Wall clock time and date at job start Sat Mar 6 2021 23:53:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86290 * 109.47347 * 2 1 4 4 C 1.50706 * 109.47196 * 239.99552 * 2 1 3 5 5 C 1.37814 * 119.94057 * 255.00245 * 4 2 1 6 6 C 1.39670 * 119.87657 * 179.97438 * 5 4 2 7 7 C 1.47726 * 120.11878 * 179.97438 * 6 5 4 8 8 O 1.21569 * 119.99792 * 0.03246 * 7 6 5 9 9 N 1.34777 * 119.99880 * 180.02562 * 7 6 5 10 10 C 1.46507 * 119.99548 * 180.02562 * 9 7 6 11 11 H 1.09001 * 109.47027 * 35.00746 * 10 9 7 12 12 C 1.53001 * 109.46782 * 155.00261 * 10 9 7 13 13 C 1.53003 * 109.47141 * 60.00170 * 12 10 9 14 14 C 1.52999 * 109.46998 * 59.99553 * 13 12 10 15 15 H 1.09000 * 109.46977 * 60.00320 * 14 13 12 16 16 O 1.42900 * 109.47311 * 179.97438 * 14 13 12 17 17 C 1.53001 * 109.47539 * 300.00203 * 14 13 12 18 18 C 1.52990 * 109.47251 * 275.00606 * 10 9 7 19 19 C 1.39637 * 119.76357 * 0.02562 * 6 5 4 20 20 C 1.37856 * 119.87932 * 359.97438 * 19 6 5 21 21 C 1.38634 * 120.12096 * 0.26107 * 20 19 6 22 22 F 1.35093 * 119.88243 * 179.73969 * 21 20 19 23 23 H 0.96693 * 113.99785 * 60.00354 * 1 2 3 24 24 H 1.09006 * 109.47152 * 120.00295 * 2 1 3 25 25 H 1.48504 * 110.00000 * 298.68060 * 3 2 1 26 26 H 1.48502 * 110.00120 * 59.99599 * 3 2 1 27 27 H 1.07993 * 120.06133 * 0.02562 * 5 4 2 28 28 H 0.96995 * 120.00348 * 0.02562 * 9 7 6 29 29 H 1.09000 * 109.47082 * 180.02562 * 12 10 9 30 30 H 1.09007 * 109.47076 * 300.00453 * 12 10 9 31 31 H 1.08998 * 109.47434 * 180.02562 * 13 12 10 32 32 H 1.09000 * 109.46995 * 299.99885 * 13 12 10 33 33 H 0.96693 * 114.00233 * 180.02562 * 16 14 13 34 34 H 1.08998 * 109.47034 * 179.97438 * 17 14 13 35 35 H 1.09000 * 109.47082 * 300.00054 * 17 14 13 36 36 H 1.08992 * 109.47461 * 59.99991 * 18 10 9 37 37 H 1.09000 * 109.47099 * 180.02562 * 18 10 9 38 38 H 1.07999 * 120.05950 * 180.02562 * 19 6 5 39 39 H 1.08002 * 119.93635 * 179.97438 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7563 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 2.4520 -1.9823 -1.1260 6 6 2.9167 -2.6397 -2.2673 7 6 3.4764 -4.0028 -2.1614 8 8 3.5325 -4.5544 -1.0795 9 7 3.9246 -4.6348 -3.2642 10 6 4.4791 -5.9868 -3.1591 11 1 3.9404 -6.5417 -2.3911 12 6 4.3334 -6.7035 -4.5030 13 6 5.0895 -5.9245 -5.5811 14 6 6.5703 -5.8406 -5.2057 15 1 6.9828 -6.8465 -5.1276 16 8 7.2767 -5.1136 -6.2129 17 6 6.7161 -5.1239 -3.8619 18 6 5.9599 -5.9029 -2.7837 19 6 2.8514 -2.0036 -3.5086 20 6 2.3287 -0.7314 -3.6017 21 6 1.8733 -0.0815 -2.4650 22 9 1.3669 1.1672 -2.5610 23 1 -0.3933 0.4416 -0.7650 24 1 1.7924 -0.5139 0.8900 25 1 1.5880 2.4585 -1.2243 26 1 1.5615 2.4678 1.2084 27 1 2.4999 -2.4698 -0.1636 28 1 3.8801 -4.1945 -4.1273 29 1 4.7455 -7.7096 -4.4248 30 1 3.2783 -6.7631 -4.7704 31 1 4.9853 -6.4348 -6.5386 32 1 4.6769 -4.9186 -5.6592 33 1 8.2236 -5.0214 -6.0403 34 1 7.7710 -5.0646 -3.5943 35 1 6.3035 -4.1180 -3.9399 36 1 6.0637 -5.3923 -1.8264 37 1 6.3725 -6.9088 -2.7060 38 1 3.2090 -2.5077 -4.3943 39 1 2.2782 -0.2384 -4.5613 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:47 Heat of formation + Delta-G solvation = -129.310135 kcal Electronic energy + Delta-G solvation = -24284.180168 eV Core-core repulsion = 20493.781881 eV Total energy + Delta-G solvation = -3790.398288 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -50.48663 -41.69959 -40.39445 -39.21573 -37.77829 -37.04264 -34.33594 -32.88754 -32.08085 -31.98064 -29.76800 -27.02903 -25.21189 -23.93100 -23.60756 -23.25376 -21.81922 -20.35802 -19.39755 -18.91526 -18.35611 -18.06033 -17.85607 -17.17961 -16.81239 -16.77301 -16.27462 -15.95311 -15.64227 -15.59271 -15.15611 -15.11317 -14.77486 -14.70054 -14.27249 -14.06418 -14.01111 -13.71943 -13.44582 -13.39611 -12.99055 -12.95960 -12.37230 -12.35243 -12.32710 -11.87505 -11.36226 -11.25509 -11.10107 -10.88598 -10.83006 -10.23684 -10.17343 -9.87430 -4.95259 -0.56695 -0.07623 1.20899 1.57894 1.63415 1.96690 2.03000 2.52685 2.89678 3.04365 3.18814 3.40343 3.43891 3.47776 3.55153 3.56717 3.79825 3.88415 3.92125 4.02982 4.04941 4.19256 4.25248 4.27460 4.36894 4.46761 4.51541 4.68038 4.68651 4.76865 4.85428 4.90483 4.91831 4.92785 4.98134 5.02994 5.10045 5.18790 5.38582 5.50684 6.27787 6.35856 6.58955 7.10290 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.675 3.325 4 C -0.151 4.151 5 C -0.009 4.009 6 C -0.144 4.144 7 C 0.562 3.438 8 O -0.530 6.530 9 N -0.719 5.719 10 C 0.144 3.856 11 H 0.095 0.905 12 C -0.127 4.127 13 C -0.115 4.115 14 C 0.103 3.897 15 H 0.057 0.943 16 O -0.569 6.569 17 C -0.151 4.151 18 C -0.130 4.130 19 C -0.055 4.055 20 C -0.152 4.152 21 C 0.119 3.881 22 F -0.123 7.123 23 H 0.375 0.625 24 H 0.125 0.875 25 H -0.230 1.230 26 H -0.260 1.260 27 H 0.150 0.850 28 H 0.399 0.601 29 H 0.085 0.915 30 H 0.079 0.921 31 H 0.076 0.924 32 H 0.066 0.934 33 H 0.380 0.620 34 H 0.067 0.933 35 H 0.070 0.930 36 H 0.074 0.926 37 H 0.076 0.924 38 H 0.137 0.863 39 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.638 -1.146 -3.656 5.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.574 3.426 4 C -0.153 4.153 5 C -0.028 4.028 6 C -0.147 4.147 7 C 0.349 3.651 8 O -0.407 6.407 9 N -0.373 5.373 10 C 0.040 3.960 11 H 0.113 0.887 12 C -0.165 4.165 13 C -0.152 4.152 14 C 0.044 3.956 15 H 0.075 0.925 16 O -0.375 6.375 17 C -0.189 4.189 18 C -0.168 4.168 19 C -0.074 4.074 20 C -0.171 4.171 21 C 0.099 3.901 22 F -0.101 7.101 23 H 0.223 0.777 24 H 0.142 0.858 25 H -0.154 1.154 26 H -0.185 1.185 27 H 0.168 0.832 28 H 0.236 0.764 29 H 0.104 0.896 30 H 0.097 0.903 31 H 0.095 0.905 32 H 0.084 0.916 33 H 0.228 0.772 34 H 0.085 0.915 35 H 0.089 0.911 36 H 0.093 0.907 37 H 0.095 0.905 38 H 0.155 0.845 39 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 2.934 -0.960 -2.599 4.036 hybrid contribution -0.571 0.182 -0.768 0.974 sum 2.363 -0.778 -3.367 4.186 Atomic orbital electron populations 1.86657 1.17105 1.79912 1.49269 1.24993 0.84286 1.11454 0.97549 0.95465 0.91454 0.74703 0.80998 1.20270 1.04122 0.96415 0.94469 1.21038 0.91369 0.91309 0.99121 1.20021 1.04876 0.95403 0.94413 1.18110 0.77479 0.85231 0.84274 1.90816 1.55824 1.66949 1.27090 1.46044 1.63328 1.17605 1.10279 1.21026 0.94203 0.82482 0.98337 0.88667 1.21835 1.01530 0.99798 0.93293 1.21482 0.93239 1.01151 0.99350 1.21838 0.92812 0.94241 0.86718 0.92461 1.86504 1.25085 1.77845 1.48056 1.22250 1.00969 1.00491 0.95167 1.21891 0.94397 1.01422 0.99122 1.21182 0.95581 0.93827 0.96820 1.21101 1.01794 0.95923 0.98251 1.17908 0.97365 0.80412 0.94399 1.91577 1.84631 1.37482 1.96419 0.77701 0.85761 1.15403 1.18454 0.83184 0.76396 0.89647 0.90254 0.90492 0.91551 0.77249 0.91458 0.91100 0.90712 0.90530 0.84536 0.83541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.03 12.88 -35.23 -0.45 -1.48 16 2 C -0.07 -0.02 2.81 36.01 0.10 0.08 16 3 Si 0.67 -0.09 30.80 -169.99 -5.24 -5.33 16 4 C -0.15 -0.02 4.78 -104.61 -0.50 -0.52 16 5 C -0.01 0.00 9.21 -39.20 -0.36 -0.37 16 6 C -0.14 0.01 5.87 -104.96 -0.62 -0.61 16 7 C 0.56 0.66 7.73 -12.38 -0.10 0.56 16 8 O -0.53 -2.51 16.01 5.31 0.08 -2.43 16 9 N -0.72 1.05 4.18 -54.79 -0.23 0.82 16 10 C 0.14 -0.22 2.78 -67.93 -0.19 -0.41 16 11 H 0.10 0.00 7.58 -51.93 -0.39 -0.39 16 12 C -0.13 0.39 5.61 -26.73 -0.15 0.24 16 13 C -0.11 0.28 5.40 -26.73 -0.14 0.13 16 14 C 0.10 -0.20 3.47 -26.73 -0.09 -0.29 16 15 H 0.06 -0.13 8.14 -51.93 -0.42 -0.56 16 16 O -0.57 0.35 13.32 -35.23 -0.47 -0.12 16 17 C -0.15 0.31 5.39 -26.73 -0.14 0.17 16 18 C -0.13 0.20 5.60 -26.73 -0.15 0.05 16 19 C -0.06 0.12 9.54 -39.20 -0.37 -0.26 16 20 C -0.15 0.25 10.01 -39.58 -0.40 -0.14 16 21 C 0.12 -0.01 6.63 -39.27 -0.26 -0.27 16 22 F -0.12 -0.11 12.57 2.25 0.03 -0.08 16 23 H 0.38 -0.20 8.44 45.56 0.38 0.18 16 24 H 0.12 -0.10 7.77 -51.93 -0.40 -0.50 16 25 H -0.23 -0.39 5.26 56.52 0.30 -0.09 16 26 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 27 H 0.15 0.09 7.58 -52.49 -0.40 -0.31 16 28 H 0.40 -1.35 4.89 -40.82 -0.20 -1.55 16 29 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 30 H 0.08 -0.26 8.14 -51.92 -0.42 -0.68 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.18 6.51 -51.93 -0.34 -0.52 16 33 H 0.38 -1.54 9.08 45.56 0.41 -1.13 16 34 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.07 -0.10 7.60 -51.93 -0.39 -0.49 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.14 -0.65 6.40 -52.49 -0.34 -0.99 16 39 H 0.15 -0.51 8.06 -52.49 -0.42 -0.93 16 LS Contribution 317.87 15.07 4.79 4.79 Total: 0.00 -7.51 317.87 -9.21 -16.72 By element: Atomic # 1 Polarization: -6.91 SS G_CDS: -4.35 Total: -11.26 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -3.37 Total: -1.63 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -0.23 Total: 0.82 kcal Atomic # 8 Polarization: -3.19 SS G_CDS: -0.84 Total: -4.03 kcal Atomic # 9 Polarization: -0.11 SS G_CDS: 0.03 Total: -0.08 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: -5.24 Total: -5.33 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -7.51 -9.21 -16.72 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.593 kcal (2) G-P(sol) polarization free energy of solvation -7.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.717 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds