Wall clock time and date at job start Sat Mar 6 2021 23:53:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.47253 * 2 1 4 4 C 1.50700 * 109.47035 * 120.00293 * 2 1 3 5 5 C 1.34832 * 125.65683 * 64.99755 * 4 2 1 6 6 C 1.40796 * 107.05063 * 179.97438 * 5 4 2 7 7 C 1.36100 * 106.73561 * 0.02562 * 6 5 4 8 8 C 1.47566 * 125.94833 * 179.97438 * 7 6 5 9 9 C 1.39926 * 119.95211 * 0.02562 * 8 7 6 10 10 C 1.36429 * 120.27554 * 179.69275 * 9 8 7 11 11 C 1.39872 * 120.18490 * 0.56474 * 10 9 8 12 12 C 1.47296 * 120.04421 * 179.71134 * 11 10 9 13 13 O 1.21626 * 120.00097 * 179.72532 * 12 11 10 14 14 N 1.34776 * 120.00168 * 359.73123 * 12 11 10 15 15 C 1.46496 * 120.00390 * 180.02562 * 14 12 11 16 16 H 1.09004 * 109.47374 * 34.99626 * 15 14 12 17 17 C 1.53000 * 109.47631 * 154.99604 * 15 14 12 18 18 C 1.52997 * 109.47060 * 59.99933 * 17 15 14 19 19 C 1.52999 * 109.47317 * 59.99960 * 18 17 15 20 20 H 1.09002 * 109.46716 * 60.00091 * 19 18 17 21 21 O 1.42900 * 109.47616 * 179.97438 * 19 18 17 22 22 C 1.53005 * 109.47159 * 300.00546 * 19 18 17 23 23 C 1.52997 * 109.47452 * 59.99536 * 22 19 18 24 24 C 1.40400 * 119.91190 * 359.44052 * 11 10 9 25 25 O 1.35676 * 120.14183 * 180.25094 * 24 11 10 26 26 C 1.38280 * 119.72285 * 0.27216 * 24 11 10 27 27 O 1.34240 * 125.65057 * 245.30314 * 4 2 1 28 28 H 0.96699 * 114.00059 * 59.99883 * 1 2 3 29 29 H 1.09004 * 109.46709 * 239.99706 * 2 1 3 30 30 H 1.48504 * 109.99999 * 60.00129 * 3 2 1 31 31 H 1.48496 * 109.99760 * 181.32146 * 3 2 1 32 32 H 1.08000 * 126.47499 * 0.03726 * 5 4 2 33 33 H 1.08000 * 126.63135 * 179.97438 * 6 5 4 34 34 H 1.07999 * 119.86537 * 359.97438 * 9 8 7 35 35 H 1.08004 * 119.90639 * 180.30613 * 10 9 8 36 36 H 0.97001 * 120.00215 * 359.97438 * 14 12 11 37 37 H 1.09002 * 109.47398 * 180.02562 * 17 15 14 38 38 H 1.09001 * 109.47194 * 300.00282 * 17 15 14 39 39 H 1.08996 * 109.47853 * 180.02562 * 18 17 15 40 40 H 1.09002 * 109.47153 * 300.00319 * 18 17 15 41 41 H 0.96700 * 113.99696 * 300.00309 * 21 19 18 42 42 H 1.09002 * 109.46935 * 299.99411 * 22 19 18 43 43 H 1.09001 * 109.46812 * 179.97438 * 22 19 18 44 44 H 1.08993 * 109.47194 * 179.97438 * 23 22 19 45 45 H 1.09002 * 109.46695 * 59.99734 * 23 22 19 46 46 H 0.96698 * 113.99644 * 89.99662 * 25 24 11 47 47 H 1.08004 * 120.09493 * 180.02562 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7568 -2.0180 1.5093 6 6 2.3811 -2.2630 2.7473 7 6 2.9081 -1.0786 3.1617 8 6 3.6571 -0.8542 4.4131 9 6 3.8785 -1.9178 5.2950 10 6 4.5756 -1.7192 6.4509 11 6 5.0638 -0.4474 6.7680 12 6 5.8105 -0.2351 8.0198 13 8 6.2390 0.8700 8.2924 14 7 6.0190 -1.2655 8.8631 15 6 6.7611 -1.0543 10.1084 16 1 6.5374 -0.0624 10.5010 17 6 6.3496 -2.1132 11.1334 18 6 6.6637 -3.5055 10.5824 19 6 8.1645 -3.6184 10.3070 20 1 8.7167 -3.4612 11.2336 21 8 8.4580 -4.9191 9.7930 22 6 8.5761 -2.5595 9.2821 23 6 8.2620 -1.1672 9.8331 24 6 4.8462 0.6254 5.8888 25 8 5.3221 1.8599 6.1893 26 6 4.1443 0.4186 4.7155 27 8 2.6218 -0.1451 2.2333 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5616 2.4679 1.2085 31 1 3.5346 1.7702 -0.0322 32 1 1.2372 -2.7411 0.8981 33 1 2.4312 -3.2079 3.2679 34 1 3.5000 -2.9010 5.0576 35 1 4.7473 -2.5454 7.1249 36 1 5.6770 -2.1469 8.6460 37 1 6.9015 -1.9557 12.0601 38 1 5.2804 -2.0328 11.3295 39 1 6.3702 -4.2599 11.3123 40 1 6.1115 -3.6627 9.6558 41 1 8.2227 -5.6409 10.3918 42 1 8.0238 -2.7167 8.3556 43 1 9.6453 -2.6397 9.0863 44 1 8.5556 -0.4129 9.1032 45 1 8.8142 -1.0101 10.7597 46 1 6.2150 2.0284 5.8586 47 1 3.9737 1.2395 4.0346 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:58 Heat of formation + Delta-G solvation = -111.212578 kcal Electronic energy + Delta-G solvation = -31937.494893 eV Core-core repulsion = 27439.754925 eV Total energy + Delta-G solvation = -4497.739967 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.76063 -41.73987 -40.55438 -39.09136 -38.05746 -37.82042 -36.93899 -34.48124 -34.13943 -33.19107 -32.01866 -31.38748 -30.71721 -29.62936 -27.00983 -24.61127 -24.10041 -23.90653 -23.31524 -22.53075 -22.08661 -21.36935 -20.26140 -19.71175 -18.87930 -18.75747 -18.32890 -18.00404 -17.28701 -17.06521 -16.76875 -16.56844 -16.33370 -16.13276 -15.89587 -15.83986 -15.54921 -15.13373 -14.88301 -14.74621 -14.51161 -14.29177 -14.13114 -14.09266 -13.94076 -13.87327 -13.59993 -13.51353 -13.42071 -12.97520 -12.77797 -12.70833 -12.41405 -12.20142 -12.09681 -11.86849 -11.75003 -11.36438 -11.14517 -10.90246 -10.76104 -10.72005 -10.50697 -10.07160 -9.97698 -9.02740 -5.13963 -0.80177 0.08897 0.62500 1.09228 1.36615 1.54024 1.63814 1.98588 1.99106 2.07633 2.62923 2.98160 3.08587 3.20266 3.47292 3.49026 3.56492 3.57843 3.63771 3.74892 3.87854 3.88500 3.92145 4.01194 4.03637 4.10625 4.20066 4.25649 4.30441 4.33985 4.37421 4.47936 4.55505 4.65031 4.72197 4.74906 4.80362 4.86330 4.91749 4.93402 4.97900 5.06864 5.08809 5.14950 5.17931 5.19804 5.36680 5.43431 5.48461 5.95636 6.41702 6.45298 6.60576 6.66958 7.23052 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.706 3.294 4 C -0.003 4.003 5 C -0.168 4.168 6 C -0.175 4.175 7 C 0.022 3.978 8 C 0.031 3.969 9 C -0.115 4.115 10 C -0.064 4.064 11 C -0.165 4.165 12 C 0.560 3.440 13 O -0.517 6.517 14 N -0.721 5.721 15 C 0.144 3.856 16 H 0.095 0.905 17 C -0.127 4.127 18 C -0.154 4.154 19 C 0.103 3.897 20 H 0.057 0.943 21 O -0.568 6.568 22 C -0.112 4.112 23 C -0.129 4.129 24 C 0.179 3.821 25 O -0.474 6.474 26 C -0.142 4.142 27 O -0.169 6.169 28 H 0.391 0.609 29 H 0.096 0.904 30 H -0.248 1.248 31 H -0.252 1.252 32 H 0.158 0.842 33 H 0.159 0.841 34 H 0.140 0.860 35 H 0.136 0.864 36 H 0.397 0.603 37 H 0.084 0.916 38 H 0.075 0.925 39 H 0.071 0.929 40 H 0.067 0.933 41 H 0.379 0.621 42 H 0.069 0.931 43 H 0.071 0.929 44 H 0.076 0.924 45 H 0.076 0.924 46 H 0.399 0.601 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.859 -3.946 -2.638 4.824 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.145 4.145 3 Si 0.605 3.395 4 C -0.052 4.052 5 C -0.187 4.187 6 C -0.194 4.194 7 C -0.028 4.028 8 C 0.030 3.970 9 C -0.133 4.133 10 C -0.082 4.082 11 C -0.168 4.168 12 C 0.347 3.653 13 O -0.393 6.393 14 N -0.376 5.376 15 C 0.040 3.960 16 H 0.113 0.887 17 C -0.165 4.165 18 C -0.192 4.192 19 C 0.044 3.956 20 H 0.075 0.925 21 O -0.374 6.374 22 C -0.149 4.149 23 C -0.167 4.167 24 C 0.132 3.868 25 O -0.285 6.285 26 C -0.161 4.161 27 O -0.067 6.067 28 H 0.240 0.760 29 H 0.114 0.886 30 H -0.172 1.172 31 H -0.177 1.177 32 H 0.176 0.824 33 H 0.176 0.824 34 H 0.157 0.843 35 H 0.153 0.847 36 H 0.234 0.766 37 H 0.102 0.898 38 H 0.094 0.906 39 H 0.090 0.910 40 H 0.086 0.914 41 H 0.226 0.774 42 H 0.087 0.913 43 H 0.090 0.910 44 H 0.095 0.905 45 H 0.095 0.905 46 H 0.257 0.743 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.199 -2.110 -1.652 2.687 hybrid contribution -0.079 -1.642 0.298 1.671 sum -0.278 -3.752 -1.354 3.998 Atomic orbital electron populations 1.86468 1.16311 1.81990 1.50265 1.23798 0.86199 1.11706 0.92819 0.95282 0.80988 0.76219 0.87024 1.21467 1.00294 0.92628 0.90857 1.21552 1.03528 0.95665 0.97949 1.21910 1.01773 0.98367 0.97348 1.20350 1.04010 0.87516 0.90883 1.17759 0.95503 0.93766 0.89979 1.20700 1.00126 0.98709 0.93759 1.20810 0.95505 0.95493 0.96433 1.20496 1.04653 0.94227 0.97460 1.17951 0.79605 0.84516 0.83237 1.90842 1.50075 1.23466 1.74958 1.46040 1.57502 1.12114 1.21904 1.20993 0.91041 1.00251 0.83695 0.88746 1.21804 1.02605 0.93548 0.98498 1.22292 0.97415 0.97684 1.01768 1.21848 0.93639 0.83458 0.96607 0.92456 1.86536 1.86955 1.15572 1.48321 1.21447 1.02243 0.92743 0.98502 1.21909 0.95569 0.96789 1.02468 1.18257 0.93873 0.84150 0.90470 1.84773 1.36348 1.27560 1.79820 1.21570 1.00458 0.97036 0.97030 1.83963 1.58247 1.37947 1.26506 0.76009 0.88601 1.17224 1.17664 0.82447 0.82357 0.84252 0.84669 0.76587 0.89789 0.90616 0.90993 0.91420 0.77397 0.91264 0.91041 0.90507 0.90494 0.74280 0.84221 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.18 12.86 -35.23 -0.45 -0.28 16 2 C -0.04 0.01 2.97 36.01 0.11 0.12 16 3 Si 0.71 -0.50 32.11 -169.99 -5.46 -5.96 16 4 C 0.00 -0.01 6.24 -35.52 -0.22 -0.23 16 5 C -0.17 -0.35 10.78 -39.82 -0.43 -0.78 16 6 C -0.18 -0.29 10.25 -39.38 -0.40 -0.69 16 7 C 0.02 0.07 7.02 -36.55 -0.26 -0.19 16 8 C 0.03 0.07 5.87 -104.95 -0.62 -0.55 16 9 C -0.11 0.02 9.48 -39.60 -0.38 -0.36 16 10 C -0.06 0.03 9.47 -39.62 -0.38 -0.34 16 11 C -0.16 -0.34 5.89 -104.79 -0.62 -0.96 16 12 C 0.56 1.63 7.72 -12.58 -0.10 1.53 16 13 O -0.52 -3.25 14.80 -16.70 -0.25 -3.50 16 14 N -0.72 0.08 4.18 -54.92 -0.23 -0.15 16 15 C 0.14 -0.06 2.78 -67.93 -0.19 -0.25 16 16 H 0.09 0.12 7.58 -51.93 -0.39 -0.28 16 17 C -0.13 0.31 5.61 -26.73 -0.15 0.16 16 18 C -0.15 0.42 5.37 -26.73 -0.14 0.27 16 19 C 0.10 -0.13 3.47 -26.73 -0.09 -0.22 16 20 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 21 O -0.57 0.00 13.32 -35.23 -0.47 -0.47 16 22 C -0.11 0.02 5.42 -26.73 -0.14 -0.12 16 23 C -0.13 0.05 5.60 -26.73 -0.15 -0.10 16 24 C 0.18 0.56 6.71 -38.75 -0.26 0.30 16 25 O -0.47 -1.75 11.56 -40.68 -0.47 -2.22 16 26 C -0.14 -0.40 9.65 -39.06 -0.38 -0.78 16 27 O -0.17 -0.75 8.79 4.70 0.04 -0.71 16 28 H 0.39 -2.29 8.74 45.56 0.40 -1.89 16 29 H 0.10 -0.28 7.96 -51.93 -0.41 -0.69 16 30 H -0.25 -0.84 7.11 56.52 0.40 -0.44 16 31 H -0.25 -0.54 7.11 56.52 0.40 -0.13 16 32 H 0.16 0.03 8.06 -52.49 -0.42 -0.40 16 33 H 0.16 -0.20 7.24 -52.49 -0.38 -0.58 16 34 H 0.14 -0.36 6.95 -52.49 -0.36 -0.73 16 35 H 0.14 -0.47 6.38 -52.48 -0.33 -0.80 16 36 H 0.40 -0.85 4.87 -40.82 -0.20 -1.05 16 37 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 40 H 0.07 -0.19 6.51 -51.93 -0.34 -0.52 16 41 H 0.38 -1.46 9.08 45.56 0.41 -1.04 16 42 H 0.07 0.03 7.60 -51.93 -0.39 -0.36 16 43 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 44 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 45 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 46 H 0.40 -0.06 9.06 45.56 0.41 0.35 16 47 H 0.14 0.39 7.90 -52.48 -0.41 -0.02 16 LS Contribution 387.07 15.07 5.83 5.83 Total: 0.00 -12.09 387.07 -10.83 -22.93 By element: Atomic # 1 Polarization: -7.70 SS G_CDS: -4.59 Total: -12.29 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -4.79 Total: -3.19 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -0.23 Total: -0.15 kcal Atomic # 8 Polarization: -5.57 SS G_CDS: -1.60 Total: -7.17 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.46 Total: -5.96 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -12.09 -10.83 -22.93 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.285 kcal (2) G-P(sol) polarization free energy of solvation -12.095 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.832 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.927 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds