12 11 38 38 H 1.08993 * 109.47204 * 60.00070 * 20 12 11 39 39 H 1.07996 * 119.92573 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.8680 -2.0932 1.3029 6 9 1.3567 -2.7991 0.2707 7 6 2.3269 -2.7510 2.4271 8 6 2.8555 -2.0200 3.4928 9 6 3.3477 -2.7167 4.6985 10 8 3.8028 -2.0772 5.6269 11 7 3.2878 -4.0612 4.7716 12 6 3.7766 -4.7522 5.9673 13 1 4.6400 -4.2202 6.3671 14 6 2.6690 -4.7920 7.0220 15 6 3.1792 -5.5143 8.2706 16 6 3.5852 -6.9429 7.9032 17 1 3.9491 -7.4573 8.7926 18 8 2.4532 -7.6399 7.3790 19 6 4.6929 -6.9031 6.8485 20 6 4.1831 -6.1809 5.6004 21 6 2.9112 -0.6249 3.4156 22 9 3.4158 0.0906 4.4445 23 6 2.4537 0.0201 2.2814 24 1 -0.3934 0.4417 0.7651 25 1 1.7924 -0.5138 -0.8899 26 1 3.5345 1.7704 0.0321 27 1 1.5614 2.4679 -1.2085 28 1 2.2772 -3.8285 2.4818 29 1 2.9211 -4.5712 4.0326 30 1 2.3794 -3.7742 7.2835 31 1 1.8057 -5.3239 6.6223 32 1 2.3900 -5.5430 9.0218 33 1 4.0428 -4.9826 8.6705 34 1 1.7106 -7.7037 7.9951 35 1 4.9817 -7.9210 6.5865 36 1 5.5564 -6.3715 7.2484 37 1 3.3197 -6.7129 5.2007 38 1 4.9722 -6.1525 4.8491 39 1 2.5007 1.0972 2.2180 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12360598.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:41 Heat of formation + Delta-G solvation = -182.113070 kcal Electronic energy + Delta-G solvation = -26503.148028 eV Core-core repulsion = 22241.006058 eV Total energy + Delta-G solvation = -4262.141970 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.116 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.13734 -50.11019 -41.57093 -40.33509 -39.50883 -37.65779 -36.73882 -34.60614 -33.18840 -31.84790 -31.39665 -29.86108 -27.66766 -24.42706 -24.32562 -23.80898 -22.92782 -21.75397 -20.99748 -19.64120 -18.83371 -18.65854 -17.97269 -17.73900 -17.37818 -17.17941 -16.99498 -16.60114 -16.42626 -16.11778 -15.97694 -15.89126 -15.57446 -15.48738 -15.20454 -14.73790 -14.41385 -14.20587 -14.08438 -13.82602 -13.59885 -13.24313 -13.18393 -13.05815 -12.98715 -12.47608 -12.35657 -12.18335 -12.05459 -11.64169 -11.32856 -11.22930 -10.71073 -10.62704 -10.59419 -10.19870 -9.84676 -5.05840 -0.83556 -0.33279 1.15215 1.36876 1.61583 1.82660 1.93011 2.21838 2.76613 2.81966 3.09741 3.27013 3.38555 3.46183 3.53356 3.69540 3.71977 3.78597 3.96734 4.05263 4.14937 4.20531 4.29599 4.31454 4.37393 4.42239 4.49539 4.52830 4.62066 4.66868 4.70954 4.88517 4.95382 5.03912 5.12571 5.13562 5.23187 5.30090 5.35416 5.44075 6.29023 6.67325 6.90405 6.96182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.078 4.078 3 Si 0.780 3.220 4 C -0.096 4.096 5 C 0.099 3.901 6 F -0.130 7.130 7 C -0.079 4.079 8 C -0.149 4.149 9 C 0.557 3.443 10 O -0.559 6.559 11 N -0.705 5.705 12 C 0.147 3.853 13 H 0.072 0.928 14 C -0.120 4.120 15 C -0.147 4.147 16 C 0.104 3.896 17 H 0.066 0.934 18 O -0.579 6.579 19 C -0.113 4.113 20 C -0.116 4.116 21 C 0.142 3.858 22 F -0.121 7.121 23 C -0.119 4.119 24 H 0.399 0.601 25 H 0.114 0.886 26 H -0.280 1.280 27 H -0.290 1.290 28 H 0.177 0.823 29 H 0.413 0.587 30 H 0.046 0.954 31 H 0.074 0.926 32 H 0.078 0.922 33 H 0.072 0.928 34 H 0.391 0.609 35 H 0.077 0.923 36 H 0.085 0.915 37 H 0.078 0.922 38 H 0.075 0.925 39 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.561 -1.693 1.205 2.599 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.187 4.187 3 Si 0.684 3.316 4 C -0.098 4.098 5 C 0.080 3.920 6 F -0.108 7.108 7 C -0.098 4.098 8 C -0.154 4.154 9 C 0.344 3.656 10 O -0.438 6.438 11 N -0.357 5.357 12 C 0.043 3.957 13 H 0.090 0.910 14 C -0.159 4.159 15 C -0.185 4.185 16 C 0.045 3.955 17 H 0.084 0.916 18 O -0.387 6.387 19 C -0.151 4.151 20 C -0.154 4.154 21 C 0.121 3.879 22 F -0.100 7.100 23 C -0.137 4.137 24 H 0.250 0.750 25 H 0.131 0.869 26 H -0.206 1.206 27 H -0.217 1.217 28 H 0.194 0.806 29 H 0.251 0.749 30 H 0.064 0.936 31 H 0.093 0.907 32 H 0.096 0.904 33 H 0.091 0.909 34 H 0.240 0.760 35 H 0.096 0.904 36 H 0.103 0.897 37 H 0.097 0.903 38 H 0.094 0.906 39 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges -0.285 -1.046 0.392 1.153 hybrid contribution -0.382 -0.721 0.007 0.816 sum -0.668 -1.768 0.399 1.931 Atomic orbital electron populations 1.86556 1.16185 1.82149 1.50571 1.25288 0.86050 1.11549 0.95861 0.93785 0.78269 0.73888 0.85676 1.20586 0.98976 0.92570 0.97682 1.17398 0.99393 0.89244 0.85992 1.91566 1.84488 1.78283 1.56491 1.21322 0.96126 1.02259 0.90131 1.19848 1.06400 0.92599 0.96513 1.18088 0.78423 0.82999 0.86048 1.90859 1.46674 1.66713 1.39564 1.45898 1.63280 1.05445 1.21080 1.21061 0.96750 0.93135 0.84736 0.90966 1.21748 0.98628 0.99849 0.95641 1.22204 1.02340 0.96613 0.97377 1.21808 0.86859 0.90688 0.96155 0.91566 1.86465 1.27439 1.78219 1.46536 1.21547 0.97097 1.01605 0.94858 1.21647 1.02256 0.92743 0.98716 1.17788 0.96157 0.88280 0.85682 1.91612 1.84035 1.77436 1.56871 1.20999 0.99951 1.02079 0.90687 0.75013 0.86872 1.20624 1.21720 0.80614 0.74868 0.93554 0.90736 0.90359 0.90915 0.76014 0.90438 0.89691 0.90323 0.90602 0.80060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.08 12.88 -148.98 -1.92 -0.84 16 2 C -0.08 0.22 2.44 71.24 0.17 0.39 16 3 Si 0.78 -3.76 29.90 68.60 2.05 -1.71 16 4 C -0.10 0.23 5.27 -19.78 -0.10 0.13 16 5 C 0.10 -0.08 7.23 22.33 0.16 0.08 16 6 F -0.13 -0.30 16.73 44.97 0.75 0.45 16 7 C -0.08 0.24 9.52 22.57 0.21 0.45 16 8 C -0.15 -0.23 5.88 -20.06 -0.12 -0.35 16 9 C 0.56 2.96 7.73 86.74 0.67 3.63 16 10 O -0.56 -7.71 15.00 -3.93 -0.06 -7.77 16 11 N -0.71 0.47 5.03 -445.54 -2.24 -1.77 16 12 C 0.15 0.02 2.45 44.99 0.11 0.13 16 13 H 0.07 0.31 7.58 -2.38 -0.02 0.29 16 14 C -0.12 -0.04 5.35 30.59 0.16 0.12 16 15 C -0.15 0.38 5.64 30.60 0.17 0.55 16 16 C 0.10 -0.35 3.77 30.59 0.12 -0.23 16 17 H 0.07 -0.32 8.14 -2.38 -0.02 -0.34 16 18 O -0.58 1.24 11.97 -148.98 -1.78 -0.55 16 19 C -0.11 0.36 5.66 30.58 0.17 0.53 16 20 C -0.12 0.35 5.24 30.58 0.16 0.51 16 21 C 0.14 0.34 7.28 22.67 0.17 0.51 16 22 F -0.12 -0.95 15.55 44.97 0.70 -0.25 16 23 C -0.12 0.38 8.62 22.28 0.19 0.57 16 24 H 0.40 -4.35 8.70 -74.06 -0.64 -4.99 16 25 H 0.11 -0.12 7.89 -2.39 -0.02 -0.14 16 26 H -0.28 -0.05 7.11 99.48 0.71 0.66 16 27 H -0.29 -0.76 7.11 99.48 0.71 -0.05 16 28 H 0.18 -1.57 6.40 -2.91 -0.02 -1.59 16 29 H 0.41 -2.70 6.63 -92.71 -0.62 -3.32 16 30 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 31 H 0.07 -0.01 7.68 -2.39 -0.02 -0.03 16 32 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 33 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 34 H 0.39 -3.35 9.08 -74.06 -0.67 -4.02 16 35 H 0.08 -0.23 8.14 -2.38 -0.02 -0.25 16 36 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 37 H 0.08 -0.19 7.68 -2.39 -0.02 -0.21 16 38 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 39 H 0.18 -1.61 5.10 -2.91 -0.01 -1.62 16 Total: 0.00 -21.03 327.11 -1.01 -22.04 By element: Atomic # 1 Polarization: -15.87 SS G_CDS: -0.76 Total: -16.63 kcal Atomic # 6 Polarization: 4.78 SS G_CDS: 2.25 Total: 7.03 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -2.24 Total: -1.77 kcal Atomic # 8 Polarization: -5.40 SS G_CDS: -3.76 Total: -9.16 kcal Atomic # 9 Polarization: -1.26 SS G_CDS: 1.45 Total: 0.19 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 2.05 Total: -1.71 kcal Total: -21.03 -1.01 -22.04 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12360598.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -160.076 kcal (2) G-P(sol) polarization free energy of solvation -21.029 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.008 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.037 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.113 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds