Wall clock time and date at job start Sat Mar 6 2021 23:53:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35893 * 116.99562 * 2 1 4 4 C 1.38821 * 119.93561 * 180.02562 * 3 2 1 5 5 C 1.37916 * 120.06409 * 180.02562 * 4 3 2 6 6 C 1.39357 * 119.93678 * 359.97438 * 5 4 3 7 7 C 1.48407 * 120.06258 * 179.97438 * 6 5 4 8 8 N 1.31628 * 126.04013 * 324.97399 * 7 6 5 9 9 N 1.40073 * 108.10859 * 180.02562 * 8 7 6 10 10 C 1.46493 * 125.92643 * 179.97438 * 9 8 7 11 11 C 1.50706 * 109.47433 * 305.02528 * 10 9 8 12 12 O 1.21274 * 119.99688 * 0.02562 * 11 10 9 13 13 N 1.34775 * 119.99887 * 180.02562 * 11 10 9 14 14 C 1.46506 * 119.99693 * 180.02562 * 13 11 10 15 15 H 1.09004 * 109.47073 * 324.99560 * 14 13 11 16 16 C 1.52997 * 109.47289 * 84.99802 * 14 13 11 17 17 C 1.52996 * 109.47131 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.46969 * 299.99938 * 17 16 14 19 19 H 1.09002 * 109.47067 * 180.02562 * 18 17 16 20 20 O 1.42898 * 109.46791 * 300.00018 * 18 17 16 21 21 C 1.52997 * 109.47143 * 60.00070 * 18 17 16 22 22 C 1.52996 * 109.47131 * 299.99831 * 21 18 17 23 23 C 1.35037 * 108.14160 * 0.26417 * 9 8 7 24 24 C 1.35091 * 107.97734 * 359.56984 * 23 9 8 25 25 C 1.50702 * 126.07323 * 180.12457 * 24 23 9 26 26 O 1.42894 * 109.47483 * 255.35523 * 25 24 23 27 27 Si 1.86300 * 109.47177 * 15.35965 * 25 24 23 28 28 C 1.39346 * 119.87027 * 0.24968 * 6 5 4 29 29 C 1.37921 * 119.93910 * 359.51842 * 28 6 5 30 30 H 1.08997 * 109.47242 * 299.99426 * 1 2 3 31 31 H 1.08998 * 109.47541 * 60.00374 * 1 2 3 32 32 H 1.09004 * 109.46964 * 180.02562 * 1 2 3 33 33 H 1.07999 * 119.96724 * 359.97438 * 4 3 2 34 34 H 1.08003 * 120.03337 * 179.97438 * 5 4 3 35 35 H 1.08999 * 109.47106 * 185.02913 * 10 9 8 36 36 H 1.08994 * 109.47472 * 65.02506 * 10 9 8 37 37 H 0.97000 * 120.00190 * 359.97438 * 13 11 10 38 38 H 1.09001 * 109.46832 * 299.99854 * 16 14 13 39 39 H 1.08996 * 109.46952 * 59.99873 * 16 14 13 40 40 H 1.09004 * 109.47552 * 179.97438 * 17 16 14 41 41 H 1.09004 * 109.47298 * 59.99717 * 17 16 14 42 42 H 0.96701 * 113.99881 * 299.99664 * 20 18 17 43 43 H 1.09001 * 109.46832 * 180.02562 * 21 18 17 44 44 H 1.08992 * 109.47303 * 60.00452 * 21 18 17 45 45 H 1.09004 * 109.47298 * 300.00283 * 22 21 18 46 46 H 1.09004 * 109.47552 * 180.02562 * 22 21 18 47 47 H 1.08000 * 126.00632 * 179.74306 * 23 9 8 48 48 H 1.08997 * 109.46904 * 135.35513 * 25 24 23 49 49 H 0.96702 * 114.00231 * 60.00121 * 26 25 24 50 50 H 1.48495 * 110.00082 * 179.97438 * 27 25 24 51 51 H 1.48508 * 109.99581 * 301.31618 * 27 25 24 52 52 H 1.08002 * 120.03000 * 179.72408 * 28 6 5 53 53 H 1.07998 * 119.97082 * 180.22582 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2109 0.0000 4 6 3.4322 1.2821 -0.0005 5 6 4.0610 2.5095 0.0000 6 6 3.3032 3.6791 0.0005 7 6 3.9770 5.0014 0.0017 8 7 5.1049 5.2954 0.6132 9 7 5.3950 6.6435 0.3672 10 6 6.5619 7.3762 0.8646 11 6 6.6285 7.2559 2.3653 12 8 5.7845 6.6203 2.9607 13 7 7.6259 7.8548 3.0458 14 6 7.6909 7.7374 4.5047 15 1 6.6805 7.7238 4.9135 16 6 8.4105 6.4405 4.8804 17 6 8.4778 6.3176 6.4040 18 6 9.2439 7.5109 6.9785 19 1 9.2922 7.4232 8.0639 20 8 10.5686 7.5289 6.4431 21 6 8.5242 8.8078 6.6028 22 6 8.4570 8.9307 5.0792 23 6 4.4091 7.1520 -0.4027 24 6 3.5221 6.1638 -0.6509 25 6 2.2653 6.2854 -1.4736 26 8 1.1303 6.3265 -0.6064 27 14 2.3327 7.8499 -2.4829 28 6 1.9118 3.6045 0.0058 29 6 1.2884 2.3742 0.0004 30 1 -0.3633 0.5137 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 -0.3633 -1.0277 0.0005 33 1 4.0189 0.3754 -0.0005 34 1 5.1396 2.5644 0.0000 35 1 6.4762 8.4270 0.5878 36 1 7.4678 6.9577 0.4261 37 1 8.3011 8.3629 2.5695 38 1 7.8645 5.5904 4.4715 39 1 9.4208 6.4541 4.4717 40 1 8.9901 5.3935 6.6717 41 1 7.4673 6.3039 6.8124 42 1 11.0844 6.7357 6.6429 43 1 9.0703 9.6579 7.0117 44 1 7.5138 8.7941 7.0112 45 1 9.4675 8.9444 4.6708 46 1 7.9447 9.8548 4.8114 47 1 4.3429 8.1692 -0.7597 48 1 2.1827 5.4267 -2.1398 49 1 1.1370 7.0670 0.0154 50 1 1.0992 7.9812 -3.2992 51 1 2.4775 9.0259 -1.5876 52 1 1.3220 4.5093 0.0107 53 1 0.2100 2.3158 0.0008 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12622750.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:53 Heat of formation + Delta-G solvation = -47.405683 kcal Electronic energy + Delta-G solvation = -36187.896240 eV Core-core repulsion = 31414.140660 eV Total energy + Delta-G solvation = -4773.755580 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.188 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -42.48487 -41.19020 -40.94003 -39.68375 -38.47806 -37.82042 -36.70513 -34.70590 -34.21303 -32.24734 -32.03352 -31.87188 -31.22660 -30.01686 -28.62023 -27.86897 -25.87614 -24.14226 -23.84166 -23.68626 -23.10332 -21.73377 -21.48823 -21.12199 -20.74746 -19.17397 -18.80407 -18.35169 -17.77478 -17.55102 -17.25856 -17.03358 -16.71032 -16.67278 -16.64159 -16.29190 -16.06075 -15.67531 -15.59432 -15.38116 -15.24713 -14.90924 -14.61076 -14.57655 -14.43344 -14.17792 -14.04133 -13.86872 -13.69970 -13.61799 -13.28848 -13.21166 -13.08058 -13.02112 -12.80780 -12.50015 -12.47698 -12.20088 -12.14012 -12.09336 -11.65838 -11.64476 -11.54556 -11.31843 -11.20945 -10.75934 -10.45521 -10.39196 -10.13853 -10.04434 -9.64382 -8.94971 -4.82044 0.05901 0.33813 0.83195 1.31658 1.44471 1.48179 1.66840 1.70483 2.06050 2.09407 2.30911 2.78829 3.33726 3.38625 3.45730 3.54054 3.67534 3.71064 3.73924 3.87817 3.90046 3.94732 3.96526 4.03094 4.14520 4.17707 4.21600 4.25101 4.34908 4.34973 4.36567 4.40959 4.43961 4.46919 4.55012 4.58732 4.61398 4.70328 4.77493 4.85100 4.90849 4.93342 5.00824 5.06416 5.08305 5.10274 5.10906 5.22256 5.31845 5.32445 5.46286 5.53280 5.57900 5.70783 5.93741 6.36578 6.46646 6.58572 6.64725 6.86316 7.16295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.124 3.876 4 C -0.167 4.167 5 C -0.060 4.060 6 C -0.070 4.070 7 C 0.117 3.883 8 N -0.295 5.295 9 N -0.359 5.359 10 C 0.110 3.890 11 C 0.494 3.506 12 O -0.566 6.566 13 N -0.710 5.710 14 C 0.151 3.849 15 H 0.060 0.940 16 C -0.118 4.118 17 C -0.149 4.149 18 C 0.106 3.894 19 H 0.065 0.935 20 O -0.577 6.577 21 C -0.114 4.114 22 C -0.112 4.112 23 C 0.075 3.925 24 C -0.262 4.262 25 C -0.051 4.051 26 O -0.547 6.547 27 Si 0.783 3.217 28 C -0.066 4.066 29 C -0.213 4.213 30 H 0.062 0.938 31 H 0.066 0.934 32 H 0.119 0.881 33 H 0.141 0.859 34 H 0.131 0.869 35 H 0.178 0.822 36 H 0.143 0.857 37 H 0.419 0.581 38 H 0.036 0.964 39 H 0.075 0.925 40 H 0.074 0.926 41 H 0.066 0.934 42 H 0.390 0.610 43 H 0.079 0.921 44 H 0.080 0.920 45 H 0.080 0.920 46 H 0.078 0.922 47 H 0.218 0.782 48 H 0.107 0.893 49 H 0.384 0.616 50 H -0.305 1.305 51 H -0.263 1.263 52 H 0.159 0.841 53 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.534 6.692 -2.057 8.341 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.078 3.922 4 C -0.186 4.186 5 C -0.079 4.079 6 C -0.072 4.072 7 C -0.048 4.048 8 N -0.116 5.116 9 N -0.140 5.140 10 C -0.013 4.013 11 C 0.280 3.720 12 O -0.443 6.443 13 N -0.363 5.363 14 C 0.047 3.953 15 H 0.078 0.922 16 C -0.157 4.157 17 C -0.187 4.187 18 C 0.047 3.953 19 H 0.083 0.917 20 O -0.384 6.384 21 C -0.152 4.152 22 C -0.150 4.150 23 C -0.071 4.071 24 C -0.274 4.274 25 C -0.159 4.159 26 O -0.355 6.355 27 Si 0.686 3.314 28 C -0.085 4.085 29 C -0.231 4.231 30 H 0.081 0.919 31 H 0.085 0.915 32 H 0.137 0.863 33 H 0.159 0.841 34 H 0.149 0.851 35 H 0.195 0.805 36 H 0.161 0.839 37 H 0.257 0.743 38 H 0.055 0.945 39 H 0.094 0.906 40 H 0.093 0.907 41 H 0.085 0.915 42 H 0.240 0.760 43 H 0.098 0.902 44 H 0.099 0.901 45 H 0.099 0.901 46 H 0.097 0.903 47 H 0.234 0.766 48 H 0.124 0.876 49 H 0.234 0.766 50 H -0.234 1.234 51 H -0.189 1.189 52 H 0.176 0.824 53 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 4.405 6.540 -1.551 8.036 hybrid contribution -1.045 -0.439 0.970 1.491 sum 3.360 6.102 -0.581 6.990 Atomic orbital electron populations 1.23351 0.76433 1.05611 1.02283 1.86050 1.23478 1.26828 1.88394 1.19337 0.92611 0.84725 0.95518 1.20506 0.91767 0.98803 1.07479 1.21076 1.00047 0.90736 0.96041 1.17889 0.92963 0.89546 1.06840 1.20720 0.93285 0.94150 0.96625 1.77702 1.17603 0.94035 1.22306 1.48108 1.19595 1.07247 1.39091 1.21984 0.88369 1.00618 0.90353 1.21161 0.81326 0.78769 0.90780 1.90816 1.41054 1.41422 1.71008 1.45875 1.28867 1.53956 1.07648 1.20888 0.99173 0.95660 0.79620 0.92155 1.21715 1.00851 0.96776 0.96325 1.22207 1.01600 0.99482 0.95411 1.21778 0.82419 0.94591 0.96537 0.91740 1.86456 1.25533 1.46648 1.79804 1.21556 1.00643 0.97147 0.95875 1.21626 1.01056 0.96543 0.95741 1.22835 0.88447 1.00704 0.95096 1.20533 1.02509 0.93031 1.11313 1.24607 0.81752 1.14051 0.95521 1.86434 1.43962 1.53069 1.52040 0.94009 0.85172 0.72243 0.79985 1.21779 0.93404 0.99121 0.94164 1.21401 1.01092 0.91589 1.09054 0.91911 0.91538 0.86316 0.84126 0.85096 0.80476 0.83930 0.74285 0.94525 0.90597 0.90705 0.91517 0.76027 0.90246 0.90117 0.90108 0.90341 0.76614 0.87551 0.76638 1.23356 1.18878 0.82383 0.83457 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 113.37 1.11 1.12 16 2 O -0.33 -2.85 10.49 -92.34 -0.97 -3.81 16 3 C 0.12 1.24 6.69 22.55 0.15 1.39 16 4 C -0.17 -1.69 9.97 22.33 0.22 -1.47 16 5 C -0.06 -0.66 9.74 22.46 0.22 -0.44 16 6 C -0.07 -0.82 5.80 -20.03 -0.12 -0.93 16 7 C 0.12 1.26 6.73 42.53 0.29 1.54 16 8 N -0.29 -3.53 11.63 -48.16 -0.56 -4.09 16 9 N -0.36 -1.03 3.40 -351.92 -1.20 -2.23 16 10 C 0.11 -0.66 6.99 85.64 0.60 -0.06 16 11 C 0.49 1.05 7.82 87.66 0.69 1.73 16 12 O -0.57 -8.26 15.36 -3.01 -0.05 -8.31 16 13 N -0.71 2.53 5.08 -442.52 -2.25 0.28 16 14 C 0.15 0.01 2.45 44.99 0.11 0.12 16 15 H 0.06 0.34 7.58 -2.38 -0.02 0.32 16 16 C -0.12 -0.21 5.35 30.59 0.16 -0.04 16 17 C -0.15 0.09 5.64 30.59 0.17 0.27 16 18 C 0.11 -0.25 3.77 30.59 0.12 -0.14 16 19 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 20 O -0.58 1.02 11.97 -148.98 -1.78 -0.77 16 21 C -0.11 0.33 5.66 30.59 0.17 0.50 16 22 C -0.11 0.42 5.25 30.59 0.16 0.58 16 23 C 0.07 -0.08 9.96 83.47 0.83 0.75 16 24 C -0.26 -1.00 5.33 -19.95 -0.11 -1.11 16 25 C -0.05 -0.05 2.00 71.24 0.14 0.09 16 26 O -0.55 -1.67 10.10 -148.98 -1.50 -3.17 16 27 Si 0.78 -3.11 30.82 68.60 2.11 -1.00 16 28 C -0.07 -0.65 8.93 22.46 0.20 -0.45 16 29 C -0.21 -1.77 9.02 22.33 0.20 -1.56 16 30 H 0.06 -0.05 7.65 -2.39 -0.02 -0.07 16 31 H 0.07 -0.09 7.66 -2.39 -0.02 -0.11 16 32 H 0.12 -0.41 8.14 -2.38 -0.02 -0.43 16 33 H 0.14 1.01 8.06 -2.91 -0.02 0.99 16 34 H 0.13 1.28 8.06 -2.91 -0.02 1.26 16 35 H 0.18 -2.91 8.07 -2.39 -0.02 -2.93 16 36 H 0.14 -1.51 8.14 -2.39 -0.02 -1.53 16 37 H 0.42 -4.65 8.60 -92.71 -0.80 -5.45 16 38 H 0.04 0.29 8.14 -2.39 -0.02 0.28 16 39 H 0.08 0.05 7.68 -2.39 -0.02 0.04 16 40 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 41 H 0.07 0.07 8.14 -2.38 -0.02 0.05 16 42 H 0.39 -3.11 9.08 -74.06 -0.67 -3.78 16 43 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 44 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 45 H 0.08 -0.28 7.68 -2.38 -0.02 -0.30 16 46 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 47 H 0.22 -2.22 6.33 -2.91 -0.02 -2.24 16 48 H 0.11 0.24 7.84 -2.39 -0.02 0.22 16 49 H 0.38 -0.84 8.70 -74.06 -0.64 -1.48 16 50 H -0.31 -1.34 7.11 99.48 0.71 -0.63 16 51 H -0.26 0.89 6.99 99.48 0.70 1.58 16 52 H 0.16 1.41 4.51 -2.91 -0.01 1.39 16 53 H 0.15 0.54 6.28 -2.91 -0.02 0.52 16 Total: 0.00 -32.95 426.94 -1.98 -34.93 By element: Atomic # 1 Polarization: -12.61 SS G_CDS: -1.11 Total: -13.72 kcal Atomic # 6 Polarization: -3.44 SS G_CDS: 5.32 Total: 1.88 kcal Atomic # 7 Polarization: -2.03 SS G_CDS: -4.00 Total: -6.04 kcal Atomic # 8 Polarization: -11.76 SS G_CDS: -4.30 Total: -16.06 kcal Atomic # 14 Polarization: -3.11 SS G_CDS: 2.11 Total: -1.00 kcal Total: -32.95 -1.98 -34.93 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12622750.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.474 kcal (2) G-P(sol) polarization free energy of solvation -32.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.424 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.982 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.406 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds