Wall clock time and date at job start Sat Mar 6 2021 23:53:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.46896 * 2 1 4 4 C 1.50707 * 109.46920 * 119.99388 * 2 1 3 5 5 C 1.35082 * 126.07403 * 255.18866 * 4 2 1 6 6 N 1.35045 * 107.97756 * 180.23680 * 5 4 2 7 7 C 1.46503 * 125.93188 * 179.74671 * 6 5 4 8 8 C 1.50694 * 109.47119 * 124.97764 * 7 6 5 9 9 O 1.21289 * 119.99925 * 0.02562 * 8 7 6 10 10 N 1.34774 * 120.00274 * 180.02562 * 8 7 6 11 11 C 1.46499 * 120.00225 * 180.02562 * 10 8 7 12 12 H 1.08998 * 109.47117 * 34.99728 * 11 10 8 13 13 C 1.53002 * 109.47314 * 155.00059 * 11 10 8 14 14 C 1.52995 * 109.47169 * 59.99793 * 13 11 10 15 15 C 1.53005 * 109.47219 * 60.00135 * 14 13 11 16 16 H 1.08994 * 109.47039 * 59.99906 * 15 14 13 17 17 O 1.42901 * 109.47410 * 180.02562 * 15 14 13 18 18 C 1.53002 * 109.46940 * 300.00005 * 15 14 13 19 19 C 1.52998 * 109.47043 * 275.00068 * 11 10 8 20 20 N 1.40068 * 108.13735 * 359.75295 * 6 5 4 21 21 C 1.31626 * 108.11169 * 359.97438 * 20 6 5 22 22 C 1.48417 * 126.03959 * 179.97438 * 21 20 6 23 23 C 1.39321 * 120.12186 * 325.02937 * 22 21 20 24 24 C 1.38021 * 119.87753 * 180.30281 * 23 22 21 25 25 C 1.38322 * 120.11874 * 359.41965 * 24 23 22 26 26 C 1.38316 * 120.24015 * 0.60218 * 25 24 23 27 27 C 1.38021 * 120.12179 * 359.68238 * 26 25 24 28 28 H 0.96698 * 114.00623 * 300.00358 * 1 2 3 29 29 H 1.08997 * 109.47599 * 239.99646 * 2 1 3 30 30 H 1.48507 * 109.99948 * 178.67917 * 3 2 1 31 31 H 1.48498 * 109.99760 * 299.99452 * 3 2 1 32 32 H 1.07998 * 126.01645 * 359.97438 * 5 4 2 33 33 H 1.08994 * 109.46945 * 244.97898 * 7 6 5 34 34 H 1.09001 * 109.46798 * 4.98170 * 7 6 5 35 35 H 0.96994 * 119.99791 * 359.97438 * 10 8 7 36 36 H 1.08994 * 109.47173 * 179.97438 * 13 11 10 37 37 H 1.08999 * 109.46921 * 300.00031 * 13 11 10 38 38 H 1.08998 * 109.47734 * 180.02562 * 14 13 11 39 39 H 1.09004 * 109.46961 * 300.00606 * 14 13 11 40 40 H 0.96698 * 114.00136 * 179.97438 * 17 15 14 41 41 H 1.08999 * 109.46921 * 179.97438 * 18 15 14 42 42 H 1.09003 * 109.47153 * 299.99860 * 18 15 14 43 43 H 1.09000 * 109.47167 * 59.99743 * 19 11 10 44 44 H 1.09003 * 109.47208 * 179.97438 * 19 11 10 45 45 H 1.08002 * 120.05673 * 0.02562 * 23 22 21 46 46 H 1.08004 * 119.93579 * 179.72472 * 24 23 22 47 47 H 1.08002 * 119.87443 * 180.28501 * 25 24 23 48 48 H 1.08003 * 119.93498 * 179.70461 * 26 25 24 49 49 H 1.08004 * 120.06125 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4595 -0.1245 2.3272 6 7 2.7911 -1.0989 3.2014 7 6 3.4002 -0.9010 4.5191 8 6 2.5518 -1.5692 5.5701 9 8 1.5384 -2.1537 5.2500 10 7 2.9191 -1.5174 6.8658 11 6 2.0947 -2.1675 7.8875 12 1 1.6603 -3.0794 7.4777 13 6 2.9630 -2.5154 9.0982 14 6 3.5727 -1.2354 9.6733 15 6 2.4528 -0.2863 10.1048 16 1 1.8394 -0.7700 10.8649 17 8 3.0222 0.9095 10.6414 18 6 1.5844 0.0616 8.8941 19 6 0.9748 -1.2185 8.3189 20 7 2.4517 -2.3317 2.6296 21 6 1.9296 -2.1026 1.4433 22 6 1.4334 -3.1303 0.4944 23 6 2.0721 -4.3652 0.4043 24 6 1.6103 -5.3150 -0.4843 25 6 0.5082 -5.0470 -1.2760 26 6 -0.1294 -3.8225 -1.1910 27 6 0.3275 -2.8633 -0.3099 28 1 -0.3934 0.4417 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 3.5346 1.7704 0.0322 31 1 1.5615 2.4678 -1.2086 32 1 2.5969 0.9362 2.4767 33 1 4.3989 -1.3373 4.5269 34 1 3.4681 0.1660 4.7313 35 1 3.7297 -1.0503 7.1217 36 1 2.3495 -2.9987 9.8585 37 1 3.7608 -3.1915 8.7908 38 1 4.1917 -1.4832 10.5355 39 1 4.1860 -0.7517 8.9130 40 1 2.3686 1.5586 10.9357 41 1 0.7864 0.7374 9.2016 42 1 2.1979 0.5453 8.1339 43 1 0.3562 -0.9706 7.4564 44 1 0.3611 -1.7023 9.0788 45 1 2.9298 -4.5773 1.0256 46 1 2.1075 -6.2709 -0.5581 47 1 0.1474 -5.7947 -1.9668 48 1 -0.9866 -3.6167 -1.8149 49 1 -0.1713 -1.9077 -0.2440 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:49 Heat of formation + Delta-G solvation = -11.229558 kcal Electronic energy + Delta-G solvation = -32081.800262 eV Core-core repulsion = 27783.833208 eV Total energy + Delta-G solvation = -4297.967054 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -42.49618 -41.28554 -39.87049 -39.42946 -37.74289 -36.97973 -34.81284 -34.03959 -32.31517 -31.91289 -31.88849 -31.43751 -30.04556 -28.38155 -25.95413 -24.34766 -23.77786 -23.51434 -23.18406 -22.19362 -21.46205 -20.98157 -20.25339 -18.80798 -18.45984 -18.19340 -17.77188 -17.27602 -16.81225 -16.65131 -16.56677 -16.24921 -15.95666 -15.82312 -15.52072 -15.40616 -15.11392 -14.90569 -14.69016 -14.43003 -14.25995 -14.16033 -14.03833 -13.96289 -13.89527 -13.66375 -13.29357 -13.28845 -12.83172 -12.46598 -12.39425 -12.23591 -12.18108 -12.14080 -11.90111 -11.77634 -11.55240 -11.27967 -11.20127 -10.75956 -10.66268 -10.25390 -10.13030 -9.89471 -9.75357 -9.29260 -4.97444 0.05618 0.45517 0.83827 1.29506 1.43227 1.50398 1.65725 1.79199 2.05901 2.11538 2.88590 3.24295 3.36072 3.54912 3.59287 3.66928 3.69873 3.73254 3.94705 4.01012 4.03233 4.04517 4.11051 4.12218 4.16688 4.19832 4.33121 4.35769 4.42257 4.43005 4.49115 4.51576 4.60329 4.61327 4.79483 4.83389 4.85408 4.97630 4.99019 5.03316 5.09320 5.13012 5.16464 5.27142 5.30396 5.31237 5.46475 5.55091 5.60586 5.63211 5.93207 6.04384 6.45697 6.60930 6.86571 6.87255 7.16895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.041 4.041 3 Si 0.803 3.197 4 C -0.270 4.270 5 C 0.079 3.921 6 N -0.359 5.359 7 C 0.108 3.892 8 C 0.497 3.503 9 O -0.563 6.563 10 N -0.707 5.707 11 C 0.147 3.853 12 H 0.065 0.935 13 C -0.117 4.117 14 C -0.113 4.113 15 C 0.103 3.897 16 H 0.058 0.942 17 O -0.586 6.586 18 C -0.140 4.140 19 C -0.124 4.124 20 N -0.296 5.296 21 C 0.107 3.893 22 C -0.039 4.039 23 C -0.113 4.113 24 C -0.132 4.132 25 C -0.118 4.118 26 C -0.131 4.131 27 C -0.113 4.113 28 H 0.393 0.607 29 H 0.090 0.910 30 H -0.281 1.281 31 H -0.301 1.301 32 H 0.229 0.771 33 H 0.138 0.862 34 H 0.180 0.820 35 H 0.415 0.585 36 H 0.088 0.912 37 H 0.083 0.917 38 H 0.072 0.928 39 H 0.076 0.924 40 H 0.393 0.607 41 H 0.070 0.930 42 H 0.072 0.928 43 H 0.049 0.951 44 H 0.078 0.922 45 H 0.115 0.885 46 H 0.141 0.859 47 H 0.146 0.854 48 H 0.143 0.857 49 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.453 6.288 5.693 8.830 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.151 4.151 3 Si 0.707 3.293 4 C -0.281 4.281 5 C -0.066 4.066 6 N -0.140 5.140 7 C -0.016 4.016 8 C 0.282 3.718 9 O -0.440 6.440 10 N -0.362 5.362 11 C 0.042 3.958 12 H 0.083 0.917 13 C -0.154 4.154 14 C -0.150 4.150 15 C 0.044 3.956 16 H 0.076 0.924 17 O -0.394 6.394 18 C -0.178 4.178 19 C -0.163 4.163 20 N -0.117 5.117 21 C -0.058 4.058 22 C -0.041 4.041 23 C -0.132 4.132 24 C -0.150 4.150 25 C -0.136 4.136 26 C -0.149 4.149 27 C -0.132 4.132 28 H 0.243 0.757 29 H 0.108 0.892 30 H -0.208 1.208 31 H -0.229 1.229 32 H 0.245 0.755 33 H 0.155 0.845 34 H 0.197 0.803 35 H 0.254 0.746 36 H 0.106 0.894 37 H 0.101 0.899 38 H 0.091 0.909 39 H 0.094 0.906 40 H 0.243 0.757 41 H 0.089 0.911 42 H 0.091 0.909 43 H 0.068 0.932 44 H 0.097 0.903 45 H 0.133 0.867 46 H 0.159 0.841 47 H 0.164 0.836 48 H 0.161 0.839 49 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 3.267 4.986 5.430 8.063 hybrid contribution -0.460 -0.087 -0.521 0.700 sum 2.807 4.898 4.909 7.482 Atomic orbital electron populations 1.86327 1.17914 1.81535 1.50442 1.24613 0.84624 1.10970 0.94850 0.94012 0.77123 0.73024 0.85110 1.20655 1.14606 0.92304 1.00550 1.22900 0.97940 0.96874 0.88927 1.48132 1.47875 1.03629 1.14382 1.22000 0.96828 1.06422 0.76334 1.21030 0.86010 0.80467 0.84263 1.90826 1.27641 1.43846 1.81684 1.45925 1.28539 1.56486 1.05211 1.20901 0.91559 0.95351 0.88003 0.91692 1.21747 0.99963 0.97600 0.96133 1.21474 0.97427 0.94474 1.01649 1.21852 0.94163 0.85687 0.93867 0.92412 1.86471 1.39342 1.30162 1.83465 1.22151 0.99732 0.97414 0.98476 1.21803 0.97451 0.96395 1.00645 1.77686 1.20559 1.04381 1.09109 1.20862 0.98816 0.93783 0.92349 1.18086 0.97161 0.92571 0.96288 1.21319 1.00074 0.93105 0.98723 1.21348 0.97542 0.99773 0.96324 1.21601 0.95343 0.97554 0.99099 1.21443 1.00811 0.93639 0.99022 1.22077 0.95085 1.01587 0.94409 0.75665 0.89199 1.20800 1.22881 0.75509 0.84479 0.80268 0.74598 0.89365 0.89872 0.90888 0.90587 0.75724 0.91089 0.90914 0.93209 0.90308 0.86659 0.84078 0.83638 0.83938 0.82512 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.79 10.10 -148.98 -1.50 -2.30 16 2 C -0.04 -0.07 2.01 71.24 0.14 0.07 16 3 Si 0.80 -3.00 30.74 68.60 2.11 -0.89 16 4 C -0.27 -1.19 5.34 -19.95 -0.11 -1.30 16 5 C 0.08 -0.12 9.96 83.47 0.83 0.71 16 6 N -0.36 -1.02 3.40 -351.92 -1.20 -2.22 16 7 C 0.11 -0.67 6.99 85.63 0.60 -0.07 16 8 C 0.50 0.40 7.82 87.66 0.69 1.09 16 9 O -0.56 -7.36 15.37 -3.06 -0.05 -7.40 16 10 N -0.71 3.61 4.23 -442.54 -1.87 1.74 16 11 C 0.15 -0.37 2.78 44.99 0.13 -0.24 16 12 H 0.06 0.24 7.58 -2.39 -0.02 0.22 16 13 C -0.12 0.74 5.61 30.59 0.17 0.92 16 14 C -0.11 0.71 5.40 30.59 0.17 0.88 16 15 C 0.10 -0.54 3.47 30.60 0.11 -0.44 16 16 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 17 O -0.59 1.75 13.32 -148.98 -1.98 -0.23 16 18 C -0.14 0.81 5.39 30.60 0.16 0.97 16 19 C -0.12 0.32 5.60 30.59 0.17 0.49 16 20 N -0.30 -3.75 11.63 -48.16 -0.56 -4.31 16 21 C 0.11 1.26 6.74 42.53 0.29 1.55 16 22 C -0.04 -0.50 5.80 -20.04 -0.12 -0.62 16 23 C -0.11 -1.32 9.75 22.48 0.22 -1.10 16 24 C -0.13 -1.02 10.03 22.24 0.22 -0.80 16 25 C -0.12 -0.72 10.04 22.31 0.22 -0.49 16 26 C -0.13 -0.96 10.03 22.24 0.22 -0.74 16 27 C -0.11 -1.17 8.94 22.48 0.20 -0.97 16 28 H 0.39 -2.50 8.70 -74.06 -0.64 -3.14 16 29 H 0.09 0.50 7.84 -2.39 -0.02 0.48 16 30 H -0.28 -0.14 7.11 99.48 0.71 0.57 16 31 H -0.30 -1.25 7.11 99.48 0.71 -0.54 16 32 H 0.23 -2.93 6.41 -2.91 -0.02 -2.95 16 33 H 0.14 -1.39 8.14 -2.39 -0.02 -1.41 16 34 H 0.18 -3.05 8.07 -2.39 -0.02 -3.07 16 35 H 0.42 -4.67 6.87 -92.71 -0.64 -5.30 16 36 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 37 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 38 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 39 H 0.08 -0.61 6.51 -2.38 -0.02 -0.63 16 40 H 0.39 -3.85 9.08 -74.06 -0.67 -4.52 16 41 H 0.07 -0.45 8.14 -2.39 -0.02 -0.47 16 42 H 0.07 -0.44 7.60 -2.39 -0.02 -0.46 16 43 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 44 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 45 H 0.12 1.36 8.06 -2.91 -0.02 1.33 16 46 H 0.14 0.43 8.06 -2.91 -0.02 0.41 16 47 H 0.15 0.10 8.06 -2.91 -0.02 0.08 16 48 H 0.14 0.40 8.06 -2.91 -0.02 0.37 16 49 H 0.16 1.46 4.53 -2.91 -0.01 1.44 16 Total: 0.00 -33.76 395.25 -1.65 -35.41 By element: Atomic # 1 Polarization: -18.79 SS G_CDS: -0.91 Total: -19.70 kcal Atomic # 6 Polarization: -4.41 SS G_CDS: 4.32 Total: -0.10 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: -3.63 Total: -4.78 kcal Atomic # 8 Polarization: -6.40 SS G_CDS: -3.54 Total: -9.93 kcal Atomic # 14 Polarization: -3.00 SS G_CDS: 2.11 Total: -0.89 kcal Total: -33.76 -1.65 -35.41 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.176 kcal (2) G-P(sol) polarization free energy of solvation -33.756 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.580 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.650 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.406 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds