Wall clock time and date at job start Sat Mar 6 2021 23:53:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.46896 * 2 1 4 4 C 1.50707 * 109.46920 * 119.99388 * 2 1 3 5 5 C 1.35082 * 126.07403 * 255.18866 * 4 2 1 6 6 N 1.35045 * 107.97756 * 180.23680 * 5 4 2 7 7 C 1.46503 * 125.93188 * 179.74671 * 6 5 4 8 8 C 1.50694 * 109.47119 * 124.97764 * 7 6 5 9 9 O 1.21289 * 119.99925 * 0.02562 * 8 7 6 10 10 N 1.34774 * 120.00274 * 180.02562 * 8 7 6 11 11 C 1.46499 * 120.00225 * 180.02562 * 10 8 7 12 12 H 1.08998 * 109.47117 * 34.99728 * 11 10 8 13 13 C 1.53002 * 109.47314 * 155.00059 * 11 10 8 14 14 C 1.52995 * 109.47169 * 59.99793 * 13 11 10 15 15 C 1.53005 * 109.47219 * 60.00135 * 14 13 11 16 16 H 1.08994 * 109.47039 * 59.99906 * 15 14 13 17 17 O 1.42901 * 109.47410 * 180.02562 * 15 14 13 18 18 C 1.53002 * 109.46940 * 300.00005 * 15 14 13 19 19 C 1.52998 * 109.47043 * 275.00068 * 11 10 8 20 20 N 1.40068 * 108.13735 * 359.75295 * 6 5 4 21 21 C 1.31626 * 108.11169 * 359.97438 * 20 6 5 22 22 C 1.48417 * 126.03959 * 179.97438 * 21 20 6 23 23 C 1.39321 * 120.12186 * 325.02937 * 22 21 20 24 24 C 1.38021 * 119.87753 * 180.30281 * 23 22 21 25 25 C 1.38322 * 120.11874 * 359.41965 * 24 23 22 26 26 C 1.38316 * 120.24015 * 0.60218 * 25 24 23 27 27 C 1.38021 * 120.12179 * 359.68238 * 26 25 24 28 28 H 0.96698 * 114.00623 * 300.00358 * 1 2 3 29 29 H 1.08997 * 109.47599 * 239.99646 * 2 1 3 30 30 H 1.48507 * 109.99948 * 178.67917 * 3 2 1 31 31 H 1.48498 * 109.99760 * 299.99452 * 3 2 1 32 32 H 1.07998 * 126.01645 * 359.97438 * 5 4 2 33 33 H 1.08994 * 109.46945 * 244.97898 * 7 6 5 34 34 H 1.09001 * 109.46798 * 4.98170 * 7 6 5 35 35 H 0.96994 * 119.99791 * 359.97438 * 10 8 7 36 36 H 1.08994 * 109.47173 * 179.97438 * 13 11 10 37 37 H 1.08999 * 109.46921 * 300.00031 * 13 11 10 38 38 H 1.08998 * 109.47734 * 180.02562 * 14 13 11 39 39 H 1.09004 * 109.46961 * 300.00606 * 14 13 11 40 40 H 0.96698 * 114.00136 * 179.97438 * 17 15 14 41 41 H 1.08999 * 109.46921 * 179.97438 * 18 15 14 42 42 H 1.09003 * 109.47153 * 299.99860 * 18 15 14 43 43 H 1.09000 * 109.47167 * 59.99743 * 19 11 10 44 44 H 1.09003 * 109.47208 * 179.97438 * 19 11 10 45 45 H 1.08002 * 120.05673 * 0.02562 * 23 22 21 46 46 H 1.08004 * 119.93579 * 179.72472 * 24 23 22 47 47 H 1.08002 * 119.87443 * 180.28501 * 25 24 23 48 48 H 1.08003 * 119.93498 * 179.70461 * 26 25 24 49 49 H 1.08004 * 120.06125 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4595 -0.1245 2.3272 6 7 2.7911 -1.0989 3.2014 7 6 3.4002 -0.9010 4.5191 8 6 2.5518 -1.5692 5.5701 9 8 1.5384 -2.1537 5.2500 10 7 2.9191 -1.5174 6.8658 11 6 2.0947 -2.1675 7.8875 12 1 1.6603 -3.0794 7.4777 13 6 2.9630 -2.5154 9.0982 14 6 3.5727 -1.2354 9.6733 15 6 2.4528 -0.2863 10.1048 16 1 1.8394 -0.7700 10.8649 17 8 3.0222 0.9095 10.6414 18 6 1.5844 0.0616 8.8941 19 6 0.9748 -1.2185 8.3189 20 7 2.4517 -2.3317 2.6296 21 6 1.9296 -2.1026 1.4433 22 6 1.4334 -3.1303 0.4944 23 6 2.0721 -4.3652 0.4043 24 6 1.6103 -5.3150 -0.4843 25 6 0.5082 -5.0470 -1.2760 26 6 -0.1294 -3.8225 -1.1910 27 6 0.3275 -2.8633 -0.3099 28 1 -0.3934 0.4417 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 3.5346 1.7704 0.0322 31 1 1.5615 2.4678 -1.2086 32 1 2.5969 0.9362 2.4767 33 1 4.3989 -1.3373 4.5269 34 1 3.4681 0.1660 4.7313 35 1 3.7297 -1.0503 7.1217 36 1 2.3495 -2.9987 9.8585 37 1 3.7608 -3.1915 8.7908 38 1 4.1917 -1.4832 10.5355 39 1 4.1860 -0.7517 8.9130 40 1 2.3686 1.5586 10.9357 41 1 0.7864 0.7374 9.2016 42 1 2.1979 0.5453 8.1339 43 1 0.3562 -0.9706 7.4564 44 1 0.3611 -1.7023 9.0788 45 1 2.9298 -4.5773 1.0256 46 1 2.1075 -6.2709 -0.5581 47 1 0.1474 -5.7947 -1.9668 48 1 -0.9866 -3.6167 -1.8149 49 1 -0.1713 -1.9077 -0.2440 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:51 Heat of formation + Delta-G solvation = -6.981130 kcal Electronic energy + Delta-G solvation = -32081.616037 eV Core-core repulsion = 27783.833208 eV Total energy + Delta-G solvation = -4297.782829 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.43546 -41.33743 -39.74150 -39.40358 -37.74103 -37.07526 -34.75949 -34.08943 -32.23262 -32.06891 -31.70569 -31.29765 -30.11115 -28.42466 -25.91784 -24.22417 -23.95552 -23.34033 -23.24279 -22.21712 -21.42662 -20.85737 -20.36100 -18.83156 -18.47492 -18.35427 -17.65515 -17.30302 -16.84573 -16.69668 -16.57909 -16.18523 -15.93129 -15.67077 -15.60476 -15.37858 -15.13840 -14.98317 -14.63763 -14.37492 -14.25619 -14.10379 -14.06257 -13.99140 -13.83296 -13.55999 -13.45821 -13.28950 -12.99217 -12.39614 -12.38315 -12.36144 -12.29334 -11.94847 -11.89394 -11.81384 -11.41084 -11.39003 -11.17028 -10.91444 -10.55202 -10.24896 -10.18000 -9.65365 -9.61076 -9.12880 -5.06830 0.29046 0.72192 0.85193 1.22370 1.36772 1.46624 1.63636 1.91082 2.00362 2.02468 3.01590 3.11944 3.30329 3.42667 3.51964 3.53800 3.56161 3.63711 3.75630 3.84067 3.86824 3.89572 4.01883 4.15973 4.17590 4.22583 4.25734 4.28880 4.34598 4.44000 4.46495 4.50977 4.66180 4.66312 4.79467 4.83882 4.87987 4.89051 4.89810 4.95170 4.96749 5.06960 5.15077 5.18821 5.35930 5.39128 5.47978 5.79163 5.82356 5.85711 5.88477 6.27142 6.30666 6.55908 6.66902 6.73601 7.07487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.027 4.027 3 Si 0.684 3.316 4 C -0.252 4.252 5 C 0.064 3.936 6 N -0.358 5.358 7 C 0.115 3.885 8 C 0.499 3.501 9 O -0.502 6.502 10 N -0.723 5.723 11 C 0.146 3.854 12 H 0.093 0.907 13 C -0.126 4.126 14 C -0.114 4.114 15 C 0.103 3.897 16 H 0.057 0.943 17 O -0.569 6.569 18 C -0.149 4.149 19 C -0.129 4.129 20 N -0.250 5.250 21 C 0.133 3.867 22 C -0.022 4.022 23 C -0.093 4.093 24 C -0.127 4.127 25 C -0.112 4.112 26 C -0.125 4.125 27 C -0.100 4.100 28 H 0.378 0.622 29 H 0.113 0.887 30 H -0.256 1.256 31 H -0.253 1.253 32 H 0.180 0.820 33 H 0.117 0.883 34 H 0.128 0.872 35 H 0.400 0.600 36 H 0.084 0.916 37 H 0.079 0.921 38 H 0.076 0.924 39 H 0.067 0.933 40 H 0.380 0.620 41 H 0.066 0.934 42 H 0.070 0.930 43 H 0.072 0.928 44 H 0.075 0.925 45 H 0.122 0.878 46 H 0.123 0.877 47 H 0.122 0.878 48 H 0.125 0.875 49 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.549 4.437 4.833 6.741 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.139 4.139 3 Si 0.586 3.414 4 C -0.264 4.264 5 C -0.081 4.081 6 N -0.139 5.139 7 C -0.011 4.011 8 C 0.282 3.718 9 O -0.375 6.375 10 N -0.378 5.378 11 C 0.042 3.958 12 H 0.111 0.889 13 C -0.164 4.164 14 C -0.152 4.152 15 C 0.044 3.956 16 H 0.075 0.925 17 O -0.375 6.375 18 C -0.187 4.187 19 C -0.168 4.168 20 N -0.070 5.070 21 C -0.033 4.033 22 C -0.024 4.024 23 C -0.112 4.112 24 C -0.145 4.145 25 C -0.131 4.131 26 C -0.143 4.143 27 C -0.119 4.119 28 H 0.226 0.774 29 H 0.130 0.870 30 H -0.181 1.181 31 H -0.178 1.178 32 H 0.197 0.803 33 H 0.135 0.865 34 H 0.146 0.854 35 H 0.236 0.764 36 H 0.102 0.898 37 H 0.097 0.903 38 H 0.095 0.905 39 H 0.086 0.914 40 H 0.227 0.773 41 H 0.085 0.915 42 H 0.088 0.912 43 H 0.091 0.909 44 H 0.094 0.906 45 H 0.140 0.860 46 H 0.141 0.859 47 H 0.140 0.860 48 H 0.143 0.857 49 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 2.351 3.146 4.511 5.981 hybrid contribution -0.165 0.509 -0.290 0.609 sum 2.185 3.655 4.221 5.996 Atomic orbital electron populations 1.86378 1.17769 1.80988 1.49416 1.24293 0.84485 1.09041 0.96098 0.95288 0.80728 0.77516 0.87866 1.20431 1.13482 0.93285 0.99188 1.22207 1.00317 0.95222 0.90345 1.47840 1.48446 1.04371 1.13253 1.21519 0.97180 1.03466 0.78917 1.20513 0.86611 0.81316 0.83311 1.90840 1.24870 1.41065 1.80737 1.46045 1.28435 1.57337 1.06003 1.20981 0.91054 0.96312 0.87457 0.88883 1.21823 1.00165 0.97489 0.96912 1.21477 0.97521 0.94600 1.01559 1.21839 0.94076 0.85845 0.93854 0.92499 1.86507 1.38148 1.29514 1.83324 1.22238 0.99703 0.98167 0.98600 1.21883 0.97692 0.95746 1.01475 1.77794 1.19082 1.01710 1.08402 1.20631 0.98070 0.92380 0.92219 1.17800 0.96748 0.92047 0.95792 1.21212 0.99682 0.92446 0.97859 1.21076 0.97310 0.99361 0.96797 1.21296 0.95688 0.97159 0.98959 1.21143 1.00339 0.93640 0.99199 1.21944 0.94955 1.01058 0.93895 0.77415 0.86972 1.18103 1.17788 0.80319 0.86535 0.85388 0.76402 0.89752 0.90262 0.90538 0.91401 0.77253 0.91523 0.91161 0.90918 0.90599 0.85983 0.85871 0.86014 0.85727 0.82627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.14 10.10 -35.23 -0.36 -0.50 16 2 C -0.03 -0.01 2.01 36.01 0.07 0.06 16 3 Si 0.68 -0.95 30.74 -169.99 -5.23 -6.18 16 4 C -0.25 -0.47 5.34 -104.75 -0.56 -1.02 16 5 C 0.06 -0.01 9.96 -17.26 -0.17 -0.18 16 6 N -0.36 -0.55 3.40 -62.59 -0.21 -0.76 16 7 C 0.11 -0.27 6.99 -5.19 -0.04 -0.31 16 8 C 0.50 0.14 7.82 -10.99 -0.09 0.05 16 9 O -0.50 -2.75 15.37 5.55 0.09 -2.67 16 10 N -0.72 1.75 4.23 -53.81 -0.23 1.53 16 11 C 0.15 -0.24 2.78 -67.93 -0.19 -0.43 16 12 H 0.09 0.06 7.58 -51.93 -0.39 -0.34 16 13 C -0.13 0.39 5.61 -26.73 -0.15 0.24 16 14 C -0.11 0.31 5.40 -26.73 -0.14 0.16 16 15 C 0.10 -0.22 3.47 -26.73 -0.09 -0.32 16 16 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 17 O -0.57 0.52 13.32 -35.23 -0.47 0.05 16 18 C -0.15 0.38 5.39 -26.73 -0.14 0.24 16 19 C -0.13 0.21 5.60 -26.73 -0.15 0.06 16 20 N -0.25 -1.33 11.63 33.43 0.39 -0.94 16 21 C 0.13 0.63 6.74 -82.78 -0.56 0.08 16 22 C -0.02 -0.11 5.80 -104.90 -0.61 -0.72 16 23 C -0.09 -0.41 9.75 -39.26 -0.38 -0.79 16 24 C -0.13 -0.40 10.03 -39.63 -0.40 -0.79 16 25 C -0.11 -0.30 10.04 -39.52 -0.40 -0.70 16 26 C -0.13 -0.38 10.03 -39.63 -0.40 -0.78 16 27 C -0.10 -0.40 8.94 -39.26 -0.35 -0.75 16 28 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 29 H 0.11 0.19 7.84 -51.93 -0.41 -0.22 16 30 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 31 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 32 H 0.18 -0.83 6.41 -52.49 -0.34 -1.16 16 33 H 0.12 -0.48 8.14 -51.93 -0.42 -0.90 16 34 H 0.13 -0.83 8.07 -51.93 -0.42 -1.25 16 35 H 0.40 -1.94 6.87 -40.82 -0.28 -2.22 16 36 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 37 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 39 H 0.07 -0.21 6.51 -51.93 -0.34 -0.55 16 40 H 0.38 -1.66 9.08 45.56 0.41 -1.25 16 41 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 42 H 0.07 -0.16 7.60 -51.93 -0.39 -0.56 16 43 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 44 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 45 H 0.12 0.50 8.06 -52.49 -0.42 0.07 16 46 H 0.12 0.14 8.06 -52.48 -0.42 -0.29 16 47 H 0.12 0.07 8.06 -52.49 -0.42 -0.36 16 48 H 0.12 0.14 8.06 -52.48 -0.42 -0.28 16 49 H 0.16 0.54 4.53 -52.48 -0.24 0.31 16 LS Contribution 395.25 15.07 5.96 5.96 Total: 0.00 -12.25 395.25 -11.07 -23.32 By element: Atomic # 1 Polarization: -7.63 SS G_CDS: -6.27 Total: -13.89 kcal Atomic # 6 Polarization: -1.17 SS G_CDS: -4.74 Total: -5.91 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.05 Total: -0.18 kcal Atomic # 8 Polarization: -2.38 SS G_CDS: -0.74 Total: -3.12 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.23 Total: -6.18 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -12.25 -11.07 -23.32 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.338 kcal (2) G-P(sol) polarization free energy of solvation -12.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.090 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.319 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.981 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds